RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 MEP1BQ16820 701 aa13.83□□□□□ -0.2
SFSWAP-206ENST00000537582 RBM48Q5RL73 367 aaKnown RBP13.83□□□□□ -0.2
SFSWAP-206ENST00000537582 GTF2IRD2BQ6EKJ0 949 aa13.83□□□□□ -0.2
SFSWAP-206ENST00000537582 SLC25A47Q6Q0C1 308 aa13.83□□□□□ -0.2
SFSWAP-206ENST00000537582 HDDC2Q7Z4H3 204 aa13.83□□□□□ -0.2
SFSWAP-206ENST00000537582 GTF2IRD2Q86UP8 949 aa13.83□□□□□ -0.2
SFSWAP-206ENST00000537582 OR4F15Q8NGB8 312 aa13.83□□□□□ -0.2
SFSWAP-206ENST00000537582 OR51G2Q8NGK0 314 aa13.83□□□□□ -0.2
SFSWAP-206ENST00000537582 OR2T4Q8NH00 348 aa13.83□□□□□ -0.2
SFSWAP-206ENST00000537582 LGALS12Q96DT0 336 aa13.83□□□□□ -0.2
SFSWAP-206ENST00000537582 TP63Q9H3D4 680 aaPredicted RBP13.83□□□□□ -0.2
SFSWAP-206ENST00000537582 ZNF696Q9H7X3 374 aa13.83□□□□□ -0.2
SFSWAP-206ENST00000537582 PLCXD1Q9NUJ7 323 aa13.83□□□□□ -0.2
SFSWAP-206ENST00000537582 TAS2R16Q9NYV7 291 aa13.83□□□□□ -0.2
SFSWAP-206ENST00000537582 MYRFQ9Y2G1 1151 aa13.83□□□□□ -0.2
SFSWAP-206ENST00000537582 UGT2A1Q9Y4X1 527 aa13.83□□□□□ -0.2
SFSWAP-206ENST00000537582 FKBP7Q9Y680 259 aa13.83□□□□□ -0.2
SFSWAP-206ENST00000537582 MED12LQ86YW9 2145 aa13.82□□□□□ -0.2
SFSWAP-206ENST00000537582 AKAP8O43823 692 aaKnown RBP13.82□□□□□ -0.2
SFSWAP-206ENST00000537582 SELENOFO60613 162 aa13.82□□□□□ -0.2
SFSWAP-206ENST00000537582 TNFSF13O75888 250 aa13.82□□□□□ -0.2
SFSWAP-206ENST00000537582 SEC14L2O76054 403 aa13.82□□□□□ -0.2
SFSWAP-206ENST00000537582 GLCEO94923 617 aa13.82□□□□□ -0.2
SFSWAP-206ENST00000537582 CCDC159P0C7I6 412 aa13.82□□□□□ -0.2
SFSWAP-206ENST00000537582 PTGER4P35408 488 aa13.82□□□□□ -0.2
SFSWAP-206ENST00000537582 NAA10P41227 235 aaPredicted RBP13.82□□□□□ -0.2
SFSWAP-206ENST00000537582 RPS27P42677 84 aaKnown RBP13.82□□□□□ -0.2
SFSWAP-206ENST00000537582 MTNR1AP48039 350 aa13.82□□□□□ -0.2
SFSWAP-206ENST00000537582 HCCSP53701 268 aa13.82□□□□□ -0.2
SFSWAP-206ENST00000537582 CXCR4P61073 352 aa13.82□□□□□ -0.2
SFSWAP-206ENST00000537582 SLC35A2P78381 396 aa13.82□□□□□ -0.2
SFSWAP-206ENST00000537582 RBPJQ06330 500 aa13.82□□□□□ -0.2
SFSWAP-206ENST00000537582 PMPCAQ10713 525 aa13.82□□□□□ -0.2
SFSWAP-206ENST00000537582 THEM4Q5T1C6 240 aa13.82□□□□□ -0.2
SFSWAP-206ENST00000537582 FOXB2Q5VYV0 432 aa13.82□□□□□ -0.2
SFSWAP-206ENST00000537582 FAM214BQ7L5A3 538 aa13.82□□□□□ -0.2
SFSWAP-206ENST00000537582 ZNF540Q8NDQ6 660 aa13.82□□□□□ -0.2
SFSWAP-206ENST00000537582 RFKQ969G6 155 aa13.82□□□□□ -0.2
SFSWAP-206ENST00000537582 APH1AQ96BI3 265 aa13.82□□□□□ -0.2
SFSWAP-206ENST00000537582 RBP7Q96R05 134 aa13.82□□□□□ -0.2
SFSWAP-206ENST00000537582 TM9SF2Q99805 663 aa13.82□□□□□ -0.2
SFSWAP-206ENST00000537582 ULBP2Q9BZM5 246 aa13.82□□□□□ -0.2
SFSWAP-206ENST00000537582 SLCO5A1Q9H2Y9 848 aa13.82□□□□□ -0.2
SFSWAP-206ENST00000537582 WDR76Q9H967 626 aa13.82□□□□□ -0.2
SFSWAP-206ENST00000537582 FKBP14Q9NWM8 211 aa13.82□□□□□ -0.2
SFSWAP-206ENST00000537582 OSGIN2Q9Y236 505 aa13.82□□□□□ -0.2
SFSWAP-206ENST00000537582 RPL36Q9Y3U8 105 aaKnown RBP13.82□□□□□ -0.2
SFSWAP-206ENST00000537582 ZGRF1Q86YA3 2104 aa13.81□□□□□ -0.2
SFSWAP-206ENST00000537582 TRGV8A0A0C4DH27 118 aa13.81□□□□□ -0.2
SFSWAP-206ENST00000537582 A0A1W2PPL8 197 aa13.81□□□□□ -0.2
SFSWAP-206ENST00000537582 TFP02787 698 aa13.81□□□□□ -0.2
SFSWAP-206ENST00000537582 SMIM18P0DKX4 95 aa13.81□□□□□ -0.2
SFSWAP-206ENST00000537582 TMIGD3P0DMS9 266 aaPredicted RBP13.81□□□□□ -0.2
SFSWAP-206ENST00000537582 PER3P56645 1201 aa13.81□□□□□ -0.2
SFSWAP-206ENST00000537582 C9orf135Q5VTT2 229 aa13.81□□□□□ -0.2
SFSWAP-206ENST00000537582 BTLAQ7Z6A9 289 aa13.81□□□□□ -0.2
SFSWAP-206ENST00000537582 ZNF100Q8IYN0 542 aa13.81□□□□□ -0.2
SFSWAP-206ENST00000537582 RFLNBQ8N5W9 214 aa13.81□□□□□ -0.2
SFSWAP-206ENST00000537582 OR52I1Q8NGK6 324 aa13.81□□□□□ -0.2
SFSWAP-206ENST00000537582 RACGAP1Q9H0H5 632 aa13.81□□□□□ -0.2
SFSWAP-206ENST00000537582 DUSP21Q9H596 190 aa13.81□□□□□ -0.2
SFSWAP-206ENST00000537582 ADGRL4Q9HBW9 690 aa13.81□□□□□ -0.2
SFSWAP-206ENST00000537582 CRLF2Q9HC73 371 aa13.81□□□□□ -0.2
SFSWAP-206ENST00000537582 GP6Q9HCN6 339 aa13.81□□□□□ -0.2
SFSWAP-206ENST00000537582 MRPL22Q9NWU5 206 aaKnown RBP13.81□□□□□ -0.2
SFSWAP-206ENST00000537582 WARS2Q9UGM6 360 aaKnown RBP13.81□□□□□ -0.2
SFSWAP-206ENST00000537582 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.81□□□□□ -0.2
SFSWAP-206ENST00000537582 COL6A6A6NMZ7 2263 aa13.81□□□□□ -0.2
SFSWAP-206ENST00000537582 DOCK7Q96N67 2140 aa13.8□□□□□ -0.2
SFSWAP-206ENST00000537582 RP1L1Q8IWN7 2480 aaPredicted RBP13.8□□□□□ -0.2
SFSWAP-206ENST00000537582 SLC22A31A6NKX4 558 aa13.8□□□□□ -0.2
SFSWAP-206ENST00000537582 AHCYL1O43865 530 aa13.8□□□□□ -0.2
SFSWAP-206ENST00000537582 KHDRBS3O75525 346 aaKnown RBP13.8□□□□□ -0.2
SFSWAP-206ENST00000537582 TNFAIP8O95379 198 aa13.8□□□□□ -0.2
SFSWAP-206ENST00000537582 GAAP10253 952 aa13.8□□□□□ -0.2
SFSWAP-206ENST00000537582 EEF1B2P24534 225 aaKnown RBP13.8□□□□□ -0.2
SFSWAP-206ENST00000537582 CRABP1P29762 137 aa13.8□□□□□ -0.2
SFSWAP-206ENST00000537582 C21orf33P30042 268 aaPredicted RBP13.8□□□□□ -0.2
SFSWAP-206ENST00000537582 ROR2Q01974 943 aaKnown RBP13.8□□□□□ -0.2
SFSWAP-206ENST00000537582 ST3GAL4Q11206 333 aa13.8□□□□□ -0.2
SFSWAP-206ENST00000537582 SF3B4Q15427 424 aaKnown RBP eCLIP13.8□□□□□ -0.2
SFSWAP-206ENST00000537582 IGFBP7Q16270 282 aa13.8□□□□□ -0.2
SFSWAP-206ENST00000537582 KCTD21Q4G0X4 260 aa13.8□□□□□ -0.2
SFSWAP-206ENST00000537582 SLC35D3Q5M8T2 416 aa13.8□□□□□ -0.2
SFSWAP-206ENST00000537582 OR2A2Q6IF42 318 aa13.8□□□□□ -0.2
SFSWAP-206ENST00000537582 TFAP2EQ6VUC0 442 aa13.8□□□□□ -0.2
SFSWAP-206ENST00000537582 GPR137CQ8N3F9 429 aa13.8□□□□□ -0.2
SFSWAP-206ENST00000537582 TBX5Q99593 518 aa13.8□□□□□ -0.2
SFSWAP-206ENST00000537582 COPS4Q9BT78 406 aa13.8□□□□□ -0.2
SFSWAP-206ENST00000537582 RBM24Q9BX46 236 aaKnown RBP13.8□□□□□ -0.2
SFSWAP-206ENST00000537582 YIPF3Q9GZM5 350 aa13.8□□□□□ -0.2
SFSWAP-206ENST00000537582 GPR35Q9HC97 309 aa13.8□□□□□ -0.2
SFSWAP-206ENST00000537582 GLRX2Q9NS18 164 aa13.8□□□□□ -0.2
SFSWAP-206ENST00000537582 PARPBPQ9NWS1 579 aa13.8□□□□□ -0.2
SFSWAP-206ENST00000537582 SCN3BQ9NY72 215 aa13.8□□□□□ -0.2
SFSWAP-206ENST00000537582 EMC9Q9Y3B6 208 aa13.8□□□□□ -0.2
SFSWAP-206ENST00000537582 TPRKBQ9Y3C4 175 aa13.8□□□□□ -0.2
SFSWAP-206ENST00000537582 COMMD3-BMI1R4GMX3 469 aa13.8□□□□□ -0.2
SFSWAP-206ENST00000537582 KMT2BQ9UMN6 2715 aaPredicted RBP13.79□□□□□ -0.2
SFSWAP-206ENST00000537582 TRIM64A6NGJ6 449 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms