RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 ZBTB44Q8NCP5 570 aa12.01□□□□□ -0.49
UBE3B-209ENST00000539584 PXT1Q8NFP0 134 aa12.01□□□□□ -0.49
UBE3B-209ENST00000539584 OR5T2Q8NGG2 359 aa12.01□□□□□ -0.49
UBE3B-209ENST00000539584 TSEN15Q8WW01 171 aaKnown RBP12.01□□□□□ -0.49
UBE3B-209ENST00000539584 TSSK2Q96PF2 358 aa12.01□□□□□ -0.49
UBE3B-209ENST00000539584 MTIF3Q9H2K0 278 aaKnown RBP12.01□□□□□ -0.49
UBE3B-209ENST00000539584 COQ3Q9NZJ6 369 aa12.01□□□□□ -0.49
UBE3B-209ENST00000539584 H0Y8X5 98 aa12□□□□□ -0.49
UBE3B-209ENST00000539584 NUDT21O43809 227 aaKnown RBP12□□□□□ -0.49
UBE3B-209ENST00000539584 CDC123O75794 336 aaPredicted RBP12□□□□□ -0.49
UBE3B-209ENST00000539584 IL33O95760 270 aa12□□□□□ -0.49
UBE3B-209ENST00000539584 OR4E1P0C645 316 aa12□□□□□ -0.49
UBE3B-209ENST00000539584 SLC25A4P12235 298 aa12□□□□□ -0.49
UBE3B-209ENST00000539584 FSTP19883 344 aa12□□□□□ -0.49
UBE3B-209ENST00000539584 POU3F2P20265 443 aaPredicted RBP12□□□□□ -0.49
UBE3B-209ENST00000539584 TPMTP51580 245 aa12□□□□□ -0.49
UBE3B-209ENST00000539584 EGR4Q05215 589 aa12□□□□□ -0.49
UBE3B-209ENST00000539584 DMWDQ09019 674 aa12□□□□□ -0.49
UBE3B-209ENST00000539584 SLC17A1Q14916 467 aa12□□□□□ -0.49
UBE3B-209ENST00000539584 GXYLT1Q4G148 440 aa12□□□□□ -0.49
UBE3B-209ENST00000539584 OR7E24Q6IFN5 339 aa12□□□□□ -0.49
UBE3B-209ENST00000539584 LIN54Q6MZP7 749 aa12□□□□□ -0.49
UBE3B-209ENST00000539584 TMEM17Q86X19 198 aa12□□□□□ -0.49
UBE3B-209ENST00000539584 MCATQ8IVS2 390 aaKnown RBP12□□□□□ -0.49
UBE3B-209ENST00000539584 CCDC36Q8IYA8 594 aa12□□□□□ -0.49
UBE3B-209ENST00000539584 ESX1Q8N693 406 aa12□□□□□ -0.49
UBE3B-209ENST00000539584 RNF128Q8TEB7 428 aa12□□□□□ -0.49
UBE3B-209ENST00000539584 MOGAT1Q96PD6 335 aa12□□□□□ -0.49
UBE3B-209ENST00000539584 TSPAN32Q96QS1 320 aa12□□□□□ -0.49
UBE3B-209ENST00000539584 ADAM19Q9H013 955 aa12□□□□□ -0.49
UBE3B-209ENST00000539584 TMEM82A0PJX8 343 aa11.99□□□□□ -0.49
UBE3B-209ENST00000539584 XKRYO14609 159 aa11.99□□□□□ -0.49
UBE3B-209ENST00000539584 AKR7A3O95154 331 aa11.99□□□□□ -0.49
UBE3B-209ENST00000539584 RAB3DO95716 219 aa11.99□□□□□ -0.49
UBE3B-209ENST00000539584 MT-ATP6P00846 226 aa11.99□□□□□ -0.49
UBE3B-209ENST00000539584 CD3DP04234 171 aa11.99□□□□□ -0.49
UBE3B-209ENST00000539584 ITGA5P08648 1049 aa11.99□□□□□ -0.49
UBE3B-209ENST00000539584 HLA-GP17693 338 aa11.99□□□□□ -0.49
UBE3B-209ENST00000539584 RABIFP47224 123 aa11.99□□□□□ -0.49
UBE3B-209ENST00000539584 WDR38Q5JTN6 314 aa11.99□□□□□ -0.49
UBE3B-209ENST00000539584 SLC18B1Q6NT16 456 aa11.99□□□□□ -0.49
UBE3B-209ENST00000539584 ZNF546Q86UE3 836 aa11.99□□□□□ -0.49
UBE3B-209ENST00000539584 C19orf47Q8N9M1 422 aaKnown RBP11.99□□□□□ -0.49
UBE3B-209ENST00000539584 PHOSPHO1Q8TCT1 267 aa11.99□□□□□ -0.49
UBE3B-209ENST00000539584 CDCA3Q99618 268 aaPredicted RBP11.99□□□□□ -0.49
UBE3B-209ENST00000539584 EDEM2Q9BV94 578 aa11.99□□□□□ -0.49
UBE3B-209ENST00000539584 LAT2Q9GZY6 243 aa11.99□□□□□ -0.49
UBE3B-209ENST00000539584 RASL12Q9NYN1 266 aa11.99□□□□□ -0.49
UBE3B-209ENST00000539584 TGFBR3LH3BV60 316 aa11.99□□□□□ -0.49
UBE3B-209ENST00000539584 HRKO00198 91 aa11.99□□□□□ -0.49
UBE3B-209ENST00000539584 DCTN6O00399 190 aa11.99□□□□□ -0.49
UBE3B-209ENST00000539584 SIX6O95475 246 aa11.99□□□□□ -0.49
UBE3B-209ENST00000539584 CD74P04233 296 aa11.99□□□□□ -0.49
UBE3B-209ENST00000539584 F13BP05160 661 aa11.99□□□□□ -0.49
UBE3B-209ENST00000539584 MPZP25189 248 aa11.99□□□□□ -0.49
UBE3B-209ENST00000539584 CCKBRP32239 447 aa11.99□□□□□ -0.49
UBE3B-209ENST00000539584 KIR3DL2P43630 455 aa11.99□□□□□ -0.49
UBE3B-209ENST00000539584 PPICP45877 212 aa11.99□□□□□ -0.49
UBE3B-209ENST00000539584 MEF2DQ14814 521 aa11.99□□□□□ -0.49
UBE3B-209ENST00000539584 C2orf68Q2NKX9 166 aa11.99□□□□□ -0.49
UBE3B-209ENST00000539584 UQCC3Q6UW78 93 aa11.99□□□□□ -0.49
UBE3B-209ENST00000539584 MED25Q71SY5 747 aa11.99□□□□□ -0.49
UBE3B-209ENST00000539584 BEST3Q8N1M1 668 aa11.99□□□□□ -0.49
UBE3B-209ENST00000539584 KCNRGQ8N5I3 272 aa11.99□□□□□ -0.49
UBE3B-209ENST00000539584 OR4D10Q8NGI6 311 aa11.99□□□□□ -0.49
UBE3B-209ENST00000539584 ST8SIA2Q92186 375 aa11.99□□□□□ -0.49
UBE3B-209ENST00000539584 BADQ92934 168 aa11.99□□□□□ -0.49
UBE3B-209ENST00000539584 ARPC5LQ9BPX5 153 aa11.99□□□□□ -0.49
UBE3B-209ENST00000539584 GPR174Q9BXC1 333 aa11.99□□□□□ -0.49
UBE3B-209ENST00000539584 SLC6A17Q9H1V8 727 aa11.99□□□□□ -0.49
UBE3B-209ENST00000539584 ATG5Q9H1Y0 275 aa11.99□□□□□ -0.49
UBE3B-209ENST00000539584 S1PR5Q9H228 398 aa11.99□□□□□ -0.49
UBE3B-209ENST00000539584 POFUT1Q9H488 388 aa11.99□□□□□ -0.49
UBE3B-209ENST00000539584 STARD5Q9NSY2 213 aa11.99□□□□□ -0.49
UBE3B-209ENST00000539584 SLC2A8Q9NY64 477 aa11.99□□□□□ -0.49
UBE3B-209ENST00000539584 WSB2Q9NYS7 404 aaPredicted RBP11.99□□□□□ -0.49
UBE3B-209ENST00000539584 ZNF346Q9UL40 294 aaKnown RBP11.99□□□□□ -0.49
UBE3B-209ENST00000539584 DHDHQ9UQ10 334 aa11.99□□□□□ -0.49
UBE3B-209ENST00000539584 CLDN16Q9Y5I7 305 aa11.99□□□□□ -0.49
UBE3B-209ENST00000539584 C2orf16Q68DN1 1984 aa11.98□□□□□ -0.49
UBE3B-209ENST00000539584 A0A0A6YYC8 382 aaPredicted RBP11.98□□□□□ -0.49
UBE3B-209ENST00000539584 A0A1B0GTI1 187 aa11.98□□□□□ -0.49
UBE3B-209ENST00000539584 TMEM272A0A1B0GTI8 110 aa11.98□□□□□ -0.49
UBE3B-209ENST00000539584 TVP23AA6NH52 213 aa11.98□□□□□ -0.49
UBE3B-209ENST00000539584 MPTX1A8MV57 137 aa11.98□□□□□ -0.49
UBE3B-209ENST00000539584 I3L1I5 382 aaPredicted RBP11.98□□□□□ -0.49
UBE3B-209ENST00000539584 DOK2O60496 412 aa11.98□□□□□ -0.49
UBE3B-209ENST00000539584 CYB5AP00167 134 aa11.98□□□□□ -0.49
UBE3B-209ENST00000539584 PGDP52209 483 aa11.98□□□□□ -0.49
UBE3B-209ENST00000539584 EFNB2P52799 333 aa11.98□□□□□ -0.49
UBE3B-209ENST00000539584 SORDQ00796 357 aa11.98□□□□□ -0.49
UBE3B-209ENST00000539584 ARHGAP40Q5TG30 622 aa11.98□□□□□ -0.49
UBE3B-209ENST00000539584 DCAF12L2Q5VW00 463 aa11.98□□□□□ -0.49
UBE3B-209ENST00000539584 MOB3CQ70IA8 216 aa11.98□□□□□ -0.49
UBE3B-209ENST00000539584 SPRED2Q7Z698 418 aa11.98□□□□□ -0.49
UBE3B-209ENST00000539584 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.98□□□□□ -0.49
UBE3B-209ENST00000539584 SHISA5Q8N114 240 aa11.98□□□□□ -0.49
UBE3B-209ENST00000539584 OR5M8Q8NGP6 311 aa11.98□□□□□ -0.49
UBE3B-209ENST00000539584 OR1J4Q8NGS1 313 aa11.98□□□□□ -0.49
UBE3B-209ENST00000539584 SLC37A2Q8TED4 501 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms