RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 CCDC3Q9BQI4 270 aa18.38■□□□□ 0.53
TMEM260-203ENST00000539559 ATG5Q9H1Y0 275 aa18.38■□□□□ 0.53
TMEM260-203ENST00000539559 SYT4Q9H2B2 425 aa18.38■□□□□ 0.53
TMEM260-203ENST00000539559 KCNG2Q9UJ96 466 aa18.38■□□□□ 0.53
TMEM260-203ENST00000539559 LOC100509620A0A075B734 347 aa18.38■□□□□ 0.53
TMEM260-203ENST00000539559 SERINC4A6NH21 518 aa18.38■□□□□ 0.53
TMEM260-203ENST00000539559 KCNJ13O60928 360 aa18.38■□□□□ 0.53
TMEM260-203ENST00000539559 CSF1P09603 554 aa18.38■□□□□ 0.53
TMEM260-203ENST00000539559 SLC35E2P0CK97 266 aa18.38■□□□□ 0.53
TMEM260-203ENST00000539559 AKAIN1P0CW23 69 aa18.38■□□□□ 0.53
TMEM260-203ENST00000539559 NTSR1P30989 418 aa18.38■□□□□ 0.53
TMEM260-203ENST00000539559 KIR3DL2P43630 455 aa18.38■□□□□ 0.53
TMEM260-203ENST00000539559 CENPAP49450 140 aa18.38■□□□□ 0.53
TMEM260-203ENST00000539559 DMWDQ09019 674 aa18.38■□□□□ 0.53
TMEM260-203ENST00000539559 CD226Q15762 336 aa18.38■□□□□ 0.53
TMEM260-203ENST00000539559 ZNF542PQ5EBM4 170 aa18.38■□□□□ 0.53
TMEM260-203ENST00000539559 LY6G6FQ5SQ64 297 aa18.38■□□□□ 0.53
TMEM260-203ENST00000539559 HSD17B13Q7Z5P4 300 aaPredicted RBP18.38■□□□□ 0.53
TMEM260-203ENST00000539559 METTL27Q8N6F8 245 aaPredicted RBP18.38■□□□□ 0.53
TMEM260-203ENST00000539559 EXD3Q8N9H8 876 aa18.38■□□□□ 0.53
TMEM260-203ENST00000539559 SEC22AQ96IW7 307 aa18.38■□□□□ 0.53
TMEM260-203ENST00000539559 TINAGL1Q9GZM7 467 aaPredicted RBP18.38■□□□□ 0.53
TMEM260-203ENST00000539559 SPTBN5Q9NRC6 3674 aaKnown RBP18.38■□□□□ 0.53
TMEM260-203ENST00000539559 DNASE2O00115 360 aaPredicted RBP18.37■□□□□ 0.53
TMEM260-203ENST00000539559 KCNAB3O43448 404 aa18.37■□□□□ 0.53
TMEM260-203ENST00000539559 GMFBP60983 142 aa18.37■□□□□ 0.53
TMEM260-203ENST00000539559 MESTQ5EB52 335 aa18.37■□□□□ 0.53
TMEM260-203ENST00000539559 WDR38Q5JTN6 314 aa18.37■□□□□ 0.53
TMEM260-203ENST00000539559 STEAP1BQ6NZ63 245 aa18.37■□□□□ 0.53
TMEM260-203ENST00000539559 ZNF546Q86UE3 836 aa18.37■□□□□ 0.53
TMEM260-203ENST00000539559 CDC20BQ86Y33 519 aa18.37■□□□□ 0.53
TMEM260-203ENST00000539559 GALNT16Q8N428 558 aa18.37■□□□□ 0.53
TMEM260-203ENST00000539559 PXT1Q8NFP0 134 aa18.37■□□□□ 0.53
TMEM260-203ENST00000539559 LRRC46Q96FV0 321 aa18.37■□□□□ 0.53
TMEM260-203ENST00000539559 SCARF2Q96GP6 870 aaPredicted RBP18.37■□□□□ 0.53
TMEM260-203ENST00000539559 RBM18Q96H35 190 aaKnown RBP18.37■□□□□ 0.53
TMEM260-203ENST00000539559 TMEM185BQ9H7F4 350 aa18.37■□□□□ 0.53
TMEM260-203ENST00000539559 HRASLS2Q9NWW9 162 aa18.37■□□□□ 0.53
TMEM260-203ENST00000539559 NPIPB9F8W1W9 429 aa18.37■□□□□ 0.53
TMEM260-203ENST00000539559 ALOX12BO75342 701 aa18.37■□□□□ 0.53
TMEM260-203ENST00000539559 CD14P08571 375 aa18.37■□□□□ 0.53
TMEM260-203ENST00000539559 CT45A8P0DMV1 189 aa18.37■□□□□ 0.53
TMEM260-203ENST00000539559 CT45A9P0DMV2 189 aa18.37■□□□□ 0.53
TMEM260-203ENST00000539559 PRSS3P35030 304 aa18.37■□□□□ 0.53
TMEM260-203ENST00000539559 CT45A2Q5DJT8 189 aa18.37■□□□□ 0.53
TMEM260-203ENST00000539559 LIN54Q6MZP7 749 aa18.37■□□□□ 0.53
TMEM260-203ENST00000539559 BCORP1Q8N888 145 aa18.37■□□□□ 0.53
TMEM260-203ENST00000539559 BAHD1Q8TBE0 780 aaPredicted RBP18.37■□□□□ 0.53
TMEM260-203ENST00000539559 LPAR4Q99677 370 aa18.37■□□□□ 0.53
TMEM260-203ENST00000539559 LMF2Q9BU23 707 aaKnown RBP18.37■□□□□ 0.53
TMEM260-203ENST00000539559 ERVK-19Q9WJR5 959 aa18.37■□□□□ 0.53
TMEM260-203ENST00000539559 FARSAQ9Y285 508 aaKnown RBP18.37■□□□□ 0.53
TMEM260-203ENST00000539559 GLULP15104 373 aa18.36■□□□□ 0.53
TMEM260-203ENST00000539559 MNDAP41218 407 aa18.36■□□□□ 0.53
TMEM260-203ENST00000539559 PRPS1P60891 318 aa18.36■□□□□ 0.53
TMEM260-203ENST00000539559 NR0B2Q15466 257 aa18.36■□□□□ 0.53
TMEM260-203ENST00000539559 ZNF141Q15928 474 aa18.36■□□□□ 0.53
TMEM260-203ENST00000539559 ZNF74Q16587 644 aa18.36■□□□□ 0.53
TMEM260-203ENST00000539559 ZNF627Q7L945 461 aa18.36■□□□□ 0.53
TMEM260-203ENST00000539559 SLC43A2Q8N370 569 aa18.36■□□□□ 0.53
TMEM260-203ENST00000539559 GPR148Q8TDV2 347 aa18.36■□□□□ 0.53
TMEM260-203ENST00000539559 KTI12Q96EK9 354 aaPredicted RBP18.36■□□□□ 0.53
TMEM260-203ENST00000539559 COMMD4Q9H0A8 199 aa18.36■□□□□ 0.53
TMEM260-203ENST00000539559 TRBV5-7A0A0A0MS05 114 aa18.36■□□□□ 0.53
TMEM260-203ENST00000539559 APBB3O95704 486 aa18.36■□□□□ 0.53
TMEM260-203ENST00000539559 OR4E1P0C645 316 aa18.36■□□□□ 0.53
TMEM260-203ENST00000539559 MAOAP21397 527 aa18.36■□□□□ 0.53
TMEM260-203ENST00000539559 AKR1C2P52895 323 aa18.36■□□□□ 0.53
TMEM260-203ENST00000539559 AKR1C1Q04828 323 aa18.36■□□□□ 0.53
TMEM260-203ENST00000539559 RPL18Q07020 188 aaKnown RBP18.36■□□□□ 0.53
TMEM260-203ENST00000539559 SQSTM1Q13501 440 aa18.36■□□□□ 0.53
TMEM260-203ENST00000539559 ASPHD2Q6ICH7 369 aa18.36■□□□□ 0.53
TMEM260-203ENST00000539559 OR10K2Q6IF99 312 aa18.36■□□□□ 0.53
TMEM260-203ENST00000539559 KRT77Q7Z794 578 aa18.36■□□□□ 0.53
TMEM260-203ENST00000539559 ZNF595Q8IYB9 648 aa18.36■□□□□ 0.53
TMEM260-203ENST00000539559 PM20D2Q8IYS1 436 aa18.36■□□□□ 0.53
TMEM260-203ENST00000539559 CLEC1AQ8NC01 280 aa18.36■□□□□ 0.53
TMEM260-203ENST00000539559 OR1J2Q8NGS2 313 aa18.36■□□□□ 0.53
TMEM260-203ENST00000539559 OR6K3Q8NGY3 331 aa18.36■□□□□ 0.53
TMEM260-203ENST00000539559 C16orf52Q8NHV5 167 aa18.36■□□□□ 0.53
TMEM260-203ENST00000539559 FAM3DQ96BQ1 224 aa18.36■□□□□ 0.53
TMEM260-203ENST00000539559 TSPAN32Q96QS1 320 aa18.36■□□□□ 0.53
TMEM260-203ENST00000539559 GRHPRQ9UBQ7 328 aa18.36■□□□□ 0.53
TMEM260-203ENST00000539559 ZNF254O75437 659 aa18.36■□□□□ 0.53
TMEM260-203ENST00000539559 CSF2RBP32927 897 aa18.36■□□□□ 0.53
TMEM260-203ENST00000539559 LUMP51884 338 aaPredicted RBP18.36■□□□□ 0.53
TMEM260-203ENST00000539559 TMEM196Q5HYL7 178 aa18.36■□□□□ 0.53
TMEM260-203ENST00000539559 PARGQ86W56 976 aa18.36■□□□□ 0.53
TMEM260-203ENST00000539559 GABRG1Q8N1C3 465 aa18.36■□□□□ 0.53
TMEM260-203ENST00000539559 GABRG3Q99928 467 aa18.36■□□□□ 0.53
TMEM260-203ENST00000539559 Q9N2J8 555 aa18.36■□□□□ 0.53
TMEM260-203ENST00000539559 TAS2R3Q9NYW6 316 aa18.36■□□□□ 0.53
TMEM260-203ENST00000539559 C11orf98E9PRG8 122 aa18.35■□□□□ 0.53
TMEM260-203ENST00000539559 WNT11O96014 354 aa18.35■□□□□ 0.53
TMEM260-203ENST00000539559 PLGP00747 810 aaPredicted RBP18.35■□□□□ 0.53
TMEM260-203ENST00000539559 HLA-DQA2P01906 255 aa18.35■□□□□ 0.53
TMEM260-203ENST00000539559 COL9A1P20849 921 aa18.35■□□□□ 0.53
TMEM260-203ENST00000539559 SDHAP31040 664 aa18.35■□□□□ 0.53
TMEM260-203ENST00000539559 RAB38P57729 211 aa18.35■□□□□ 0.53
TMEM260-203ENST00000539559 EGR4Q05215 589 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms