RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 CUTCQ9NTM9 273 aa12.94□□□□□ -0.34
USP44-203ENST00000537435 MMACHCQ9Y4U1 282 aa12.94□□□□□ -0.34
USP44-203ENST00000537435 TRAV36DV7A0A075B6V5 113 aa12.94□□□□□ -0.34
USP44-203ENST00000537435 GGT3PA6NGU5 568 aa12.94□□□□□ -0.34
USP44-203ENST00000537435 RAD1O60671 282 aa12.94□□□□□ -0.34
USP44-203ENST00000537435 DDAH2O95865 285 aa12.94□□□□□ -0.34
USP44-203ENST00000537435 FBXO45P0C2W1 286 aa12.94□□□□□ -0.34
USP44-203ENST00000537435 CXCL2P19875 107 aa12.94□□□□□ -0.34
USP44-203ENST00000537435 CCKBRP32239 447 aa12.94□□□□□ -0.34
USP44-203ENST00000537435 POU3F4P49335 361 aa12.94□□□□□ -0.34
USP44-203ENST00000537435 RAB14P61106 215 aa12.94□□□□□ -0.34
USP44-203ENST00000537435 YOD1Q5VVQ6 348 aaPredicted RBP12.94□□□□□ -0.34
USP44-203ENST00000537435 NKAIN2Q5VXU1 208 aa12.94□□□□□ -0.34
USP44-203ENST00000537435 OR5M10Q6IEU7 315 aa12.94□□□□□ -0.34
USP44-203ENST00000537435 CHRDL2Q6WN34 429 aa12.94□□□□□ -0.34
USP44-203ENST00000537435 DEFB119Q8N690 84 aa12.94□□□□□ -0.34
USP44-203ENST00000537435 NUDT9Q9BW91 350 aa12.94□□□□□ -0.34
USP44-203ENST00000537435 KCNK15Q9H427 330 aa12.94□□□□□ -0.34
USP44-203ENST00000537435 NARFLQ9H6Q4 476 aa12.94□□□□□ -0.34
USP44-203ENST00000537435 GTF2A1LQ9UNN4 478 aa12.94□□□□□ -0.34
USP44-203ENST00000537435 B9D1Q9UPM9 204 aa12.94□□□□□ -0.34
USP44-203ENST00000537435 SLC22A13Q9Y226 551 aa12.94□□□□□ -0.34
USP44-203ENST00000537435 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.93□□□□□ -0.34
USP44-203ENST00000537435 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.93□□□□□ -0.34
USP44-203ENST00000537435 PLSCR5A0PG75 271 aa12.93□□□□□ -0.34
USP44-203ENST00000537435 OR2M5A3KFT3 312 aa12.93□□□□□ -0.34
USP44-203ENST00000537435 SLC25A12O75746 678 aa12.93□□□□□ -0.34
USP44-203ENST00000537435 ITGA5P08648 1049 aa12.93□□□□□ -0.34
USP44-203ENST00000537435 VSIG10L2P0DP72 767 aa12.93□□□□□ -0.34
USP44-203ENST00000537435 LTBRP36941 435 aa12.93□□□□□ -0.34
USP44-203ENST00000537435 NR0B1P51843 470 aaKnown RBP12.93□□□□□ -0.34
USP44-203ENST00000537435 RAP2BP61225 183 aa12.93□□□□□ -0.34
USP44-203ENST00000537435 DHODHQ02127 395 aa12.93□□□□□ -0.34
USP44-203ENST00000537435 GUCA2AQ02747 115 aa12.93□□□□□ -0.34
USP44-203ENST00000537435 ZP2Q05996 745 aa12.93□□□□□ -0.34
USP44-203ENST00000537435 SLC17A1Q14916 467 aa12.93□□□□□ -0.34
USP44-203ENST00000537435 RBMS2Q15434 407 aaKnown RBP12.93□□□□□ -0.34
USP44-203ENST00000537435 CSRP2Q16527 193 aa12.93□□□□□ -0.34
USP44-203ENST00000537435 NHLRC1Q6VVB1 395 aa12.93□□□□□ -0.34
USP44-203ENST00000537435 GKN2Q86XP6 184 aa12.93□□□□□ -0.34
USP44-203ENST00000537435 OR4D10Q8NGI6 311 aa12.93□□□□□ -0.34
USP44-203ENST00000537435 GINS4Q9BRT9 223 aa12.93□□□□□ -0.34
USP44-203ENST00000537435 UCK1Q9HA47 277 aa12.93□□□□□ -0.34
USP44-203ENST00000537435 CDV3Q9UKY7 258 aaKnown RBP12.93□□□□□ -0.34
USP44-203ENST00000537435 IGKV3D-11A0A0A0MRZ8 115 aa12.93□□□□□ -0.34
USP44-203ENST00000537435 MEIS3P1A6NDR6 274 aa12.93□□□□□ -0.34
USP44-203ENST00000537435 L7N2F9 121 aa12.93□□□□□ -0.34
USP44-203ENST00000537435 KDM4BO94953 1096 aa12.93□□□□□ -0.34
USP44-203ENST00000537435 OR2A4O95047 310 aa12.93□□□□□ -0.34
USP44-203ENST00000537435 ZNF250P15622 560 aa12.93□□□□□ -0.34
USP44-203ENST00000537435 ACKR1Q16570 336 aa12.93□□□□□ -0.34
USP44-203ENST00000537435 PRAMEF17Q5VTA0 474 aa12.93□□□□□ -0.34
USP44-203ENST00000537435 MAMDC2Q7Z304 686 aaPredicted RBP12.93□□□□□ -0.34
USP44-203ENST00000537435 BIVMQ86UB2 503 aa12.93□□□□□ -0.34
USP44-203ENST00000537435 LRRC20Q8TCA0 184 aa12.93□□□□□ -0.34
USP44-203ENST00000537435 RELTQ969Z4 430 aa12.93□□□□□ -0.34
USP44-203ENST00000537435 PPP1R14AQ96A00 147 aa12.93□□□□□ -0.34
USP44-203ENST00000537435 OR2A7Q96R45 310 aa12.93□□□□□ -0.34
USP44-203ENST00000537435 NKX3-1Q99801 234 aaPredicted RBP12.93□□□□□ -0.34
USP44-203ENST00000537435 DHRS9Q9BPW9 319 aa12.93□□□□□ -0.34
USP44-203ENST00000537435 TPSD1Q9BZJ3 242 aa12.93□□□□□ -0.34
USP44-203ENST00000537435 GSX2Q9BZM3 304 aa12.93□□□□□ -0.34
USP44-203ENST00000537435 DHCR7Q9UBM7 475 aaKnown RBP12.93□□□□□ -0.34
USP44-203ENST00000537435 TRAV18A0A075B6X5 111 aa12.92□□□□□ -0.34
USP44-203ENST00000537435 PRSS37A4D1T9 235 aa12.92□□□□□ -0.34
USP44-203ENST00000537435 SLC16A7O60669 478 aa12.92□□□□□ -0.34
USP44-203ENST00000537435 OR6A2O95222 327 aa12.92□□□□□ -0.34
USP44-203ENST00000537435 PNPP00491 289 aa12.92□□□□□ -0.34
USP44-203ENST00000537435 FCER2P06734 321 aa12.92□□□□□ -0.34
USP44-203ENST00000537435 SPARCP09486 303 aa12.92□□□□□ -0.34
USP44-203ENST00000537435 CSF1P09603 554 aa12.92□□□□□ -0.34
USP44-203ENST00000537435 EFNA3P52797 238 aa12.92□□□□□ -0.34
USP44-203ENST00000537435 RPL27P61353 136 aaKnown RBP12.92□□□□□ -0.34
USP44-203ENST00000537435 EBPQ15125 230 aaKnown RBP12.92□□□□□ -0.34
USP44-203ENST00000537435 RAB30Q15771 203 aa12.92□□□□□ -0.34
USP44-203ENST00000537435 C2orf76Q3KRA6 126 aa12.92□□□□□ -0.34
USP44-203ENST00000537435 FDX2Q6P4F2 183 aa12.92□□□□□ -0.34
USP44-203ENST00000537435 SLC36A1Q7Z2H8 476 aa12.92□□□□□ -0.34
USP44-203ENST00000537435 C9orf40Q8IXQ3 194 aa12.92□□□□□ -0.34
USP44-203ENST00000537435 ZNF679Q8IYX0 411 aa12.92□□□□□ -0.34
USP44-203ENST00000537435 SFXN2Q96NB2 322 aa12.92□□□□□ -0.34
USP44-203ENST00000537435 OR1F2PQ96R84 312 aa12.92□□□□□ -0.34
USP44-203ENST00000537435 PTDSS2Q9BVG9 487 aa12.92□□□□□ -0.34
USP44-203ENST00000537435 TAS2R8Q9NYW2 309 aa12.92□□□□□ -0.34
USP44-203ENST00000537435 CACNA1CQ13936 2221 aa12.92□□□□□ -0.34
USP44-203ENST00000537435 A0A1W2PPL8 197 aa12.91□□□□□ -0.34
USP44-203ENST00000537435 C2CD4DB7Z1M9 353 aa12.91□□□□□ -0.34
USP44-203ENST00000537435 CDC40O60508 579 aaKnown RBP eCLIP12.91□□□□□ -0.34
USP44-203ENST00000537435 RLN1P04808 185 aa12.91□□□□□ -0.34
USP44-203ENST00000537435 NME1P15531 152 aaKnown RBP12.91□□□□□ -0.34
USP44-203ENST00000537435 C4BPBP20851 252 aa12.91□□□□□ -0.34
USP44-203ENST00000537435 INSM1Q01101 510 aaPredicted RBP12.91□□□□□ -0.34
USP44-203ENST00000537435 RAB11BQ15907 218 aa12.91□□□□□ -0.34
USP44-203ENST00000537435 ETFDHQ16134 617 aa12.91□□□□□ -0.34
USP44-203ENST00000537435 SGCBQ16585 318 aa12.91□□□□□ -0.34
USP44-203ENST00000537435 AANATQ16613 207 aa12.91□□□□□ -0.34
USP44-203ENST00000537435 HLA-DQA1Q5Y7H0 255 aa12.91□□□□□ -0.34
USP44-203ENST00000537435 BPHLQ86WA6 291 aaPredicted RBP12.91□□□□□ -0.34
USP44-203ENST00000537435 FAM3DQ96BQ1 224 aa12.91□□□□□ -0.34
USP44-203ENST00000537435 TBL1XR1Q9BZK7 514 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms