RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 G3V3Q6 166 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 SOCS6O14544 535 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 GPR171O14626 319 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 FRS3O43559 492 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 GATCO43716 136 aaKnown RBP6.38□□□□□ -1.39
SORT1-209ENST00000538502 KLF8O95600 359 aaPredicted RBP6.38□□□□□ -1.39
SORT1-209ENST00000538502 AIFM1O95831 613 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 CD37P11049 281 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 CBR1P16152 277 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 RPL12P30050 165 aaKnown RBP6.38□□□□□ -1.39
SORT1-209ENST00000538502 VIPR2P41587 438 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 RAD52P43351 418 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 TGFBR3Q03167 851 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 PNLIPRP3Q17RR3 467 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 GRASPQ7Z6J2 395 aaPredicted RBP6.38□□□□□ -1.39
SORT1-209ENST00000538502 PNPLA1Q8N8W4 532 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 DTWD2Q8NBA8 298 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 ZNF480Q8WV37 535 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 RTP3Q9BQQ7 232 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 VAMP8Q9BV40 100 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 CBY3A6NI87 242 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 CD14P08571 375 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 OR4E1P0C645 316 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 RPL13AP40429 203 aaKnown RBP6.38□□□□□ -1.39
SORT1-209ENST00000538502 TMEM183BQ1AE95 376 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 TMEM201Q5SNT2 666 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 Q6ZSR9 355 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 PIANPQ8IYJ0 282 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 OR4D10Q8NGI6 311 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 SLCO4A1Q96BD0 722 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 ATF6BQ99941 703 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 SOX7Q9BT81 388 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 PLK3Q9H4B4 646 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 ZNF768Q9H5H4 540 aaKnown RBP6.38□□□□□ -1.39
SORT1-209ENST00000538502 C5AR2Q9P296 337 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 DNMT3BQ9UBC3 853 aaKnown RBP6.38□□□□□ -1.39
SORT1-209ENST00000538502 DNAJB11Q9UBS4 358 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 APOBEC3BQ9UH17 382 aaKnown RBP6.38□□□□□ -1.39
SORT1-209ENST00000538502 CLEC2DQ9UHP7 191 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 TMEM184BQ9Y519 407 aaPredicted RBP6.38□□□□□ -1.39
SORT1-209ENST00000538502 PRSS21Q9Y6M0 314 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 TNFSF12O43508 249 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 ACSM4P0C7M7 580 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 MSX1P28360 303 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 CD80P33681 288 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 NPBWR1P48145 328 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 ZNF90Q03938 601 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 PKDCCQ504Y2 493 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 GLDNQ6ZMI3 551 aaPredicted RBP6.38□□□□□ -1.39
SORT1-209ENST00000538502 HSD17B13Q7Z5P4 300 aaPredicted RBP6.38□□□□□ -1.39
SORT1-209ENST00000538502 DCBLD2Q96PD2 775 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 TECTBQ96PL2 329 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 ARHGAP9Q9BRR9 750 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 KLF16Q9BXK1 252 aaPredicted RBP6.38□□□□□ -1.39
SORT1-209ENST00000538502 CHST8Q9H2A9 424 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 TRAPPC2LQ9UL33 140 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 USP3Q9Y6I4 520 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 NPIPA5A0A0B4J1W7 369 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 SLC5A10A0PJK1 596 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 RAB27BO00194 218 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 ZNF217O75362 1048 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 CTSLP07711 333 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 OR1D4P47884 311 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 GLYATL3Q5SZD4 288 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 FAM71E1Q6IPT2 247 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 HTR3DQ70Z44 454 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 PRR18Q8N4B5 295 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 OR52E1Q8NGJ3 308 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 OR13C9Q8NGT0 318 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 OR6S1Q8NH40 331 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 CIB3Q96Q77 187 aaPredicted RBP6.38□□□□□ -1.39
SORT1-209ENST00000538502 VSX1Q9NZR4 365 aaPredicted RBP6.38□□□□□ -1.39
SORT1-209ENST00000538502 PADI1Q9ULC6 663 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 TMEM88BA6NKF7 163 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 ZNF727A8MUV8 499 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 OMGP23515 440 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 CCKARP32238 428 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 HNRNPA3P51991 378 aaKnown RBP6.38□□□□□ -1.39
SORT1-209ENST00000538502 SUB1P53999 127 aaKnown RBP eCLIP6.38□□□□□ -1.39
SORT1-209ENST00000538502 SEMA3BQ13214 749 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 TPBGQ13641 420 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 RAB6CQ53S08 254 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 LYRM7Q5U5X0 104 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 NCR3LG1Q68D85 454 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 B3GNT9Q6UX72 402 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 SYT9Q86SS6 491 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 TP53INP2Q8IXH6 220 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 HSD17B11Q8NBQ5 300 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 PCNPQ8WW12 178 aaKnown RBP6.38□□□□□ -1.39
SORT1-209ENST00000538502 ZFPM2Q8WW38 1151 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 OPALINQ96PE5 141 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 TNFRSF13CQ96RJ3 184 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 APOOQ9BUR5 198 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 RAB6CQ9H0N0 254 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 OCEL1Q9H607 264 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 MED20Q9H944 212 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 TM7SF3Q9NS93 570 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 ACER3Q9NUN7 267 aa6.38□□□□□ -1.39
SORT1-209ENST00000538502 OR14J1Q9UGF5 321 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms