RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 GDF2Q9UK05 429 aaPredicted RBP15.55■□□□□ 0.08
TNFRSF1A-209ENST00000536717 MOKQ9UQ07 419 aa15.55■□□□□ 0.08
TNFRSF1A-209ENST00000536717 SEC14L2O76054 403 aa15.54■□□□□ 0.08
TNFRSF1A-209ENST00000536717 IGKV3-15P01624 115 aa15.54■□□□□ 0.08
TNFRSF1A-209ENST00000536717 IGLV1-44P01699 117 aa15.54■□□□□ 0.08
TNFRSF1A-209ENST00000536717 IFNGR1P15260 489 aa15.54■□□□□ 0.08
TNFRSF1A-209ENST00000536717 PAX7P23759 505 aa15.54■□□□□ 0.08
TNFRSF1A-209ENST00000536717 FABP6P51161 128 aa15.54■□□□□ 0.08
TNFRSF1A-209ENST00000536717 LAPTM4AQ15012 233 aa15.54■□□□□ 0.08
TNFRSF1A-209ENST00000536717 ZNF544Q6NX49 715 aa15.54■□□□□ 0.08
TNFRSF1A-209ENST00000536717 C1orf94Q6P1W5 598 aa15.54■□□□□ 0.08
TNFRSF1A-209ENST00000536717 ZER1Q7Z7L7 766 aa15.54■□□□□ 0.08
TNFRSF1A-209ENST00000536717 AMIGO2Q86SJ2 522 aa15.54■□□□□ 0.08
TNFRSF1A-209ENST00000536717 OAFQ86UD1 273 aa15.54■□□□□ 0.08
TNFRSF1A-209ENST00000536717 MEX3DQ86XN8 651 aaKnown RBP15.54■□□□□ 0.08
TNFRSF1A-209ENST00000536717 FBXL14Q8N1E6 418 aa15.54■□□□□ 0.08
TNFRSF1A-209ENST00000536717 OR10G2Q8NGC3 310 aa15.54■□□□□ 0.08
TNFRSF1A-209ENST00000536717 OR9Q2Q8NGE9 314 aa15.54■□□□□ 0.08
TNFRSF1A-209ENST00000536717 GIPC3Q8TF64 312 aa15.54■□□□□ 0.08
TNFRSF1A-209ENST00000536717 NRBF2Q96F24 287 aa15.54■□□□□ 0.08
TNFRSF1A-209ENST00000536717 CENPNQ96H22 339 aaPredicted RBP15.54■□□□□ 0.08
TNFRSF1A-209ENST00000536717 SEC61A2Q9H9S3 476 aa15.54■□□□□ 0.08
TNFRSF1A-209ENST00000536717 NTN4Q9HB63 628 aa15.54■□□□□ 0.08
TNFRSF1A-209ENST00000536717 ATP23Q9Y6H3 246 aa15.54■□□□□ 0.08
TNFRSF1A-209ENST00000536717 ARRDC5A6NEK1 342 aa15.53■□□□□ 0.08
TNFRSF1A-209ENST00000536717 ZNF726A6NNF4 738 aa15.53■□□□□ 0.08
TNFRSF1A-209ENST00000536717 H0YHG0 523 aa15.53■□□□□ 0.08
TNFRSF1A-209ENST00000536717 BLOC1S5-TXNDC5H3BN57 136 aa15.53■□□□□ 0.08
TNFRSF1A-209ENST00000536717 SMAD7O15105 426 aaKnown RBP15.53■□□□□ 0.08
TNFRSF1A-209ENST00000536717 CECR9P0C854 216 aa15.53■□□□□ 0.08
TNFRSF1A-209ENST00000536717 BIDP55957 195 aa15.53■□□□□ 0.08
TNFRSF1A-209ENST00000536717 TAF11Q15544 211 aa15.53■□□□□ 0.08
TNFRSF1A-209ENST00000536717 ETFDHQ16134 617 aa15.53■□□□□ 0.08
TNFRSF1A-209ENST00000536717 CLEC12BQ2HXU8 276 aa15.53■□□□□ 0.08
TNFRSF1A-209ENST00000536717 C3orf36Q3SXR2 165 aa15.53■□□□□ 0.08
TNFRSF1A-209ENST00000536717 ANKDD1AQ495B1 522 aa15.53■□□□□ 0.08
TNFRSF1A-209ENST00000536717 PGBD2Q6P3X8 592 aa15.53■□□□□ 0.08
TNFRSF1A-209ENST00000536717 SHQ1Q6PI26 577 aaKnown RBP15.53■□□□□ 0.08
TNFRSF1A-209ENST00000536717 Q71RC1 249 aaPredicted RBP15.53■□□□□ 0.08
TNFRSF1A-209ENST00000536717 MYPOPQ86VE0 399 aaPredicted RBP15.53■□□□□ 0.08
TNFRSF1A-209ENST00000536717 FAM169BQ8N8A8 192 aa15.53■□□□□ 0.08
TNFRSF1A-209ENST00000536717 AQP11Q8NBQ7 271 aa15.53■□□□□ 0.08
TNFRSF1A-209ENST00000536717 GNPDA2Q8TDQ7 276 aa15.53■□□□□ 0.08
TNFRSF1A-209ENST00000536717 CACNG6Q9BXT2 260 aa15.53■□□□□ 0.08
TNFRSF1A-209ENST00000536717 PDP1Q9P0J1 537 aaPredicted RBP15.53■□□□□ 0.08
TNFRSF1A-209ENST00000536717 ANK3Q12955 4377 aaKnown RBP15.53■□□□□ 0.08
TNFRSF1A-209ENST00000536717 HIVEP2P31629 2446 aa15.53■□□□□ 0.08
TNFRSF1A-209ENST00000536717 CDC42EP2O14613 210 aa15.53■□□□□ 0.08
TNFRSF1A-209ENST00000536717 CELA3BP08861 270 aa15.53■□□□□ 0.08
TNFRSF1A-209ENST00000536717 ZNF23P17027 643 aa15.53■□□□□ 0.08
TNFRSF1A-209ENST00000536717 FPR3P25089 353 aa15.53■□□□□ 0.08
TNFRSF1A-209ENST00000536717 ACVR1BP36896 505 aa15.53■□□□□ 0.08
TNFRSF1A-209ENST00000536717 ELF3P78545 371 aaPredicted RBP15.53■□□□□ 0.08
TNFRSF1A-209ENST00000536717 NAAAQ02083 359 aa15.53■□□□□ 0.08
TNFRSF1A-209ENST00000536717 TNK1Q13470 666 aa15.53■□□□□ 0.08
TNFRSF1A-209ENST00000536717 ZNF770Q6IQ21 691 aaPredicted RBP15.53■□□□□ 0.08
TNFRSF1A-209ENST00000536717 CLEC9AQ6UXN8 241 aa15.53■□□□□ 0.08
TNFRSF1A-209ENST00000536717 DNM1P46Q6ZS02 220 aa15.53■□□□□ 0.08
TNFRSF1A-209ENST00000536717 SLC35D2Q76EJ3 337 aa15.53■□□□□ 0.08
TNFRSF1A-209ENST00000536717 ZNF627Q7L945 461 aa15.53■□□□□ 0.08
TNFRSF1A-209ENST00000536717 TMEM179BQ7Z7N9 219 aa15.53■□□□□ 0.08
TNFRSF1A-209ENST00000536717 HIPK1Q86Z02 1210 aa15.53■□□□□ 0.08
TNFRSF1A-209ENST00000536717 OR13C2Q8NGS9 318 aa15.53■□□□□ 0.08
TNFRSF1A-209ENST00000536717 OR5K1Q8NHB7 308 aa15.53■□□□□ 0.08
TNFRSF1A-209ENST00000536717 PKP2Q99959 881 aa15.53■□□□□ 0.08
TNFRSF1A-209ENST00000536717 KATNB1Q9BVA0 655 aa15.53■□□□□ 0.08
TNFRSF1A-209ENST00000536717 SEMA6AQ9H2E6 1030 aa15.53■□□□□ 0.08
TNFRSF1A-209ENST00000536717 HIF3AQ9Y2N7 669 aa15.53■□□□□ 0.08
TNFRSF1A-209ENST00000536717 G3V2T6 193 aa15.52■□□□□ 0.07
TNFRSF1A-209ENST00000536717 RNF13O43567 381 aa15.52■□□□□ 0.07
TNFRSF1A-209ENST00000536717 BAG2O95816 211 aa15.52■□□□□ 0.07
TNFRSF1A-209ENST00000536717 LY6G6DO95868 133 aa15.52■□□□□ 0.07
TNFRSF1A-209ENST00000536717 CBR1P16152 277 aa15.52■□□□□ 0.07
TNFRSF1A-209ENST00000536717 CALCRP30988 508 aa15.52■□□□□ 0.07
TNFRSF1A-209ENST00000536717 APOBEC3AP31941 199 aaPredicted RBP15.52■□□□□ 0.07
TNFRSF1A-209ENST00000536717 MELKQ14680 651 aa15.52■□□□□ 0.07
TNFRSF1A-209ENST00000536717 ZDHHC13Q8IUH4 622 aa15.52■□□□□ 0.07
TNFRSF1A-209ENST00000536717 OR6N1Q8NGY5 312 aa15.52■□□□□ 0.07
TNFRSF1A-209ENST00000536717 OR51A7Q8NH64 312 aa15.52■□□□□ 0.07
TNFRSF1A-209ENST00000536717 OR6X1Q8NH79 312 aa15.52■□□□□ 0.07
TNFRSF1A-209ENST00000536717 ADAD1Q96M93 576 aaKnown RBP15.52■□□□□ 0.07
TNFRSF1A-209ENST00000536717 ULBP2Q9BZM5 246 aa15.52■□□□□ 0.07
TNFRSF1A-209ENST00000536717 NDEL1Q9GZM8 345 aa15.52■□□□□ 0.07
TNFRSF1A-209ENST00000536717 B3GAT2Q9NPZ5 323 aa15.52■□□□□ 0.07
TNFRSF1A-209ENST00000536717 SONP18583 2426 aaKnown RBP15.51■□□□□ 0.07
TNFRSF1A-209ENST00000536717 TRAV27A0A087WT01 109 aa15.51■□□□□ 0.07
TNFRSF1A-209ENST00000536717 UNC119BA6NIH7 251 aa15.51■□□□□ 0.07
TNFRSF1A-209ENST00000536717 GASTP01350 101 aa15.51■□□□□ 0.07
TNFRSF1A-209ENST00000536717 CRYAAP02489 173 aa15.51■□□□□ 0.07
TNFRSF1A-209ENST00000536717 HEXAP06865 529 aa15.51■□□□□ 0.07
TNFRSF1A-209ENST00000536717 GSSP48637 474 aa15.51■□□□□ 0.07
TNFRSF1A-209ENST00000536717 CSNK1A1P48729 337 aa15.51■□□□□ 0.07
TNFRSF1A-209ENST00000536717 IDH3GP51553 393 aaPredicted RBP15.51■□□□□ 0.07
TNFRSF1A-209ENST00000536717 RPL18Q07020 188 aaKnown RBP15.51■□□□□ 0.07
TNFRSF1A-209ENST00000536717 TSPAN31Q12999 210 aa15.51■□□□□ 0.07
TNFRSF1A-209ENST00000536717 ZBED5Q49AG3 693 aa15.51■□□□□ 0.07
TNFRSF1A-209ENST00000536717 MDP1Q86V88 176 aa15.51■□□□□ 0.07
TNFRSF1A-209ENST00000536717 HS3ST5Q8IZT8 346 aa15.51■□□□□ 0.07
TNFRSF1A-209ENST00000536717 PQLC1Q8N2U9 271 aa15.51■□□□□ 0.07
TNFRSF1A-209ENST00000536717 SVOPLQ8N434 492 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms