RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 A0A0G2JMZ2 1700 aa9.82□□□□□ -0.84
CLIP1-209ENST00000537178 LRRC37A2A6NM11 1700 aa9.82□□□□□ -0.84
CLIP1-209ENST00000537178 OR10K2Q6IF99 312 aa9.82□□□□□ -0.84
CLIP1-209ENST00000537178 FBXO46Q6PJ61 603 aaPredicted RBP9.82□□□□□ -0.84
CLIP1-209ENST00000537178 KDF1Q8NAX2 398 aaPredicted RBP9.82□□□□□ -0.84
CLIP1-209ENST00000537178 ARRDC2Q8TBH0 407 aa9.82□□□□□ -0.84
CLIP1-209ENST00000537178 NMNAT3Q96T66 252 aa9.82□□□□□ -0.84
CLIP1-209ENST00000537178 GMLQ99445 158 aa9.82□□□□□ -0.84
CLIP1-209ENST00000537178 PIGQQ9BRB3 760 aa9.82□□□□□ -0.84
CLIP1-209ENST00000537178 ULBP3Q9BZM4 244 aa9.82□□□□□ -0.84
CLIP1-209ENST00000537178 SPACA1Q9HBV2 294 aa9.82□□□□□ -0.84
CLIP1-209ENST00000537178 SLC22A11Q9NSA0 550 aa9.82□□□□□ -0.84
CLIP1-209ENST00000537178 TAS2R5Q9NYW4 299 aa9.82□□□□□ -0.84
CLIP1-209ENST00000537178 KPTNQ9Y664 436 aa9.82□□□□□ -0.84
CLIP1-209ENST00000537178 COL11A1P12107 1806 aaPredicted RBP9.81□□□□□ -0.84
CLIP1-209ENST00000537178 LOC100289279A0A1B0GTE1 492 aa9.81□□□□□ -0.84
CLIP1-209ENST00000537178 A0A1B0GWA3 101 aa9.81□□□□□ -0.84
CLIP1-209ENST00000537178 DVL1O14640 695 aa9.81□□□□□ -0.84
CLIP1-209ENST00000537178 LALBAP00709 142 aa9.81□□□□□ -0.84
CLIP1-209ENST00000537178 OR8U8P0C7N1 319 aa9.81□□□□□ -0.84
CLIP1-209ENST00000537178 RAB13P51153 203 aa9.81□□□□□ -0.84
CLIP1-209ENST00000537178 DVL1P1P54792 670 aaPredicted RBP9.81□□□□□ -0.84
CLIP1-209ENST00000537178 TAZQ16635 292 aa9.81□□□□□ -0.84
CLIP1-209ENST00000537178 ADPRMQ3LIE5 342 aa9.81□□□□□ -0.84
CLIP1-209ENST00000537178 GLYR1Q49A26 553 aaPredicted RBP9.81□□□□□ -0.84
CLIP1-209ENST00000537178 Q6ZPB1 254 aaPredicted RBP9.81□□□□□ -0.84
CLIP1-209ENST00000537178 SPRED1Q7Z699 444 aa9.81□□□□□ -0.84
CLIP1-209ENST00000537178 SIAH3Q8IW03 269 aa9.81□□□□□ -0.84
CLIP1-209ENST00000537178 TMEM178AQ8NBL3 297 aa9.81□□□□□ -0.84
CLIP1-209ENST00000537178 OR52N1Q8NH53 320 aa9.81□□□□□ -0.84
CLIP1-209ENST00000537178 FGF13Q92913 245 aa9.81□□□□□ -0.84
CLIP1-209ENST00000537178 FAM122AQ96E09 287 aa9.81□□□□□ -0.84
CLIP1-209ENST00000537178 REEP6Q96HR9 211 aa9.81□□□□□ -0.84
CLIP1-209ENST00000537178 FER1L6-AS2Q96M78 137 aa9.81□□□□□ -0.84
CLIP1-209ENST00000537178 PLK3Q9H4B4 646 aa9.81□□□□□ -0.84
CLIP1-209ENST00000537178 TM7SF3Q9NS93 570 aa9.81□□□□□ -0.84
CLIP1-209ENST00000537178 DNMT3BQ9UBC3 853 aaKnown RBP9.81□□□□□ -0.84
CLIP1-209ENST00000537178 PIGLQ9Y2B2 252 aa9.81□□□□□ -0.84
CLIP1-209ENST00000537178 PPP5D1E7EU14 171 aa9.81□□□□□ -0.84
CLIP1-209ENST00000537178 H3BQ06 376 aaPredicted RBP9.81□□□□□ -0.84
CLIP1-209ENST00000537178 P2RY10O00398 339 aa9.81□□□□□ -0.84
CLIP1-209ENST00000537178 RFX2P48378 723 aa9.81□□□□□ -0.84
CLIP1-209ENST00000537178 CARD18P57730 90 aa9.81□□□□□ -0.84
CLIP1-209ENST00000537178 DCDP81605 110 aaKnown RBP9.81□□□□□ -0.84
CLIP1-209ENST00000537178 FOXK2Q01167 660 aa9.81□□□□□ -0.84
CLIP1-209ENST00000537178 MEP1BQ16820 701 aa9.81□□□□□ -0.84
CLIP1-209ENST00000537178 PRAMEF20Q5VT98 475 aa9.81□□□□□ -0.84
CLIP1-209ENST00000537178 KANSL1Q7Z3B3 1105 aa9.81□□□□□ -0.84
CLIP1-209ENST00000537178 DPPA2Q7Z7J5 298 aa9.81□□□□□ -0.84
CLIP1-209ENST00000537178 OR52H1Q8NGJ2 320 aa9.81□□□□□ -0.84
CLIP1-209ENST00000537178 H1FXQ92522 213 aaKnown RBP9.81□□□□□ -0.84
CLIP1-209ENST00000537178 APH1AQ96BI3 265 aa9.81□□□□□ -0.84
CLIP1-209ENST00000537178 DECR2Q9NUI1 292 aa9.81□□□□□ -0.84
CLIP1-209ENST00000537178 MMACHCQ9Y4U1 282 aa9.81□□□□□ -0.84
CLIP1-209ENST00000537178 TRDV1A0A1B0GX56 115 aa9.81□□□□□ -0.84
CLIP1-209ENST00000537178 PDGFAP04085 211 aa9.81□□□□□ -0.84
CLIP1-209ENST00000537178 SLC10A3P09131 477 aa9.81□□□□□ -0.84
CLIP1-209ENST00000537178 ALDOCP09972 364 aaKnown RBP9.81□□□□□ -0.84
CLIP1-209ENST00000537178 CSN1S1P47710 185 aa9.81□□□□□ -0.84
CLIP1-209ENST00000537178 UBE2G1P62253 170 aa9.81□□□□□ -0.84
CLIP1-209ENST00000537178 HES1Q14469 280 aa9.81□□□□□ -0.84
CLIP1-209ENST00000537178 OR8B8Q15620 311 aa9.81□□□□□ -0.84
CLIP1-209ENST00000537178 C4orf17Q53FE4 359 aa9.81□□□□□ -0.84
CLIP1-209ENST00000537178 NAXDQ8IW45 347 aa9.81□□□□□ -0.84
CLIP1-209ENST00000537178 C1orf87Q8N0U7 546 aa9.81□□□□□ -0.84
CLIP1-209ENST00000537178 GJC3Q8NFK1 279 aa9.81□□□□□ -0.84
CLIP1-209ENST00000537178 SLC46A2Q9BY10 475 aa9.81□□□□□ -0.84
CLIP1-209ENST00000537178 AMBRA1Q9C0C7 1298 aa9.81□□□□□ -0.84
CLIP1-209ENST00000537178 HCFC1R1Q9NWW0 138 aa9.81□□□□□ -0.84
CLIP1-209ENST00000537178 H0Y8G0 127 aa9.81□□□□□ -0.84
CLIP1-209ENST00000537178 BCAT2O15382 392 aaPredicted RBP9.81□□□□□ -0.84
CLIP1-209ENST00000537178 ST8SIA3O43173 380 aa9.81□□□□□ -0.84
CLIP1-209ENST00000537178 AQP9O43315 295 aa9.81□□□□□ -0.84
CLIP1-209ENST00000537178 WNT11O96014 354 aa9.81□□□□□ -0.84
CLIP1-209ENST00000537178 TFAP2AP05549 437 aa9.81□□□□□ -0.84
CLIP1-209ENST00000537178 THBS1P07996 1170 aa9.81□□□□□ -0.84
CLIP1-209ENST00000537178 FPR3P25089 353 aa9.81□□□□□ -0.84
CLIP1-209ENST00000537178 ITGB8P26012 769 aa9.81□□□□□ -0.84
CLIP1-209ENST00000537178 DAPP51397 102 aa9.81□□□□□ -0.84
CLIP1-209ENST00000537178 MAP2K6P52564 334 aa9.81□□□□□ -0.84
CLIP1-209ENST00000537178 KIAA0141Q14154 515 aaPredicted RBP9.81□□□□□ -0.84
CLIP1-209ENST00000537178 SLC35D3Q5M8T2 416 aa9.81□□□□□ -0.84
CLIP1-209ENST00000537178 GLYATL3Q5SZD4 288 aa9.81□□□□□ -0.84
CLIP1-209ENST00000537178 FAM111BQ6SJ93 734 aa9.81□□□□□ -0.84
CLIP1-209ENST00000537178 WWTR1Q9GZV5 400 aa9.81□□□□□ -0.84
CLIP1-209ENST00000537178 PIGMQ9H3S5 423 aa9.81□□□□□ -0.84
CLIP1-209ENST00000537178 A3GALT2U3KPV4 340 aa9.81□□□□□ -0.84
CLIP1-209ENST00000537178 TRABD2BA6NFA1 517 aa9.8□□□□□ -0.84
CLIP1-209ENST00000537178 H7BYZ3 331 aa9.8□□□□□ -0.84
CLIP1-209ENST00000537178 GRB2P62993 217 aaKnown RBP9.8□□□□□ -0.84
CLIP1-209ENST00000537178 ARHGAP11BQ3KRB8 267 aa9.8□□□□□ -0.84
CLIP1-209ENST00000537178 WDR88Q6ZMY6 472 aa9.8□□□□□ -0.84
CLIP1-209ENST00000537178 DBX2Q6ZNG2 339 aa9.8□□□□□ -0.84
CLIP1-209ENST00000537178 HIST2H3AQ71DI3 136 aa9.8□□□□□ -0.84
CLIP1-209ENST00000537178 GDPD3Q7L5L3 318 aa9.8□□□□□ -0.84
CLIP1-209ENST00000537178 SFT2D1Q8WV19 159 aa9.8□□□□□ -0.84
CLIP1-209ENST00000537178 RBPMSQ93062 196 aaKnown RBP9.8□□□□□ -0.84
CLIP1-209ENST00000537178 ZNF583Q96ND8 569 aa9.8□□□□□ -0.84
CLIP1-209ENST00000537178 DCLRE1CQ96SD1 692 aaKnown RBP9.8□□□□□ -0.84
CLIP1-209ENST00000537178 NAA50Q9GZZ1 169 aaKnown RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms