RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 CDK20Q8IZL9 346 aa11.42□□□□□ -0.58
CHFR-216ENST00000538235 SDR9C7Q8NEX9 313 aa11.42□□□□□ -0.58
CHFR-216ENST00000538235 OR4K13Q8NH42 304 aa11.42□□□□□ -0.58
CHFR-216ENST00000538235 OR5K1Q8NHB7 308 aa11.42□□□□□ -0.58
CHFR-216ENST00000538235 NSMAFQ92636 917 aa11.42□□□□□ -0.58
CHFR-216ENST00000538235 POP5Q969H6 163 aaKnown RBP11.42□□□□□ -0.58
CHFR-216ENST00000538235 ERMAPQ96PL5 475 aaPredicted RBP11.42□□□□□ -0.58
CHFR-216ENST00000538235 FOXB1Q99853 325 aa11.42□□□□□ -0.58
CHFR-216ENST00000538235 HCAR1Q9BXC0 346 aa11.42□□□□□ -0.58
CHFR-216ENST00000538235 SYT4Q9H2B2 425 aa11.42□□□□□ -0.58
CHFR-216ENST00000538235 S100A14Q9HCY8 104 aa11.42□□□□□ -0.58
CHFR-216ENST00000538235 RASSF1Q9NS23 344 aa11.42□□□□□ -0.58
CHFR-216ENST00000538235 B3GNT2Q9NY97 397 aa11.42□□□□□ -0.58
CHFR-216ENST00000538235 OAZ3Q9UMX2 235 aa11.42□□□□□ -0.58
CHFR-216ENST00000538235 MGAT4BQ9UQ53 548 aa11.42□□□□□ -0.58
CHFR-216ENST00000538235 ARPC4-TTLL3A0A0A6YYG9 625 aa11.41□□□□□ -0.58
CHFR-216ENST00000538235 IGLV1-36A0A0B4J1U3 117 aa11.41□□□□□ -0.58
CHFR-216ENST00000538235 PRSS37A4D1T9 235 aa11.41□□□□□ -0.58
CHFR-216ENST00000538235 OR6C68A6NDL8 312 aa11.41□□□□□ -0.58
CHFR-216ENST00000538235 M0R129 80 aa11.41□□□□□ -0.58
CHFR-216ENST00000538235 GNGT2O14610 69 aa11.41□□□□□ -0.58
CHFR-216ENST00000538235 ARPC3O15145 178 aa11.41□□□□□ -0.58
CHFR-216ENST00000538235 E2F6O75461 281 aa11.41□□□□□ -0.58
CHFR-216ENST00000538235 KRT33AO76009 404 aa11.41□□□□□ -0.58
CHFR-216ENST00000538235 HLA-HP01893 362 aa11.41□□□□□ -0.58
CHFR-216ENST00000538235 FASP25445 335 aa11.41□□□□□ -0.58
CHFR-216ENST00000538235 NOS3P29474 1203 aa11.41□□□□□ -0.58
CHFR-216ENST00000538235 SLC6A6P31641 620 aa11.41□□□□□ -0.58
CHFR-216ENST00000538235 ZNF83P51522 516 aa11.41□□□□□ -0.58
CHFR-216ENST00000538235 BSPH1Q075Z2 132 aa11.41□□□□□ -0.58
CHFR-216ENST00000538235 CD47Q08722 323 aa11.41□□□□□ -0.58
CHFR-216ENST00000538235 TMEM236Q5W0B7 351 aa11.41□□□□□ -0.58
CHFR-216ENST00000538235 ACSM5Q6NUN0 579 aa11.41□□□□□ -0.58
CHFR-216ENST00000538235 UGT2A3Q6UWM9 527 aa11.41□□□□□ -0.58
CHFR-216ENST00000538235 ZNF813Q6ZN06 617 aa11.41□□□□□ -0.58
CHFR-216ENST00000538235 ZNF584Q8IVC4 421 aa11.41□□□□□ -0.58
CHFR-216ENST00000538235 CYB561A3Q8NBI2 242 aa11.41□□□□□ -0.58
CHFR-216ENST00000538235 KBTBD8Q8NFY9 601 aa11.41□□□□□ -0.58
CHFR-216ENST00000538235 PIK3IP1Q96FE7 263 aa11.41□□□□□ -0.58
CHFR-216ENST00000538235 LRRC46Q96FV0 321 aa11.41□□□□□ -0.58
CHFR-216ENST00000538235 PLPPR2Q96GM1 343 aa11.41□□□□□ -0.58
CHFR-216ENST00000538235 NMNAT3Q96T66 252 aa11.41□□□□□ -0.58
CHFR-216ENST00000538235 SH3GL3Q99963 347 aa11.41□□□□□ -0.58
CHFR-216ENST00000538235 TMEM204Q9BSN7 226 aa11.41□□□□□ -0.58
CHFR-216ENST00000538235 ALG12Q9BV10 488 aa11.41□□□□□ -0.58
CHFR-216ENST00000538235 IFT27Q9BW83 186 aa11.41□□□□□ -0.58
CHFR-216ENST00000538235 TBC1D23Q9NUY8 699 aa11.41□□□□□ -0.58
CHFR-216ENST00000538235 VSX1Q9NZR4 365 aaPredicted RBP11.41□□□□□ -0.58
CHFR-216ENST00000538235 CHD3Q12873 2000 aaKnown RBP11.4□□□□□ -0.58
CHFR-216ENST00000538235 IGHV1-18A0A0C4DH31 117 aa11.4□□□□□ -0.58
CHFR-216ENST00000538235 OR6C65A6NJZ3 312 aa11.4□□□□□ -0.58
CHFR-216ENST00000538235 CENPBD1B2RD01 187 aa11.4□□□□□ -0.58
CHFR-216ENST00000538235 MGRN1O60291 552 aa11.4□□□□□ -0.58
CHFR-216ENST00000538235 MPZL1O95297 269 aa11.4□□□□□ -0.58
CHFR-216ENST00000538235 MMP7P09237 267 aaPredicted RBP11.4□□□□□ -0.58
CHFR-216ENST00000538235 GAAP10253 952 aa11.4□□□□□ -0.58
CHFR-216ENST00000538235 CLUP10909 449 aa11.4□□□□□ -0.58
CHFR-216ENST00000538235 APEHP13798 732 aaKnown RBP11.4□□□□□ -0.58
CHFR-216ENST00000538235 PPP3CBP16298 524 aa11.4□□□□□ -0.58
CHFR-216ENST00000538235 POLR2IP36954 125 aaKnown RBP11.4□□□□□ -0.58
CHFR-216ENST00000538235 PPP2R2BQ00005 443 aa11.4□□□□□ -0.58
CHFR-216ENST00000538235 ENDOGQ14249 297 aaKnown RBP11.4□□□□□ -0.58
CHFR-216ENST00000538235 GK3PQ14409 553 aa11.4□□□□□ -0.58
CHFR-216ENST00000538235 TAF11Q15544 211 aa11.4□□□□□ -0.58
CHFR-216ENST00000538235 PGGHGQ32M88 737 aa11.4□□□□□ -0.58
CHFR-216ENST00000538235 NCMAPQ5T1S8 102 aa11.4□□□□□ -0.58
CHFR-216ENST00000538235 KDM4DQ6B0I6 523 aa11.4□□□□□ -0.58
CHFR-216ENST00000538235 ANKRD16Q6P6B7 361 aa11.4□□□□□ -0.58
CHFR-216ENST00000538235 MDP1Q86V88 176 aa11.4□□□□□ -0.58
CHFR-216ENST00000538235 CDC20BQ86Y33 519 aa11.4□□□□□ -0.58
CHFR-216ENST00000538235 LNX2Q8N448 690 aa11.4□□□□□ -0.58
CHFR-216ENST00000538235 C17orf78Q8N4C9 275 aa11.4□□□□□ -0.58
CHFR-216ENST00000538235 LINC00471Q8N535 108 aa11.4□□□□□ -0.58
CHFR-216ENST00000538235 NPEPL1Q8NDH3 523 aa11.4□□□□□ -0.58
CHFR-216ENST00000538235 ICA1LQ8NDH6 482 aa11.4□□□□□ -0.58
CHFR-216ENST00000538235 MS4A3Q96HJ5 214 aa11.4□□□□□ -0.58
CHFR-216ENST00000538235 TSSK6Q9BXA6 273 aa11.4□□□□□ -0.58
CHFR-216ENST00000538235 HDHD5Q9BXW7 423 aa11.4□□□□□ -0.58
CHFR-216ENST00000538235 NUAK2Q9H093 628 aa11.4□□□□□ -0.58
CHFR-216ENST00000538235 PLEKHF2Q9H8W4 249 aa11.4□□□□□ -0.58
CHFR-216ENST00000538235 EMC7Q9NPA0 242 aa11.4□□□□□ -0.58
CHFR-216ENST00000538235 KRCC1Q9NPI7 259 aaPredicted RBP11.4□□□□□ -0.58
CHFR-216ENST00000538235 GRHPRQ9UBQ7 328 aa11.4□□□□□ -0.58
CHFR-216ENST00000538235 NDRG3Q9UGV2 375 aa11.4□□□□□ -0.58
CHFR-216ENST00000538235 ARFGEF3Q5TH69 2177 aa11.4□□□□□ -0.59
CHFR-216ENST00000538235 FAM171A2A8MVW0 826 aa11.39□□□□□ -0.59
CHFR-216ENST00000538235 SHISA9B4DS77 424 aa11.39□□□□□ -0.59
CHFR-216ENST00000538235 WNT11O96014 354 aa11.39□□□□□ -0.59
CHFR-216ENST00000538235 IGLV1-44P01699 117 aa11.39□□□□□ -0.59
CHFR-216ENST00000538235 ZNF23P17027 643 aa11.39□□□□□ -0.59
CHFR-216ENST00000538235 CALCRP30988 508 aa11.39□□□□□ -0.59
CHFR-216ENST00000538235 IFNGR2P38484 337 aa11.39□□□□□ -0.59
CHFR-216ENST00000538235 SH3BGRP55822 239 aaPredicted RBP11.39□□□□□ -0.59
CHFR-216ENST00000538235 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.39□□□□□ -0.59
CHFR-216ENST00000538235 CRMP1Q14194 572 aa11.39□□□□□ -0.59
CHFR-216ENST00000538235 MEP1BQ16820 701 aa11.39□□□□□ -0.59
CHFR-216ENST00000538235 GPR139Q6DWJ6 353 aa11.39□□□□□ -0.59
CHFR-216ENST00000538235 ADAM5Q6NVV9 412 aa11.39□□□□□ -0.59
CHFR-216ENST00000538235 LEG1Q6P5S2 330 aa11.39□□□□□ -0.59
CHFR-216ENST00000538235 OR6V1Q8N148 313 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms