RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 ZNF81P51508 661 aa11.06□□□□□ -0.64
TNFRSF1A-207ENST00000535958 UCP2P55851 309 aa11.06□□□□□ -0.64
TNFRSF1A-207ENST00000535958 ERVS71-1P61550 626 aa11.06□□□□□ -0.64
TNFRSF1A-207ENST00000535958 FOXL1Q12952 345 aa11.06□□□□□ -0.64
TNFRSF1A-207ENST00000535958 FAM209AQ5JX71 171 aa11.06□□□□□ -0.64
TNFRSF1A-207ENST00000535958 ZNF771Q7L3S4 317 aaPredicted RBP11.06□□□□□ -0.64
TNFRSF1A-207ENST00000535958 COMTD1Q86VU5 262 aa11.06□□□□□ -0.64
TNFRSF1A-207ENST00000535958 OR1J1Q8NGS3 322 aa11.06□□□□□ -0.64
TNFRSF1A-207ENST00000535958 CCL17Q92583 94 aa11.06□□□□□ -0.64
TNFRSF1A-207ENST00000535958 TSPAN32Q96QS1 320 aa11.06□□□□□ -0.64
TNFRSF1A-207ENST00000535958 EGLN1Q9GZT9 426 aa11.06□□□□□ -0.64
TNFRSF1A-207ENST00000535958 TMEM38AQ9H6F2 299 aa11.06□□□□□ -0.64
TNFRSF1A-207ENST00000535958 CCNB1IP1Q9NPC3 277 aa11.06□□□□□ -0.64
TNFRSF1A-207ENST00000535958 UBAP1Q9NZ09 502 aa11.06□□□□□ -0.64
TNFRSF1A-207ENST00000535958 EIF3KQ9UBQ5 218 aaKnown RBP11.06□□□□□ -0.64
TNFRSF1A-207ENST00000535958 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.06□□□□□ -0.64
TNFRSF1A-207ENST00000535958 PPIAL4AQ9Y536 164 aa11.06□□□□□ -0.64
TNFRSF1A-207ENST00000535958 V9GYY5 206 aaPredicted RBP11.06□□□□□ -0.64
TNFRSF1A-207ENST00000535958 A0A1W2PRG6 482 aa11.05□□□□□ -0.64
TNFRSF1A-207ENST00000535958 CPSF4LA6NMK7 179 aaKnown RBP11.05□□□□□ -0.64
TNFRSF1A-207ENST00000535958 M0R3H8 397 aa11.05□□□□□ -0.64
TNFRSF1A-207ENST00000535958 FMO6PO60774 539 aa11.05□□□□□ -0.64
TNFRSF1A-207ENST00000535958 AVPP01185 164 aa11.05□□□□□ -0.64
TNFRSF1A-207ENST00000535958 QDPRP09417 244 aa11.05□□□□□ -0.64
TNFRSF1A-207ENST00000535958 UBA52P62987 128 aaKnown RBP11.05□□□□□ -0.64
TNFRSF1A-207ENST00000535958 CYP51A1Q16850 503 aa11.05□□□□□ -0.64
TNFRSF1A-207ENST00000535958 ARMCX4Q5H9R4 360 aa11.05□□□□□ -0.64
TNFRSF1A-207ENST00000535958 LRIF1Q5T3J3 769 aa11.05□□□□□ -0.64
TNFRSF1A-207ENST00000535958 SHISA2Q6UWI4 295 aa11.05□□□□□ -0.64
TNFRSF1A-207ENST00000535958 C1orf229Q6ZS94 237 aaPredicted RBP11.05□□□□□ -0.64
TNFRSF1A-207ENST00000535958 LRRC18Q8N456 261 aa11.05□□□□□ -0.64
TNFRSF1A-207ENST00000535958 PAQR4Q8N4S7 273 aaPredicted RBP11.05□□□□□ -0.64
TNFRSF1A-207ENST00000535958 SMYD1Q8NB12 490 aa11.05□□□□□ -0.64
TNFRSF1A-207ENST00000535958 FGFBP3Q8TAT2 258 aa11.05□□□□□ -0.64
TNFRSF1A-207ENST00000535958 C22orf15Q8WYQ4 148 aa11.05□□□□□ -0.64
TNFRSF1A-207ENST00000535958 SPDL1Q96EA4 605 aa11.05□□□□□ -0.64
TNFRSF1A-207ENST00000535958 SLCO1B3Q9NPD5 702 aa11.05□□□□□ -0.64
TNFRSF1A-207ENST00000535958 TCF7L2Q9NQB0 619 aa11.05□□□□□ -0.64
TNFRSF1A-207ENST00000535958 SLC25A37Q9NYZ2 338 aa11.05□□□□□ -0.64
TNFRSF1A-207ENST00000535958 CCDC167Q9P0B6 97 aa11.05□□□□□ -0.64
TNFRSF1A-207ENST00000535958 ZNF229Q9UJW7 825 aa11.05□□□□□ -0.64
TNFRSF1A-207ENST00000535958 PCDHGB1Q9Y5G3 927 aa11.05□□□□□ -0.64
TNFRSF1A-207ENST00000535958 WNK2Q9Y3S1 2297 aa11.04□□□□□ -0.64
TNFRSF1A-207ENST00000535958 SPRY3O43610 288 aa11.04□□□□□ -0.64
TNFRSF1A-207ENST00000535958 DEAF1O75398 565 aaPredicted RBP11.04□□□□□ -0.64
TNFRSF1A-207ENST00000535958 PGA4P0DJD7 388 aa11.04□□□□□ -0.64
TNFRSF1A-207ENST00000535958 PGA3P0DJD8 388 aa11.04□□□□□ -0.64
TNFRSF1A-207ENST00000535958 NR2C1P13056 603 aa11.04□□□□□ -0.64
TNFRSF1A-207ENST00000535958 WDR4P57081 412 aaKnown RBP11.04□□□□□ -0.64
TNFRSF1A-207ENST00000535958 LCN2P80188 198 aa11.04□□□□□ -0.64
TNFRSF1A-207ENST00000535958 ZNF74Q16587 644 aa11.04□□□□□ -0.64
TNFRSF1A-207ENST00000535958 ZNF718Q3SXZ3 478 aa11.04□□□□□ -0.64
TNFRSF1A-207ENST00000535958 NRN1LQ496H8 165 aa11.04□□□□□ -0.64
TNFRSF1A-207ENST00000535958 ZMAT1Q5H9K5 638 aa11.04□□□□□ -0.64
TNFRSF1A-207ENST00000535958 WDR88Q6ZMY6 472 aa11.04□□□□□ -0.64
TNFRSF1A-207ENST00000535958 MAVSQ7Z434 540 aa11.04□□□□□ -0.64
TNFRSF1A-207ENST00000535958 WDFY1Q8IWB7 410 aa11.04□□□□□ -0.64
TNFRSF1A-207ENST00000535958 C11orf65Q8NCR3 313 aa11.04□□□□□ -0.64
TNFRSF1A-207ENST00000535958 NOXO1Q8NFA2 376 aa11.04□□□□□ -0.64
TNFRSF1A-207ENST00000535958 VANGL1Q8TAA9 524 aaPredicted RBP11.04□□□□□ -0.64
TNFRSF1A-207ENST00000535958 SLC26A7Q8TE54 656 aa11.04□□□□□ -0.64
TNFRSF1A-207ENST00000535958 ZMAT3Q9HA38 289 aaKnown RBP11.04□□□□□ -0.64
TNFRSF1A-207ENST00000535958 CYSLTR2Q9NS75 346 aa11.04□□□□□ -0.64
TNFRSF1A-207ENST00000535958 STX18Q9P2W9 335 aaKnown RBP11.04□□□□□ -0.64
TNFRSF1A-207ENST00000535958 USH1CQ9Y6N9 552 aa11.04□□□□□ -0.64
TNFRSF1A-207ENST00000535958 MGAM2Q2M2H8 2515 aa11.03□□□□□ -0.64
TNFRSF1A-207ENST00000535958 BLOC1S5-TXNDC5H3BN57 136 aa11.03□□□□□ -0.64
TNFRSF1A-207ENST00000535958 MGRN1O60291 552 aa11.03□□□□□ -0.64
TNFRSF1A-207ENST00000535958 FOXH1O75593 365 aa11.03□□□□□ -0.64
TNFRSF1A-207ENST00000535958 IGHV3-13P01766 116 aa11.03□□□□□ -0.64
TNFRSF1A-207ENST00000535958 OPN1SWP03999 348 aa11.03□□□□□ -0.64
TNFRSF1A-207ENST00000535958 HOXB9P17482 250 aaPredicted RBP11.03□□□□□ -0.64
TNFRSF1A-207ENST00000535958 GDI2P50395 445 aaKnown RBP11.03□□□□□ -0.64
TNFRSF1A-207ENST00000535958 ATP4BP51164 291 aa11.03□□□□□ -0.64
TNFRSF1A-207ENST00000535958 DAP3P51398 398 aaKnown RBP11.03□□□□□ -0.64
TNFRSF1A-207ENST00000535958 TNFAIP8L3Q5GJ75 292 aa11.03□□□□□ -0.64
TNFRSF1A-207ENST00000535958 ENTPD8Q5MY95 495 aa11.03□□□□□ -0.64
TNFRSF1A-207ENST00000535958 SPATA46Q5T0L3 261 aa11.03□□□□□ -0.64
TNFRSF1A-207ENST00000535958 LRFN4Q6PJG9 635 aa11.03□□□□□ -0.64
TNFRSF1A-207ENST00000535958 BLOC1S3Q6QNY0 202 aa11.03□□□□□ -0.64
TNFRSF1A-207ENST00000535958 MSRB3Q8IXL7 192 aa11.03□□□□□ -0.64
TNFRSF1A-207ENST00000535958 MCHR2Q969V1 340 aa11.03□□□□□ -0.64
TNFRSF1A-207ENST00000535958 ZNF347Q96SE7 839 aa11.03□□□□□ -0.64
TNFRSF1A-207ENST00000535958 GPA33Q99795 319 aa11.03□□□□□ -0.64
TNFRSF1A-207ENST00000535958 ZNF747Q9BV97 191 aa11.03□□□□□ -0.64
TNFRSF1A-207ENST00000535958 SLC19A3Q9BZV2 496 aa11.03□□□□□ -0.64
TNFRSF1A-207ENST00000535958 TAS2R5Q9NYW4 299 aa11.03□□□□□ -0.64
TNFRSF1A-207ENST00000535958 VAPAQ9P0L0 249 aa11.03□□□□□ -0.64
TNFRSF1A-207ENST00000535958 SLAMF8Q9P0V8 285 aa11.03□□□□□ -0.64
TNFRSF1A-207ENST00000535958 CGGBP1Q9UFW8 167 aaPredicted RBP11.03□□□□□ -0.64
TNFRSF1A-207ENST00000535958 SLC7A7Q9UM01 511 aa11.03□□□□□ -0.64
TNFRSF1A-207ENST00000535958 TRIM33Q9UPN9 1127 aa11.03□□□□□ -0.64
TNFRSF1A-207ENST00000535958 CACNG2Q9Y698 323 aa11.03□□□□□ -0.64
TNFRSF1A-207ENST00000535958 C5orf49A4QMS7 147 aa11.02□□□□□ -0.65
TNFRSF1A-207ENST00000535958 TRAPPC13A5PLN9 417 aa11.02□□□□□ -0.65
TNFRSF1A-207ENST00000535958 GMNCA6NCL1 334 aa11.02□□□□□ -0.65
TNFRSF1A-207ENST00000535958 KCNAB3O43448 404 aa11.02□□□□□ -0.65
TNFRSF1A-207ENST00000535958 TPST2O60704 377 aa11.02□□□□□ -0.65
TNFRSF1A-207ENST00000535958 MFN2O95140 757 aa11.02□□□□□ -0.65
TNFRSF1A-207ENST00000535958 MAKP20794 623 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms