RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 SYNPRQ8TBG9 265 aa9.55□□□□□ -0.88
CLSTN3-206ENST00000535668 C11orf40Q8WZ69 217 aa9.55□□□□□ -0.88
CLSTN3-206ENST00000535668 DVL3Q92997 716 aaPredicted RBP9.55□□□□□ -0.88
CLSTN3-206ENST00000535668 SYT3Q9BQG1 590 aa9.55□□□□□ -0.88
CLSTN3-206ENST00000535668 CPPED1Q9BRF8 314 aaPredicted RBP9.55□□□□□ -0.88
CLSTN3-206ENST00000535668 WACQ9BTA9 647 aa9.55□□□□□ -0.88
CLSTN3-206ENST00000535668 ZNF665Q9H7R5 613 aa9.55□□□□□ -0.88
CLSTN3-206ENST00000535668 SIAEQ9HAT2 523 aa9.55□□□□□ -0.88
CLSTN3-206ENST00000535668 NANSQ9NR45 359 aa9.55□□□□□ -0.88
CLSTN3-206ENST00000535668 TUBG2Q9NRH3 451 aa9.55□□□□□ -0.88
CLSTN3-206ENST00000535668 TREM2Q9NZC2 230 aa9.55□□□□□ -0.88
CLSTN3-206ENST00000535668 STX18Q9P2W9 335 aaKnown RBP9.55□□□□□ -0.88
CLSTN3-206ENST00000535668 TRAPPC13A5PLN9 417 aa9.54□□□□□ -0.88
CLSTN3-206ENST00000535668 LRRN3E7EW58 273 aa9.54□□□□□ -0.88
CLSTN3-206ENST00000535668 PLPP2O43688 288 aa9.54□□□□□ -0.88
CLSTN3-206ENST00000535668 FSTL3O95633 263 aa9.54□□□□□ -0.88
CLSTN3-206ENST00000535668 IGHG1P01857 330 aa9.54□□□□□ -0.88
CLSTN3-206ENST00000535668 KITP10721 976 aa9.54□□□□□ -0.88
CLSTN3-206ENST00000535668 NAT2P11245 290 aa9.54□□□□□ -0.88
CLSTN3-206ENST00000535668 EPHA1P21709 976 aa9.54□□□□□ -0.88
CLSTN3-206ENST00000535668 RBM34P42696 430 aaKnown RBP9.54□□□□□ -0.88
CLSTN3-206ENST00000535668 STX1BP61266 288 aa9.54□□□□□ -0.88
CLSTN3-206ENST00000535668 TAF11Q15544 211 aa9.54□□□□□ -0.88
CLSTN3-206ENST00000535668 BEND6Q5SZJ8 279 aaPredicted RBP9.54□□□□□ -0.88
CLSTN3-206ENST00000535668 TMEM53Q6P2H8 277 aa9.54□□□□□ -0.88
CLSTN3-206ENST00000535668 UNQ6126/PRO20091Q6UXV3 157 aa9.54□□□□□ -0.88
CLSTN3-206ENST00000535668 RINLQ6ZS11 566 aa9.54□□□□□ -0.88
CLSTN3-206ENST00000535668 PATL1Q86TB9 770 aaKnown RBP9.54□□□□□ -0.88
CLSTN3-206ENST00000535668 PEG10Q86TG7 708 aaKnown RBP9.54□□□□□ -0.88
CLSTN3-206ENST00000535668 PAQR4Q8N4S7 273 aaPredicted RBP9.54□□□□□ -0.88
CLSTN3-206ENST00000535668 GPR32P1Q8NGA4 272 aa9.54□□□□□ -0.88
CLSTN3-206ENST00000535668 OR6T1Q8NGN1 323 aa9.54□□□□□ -0.88
CLSTN3-206ENST00000535668 ADAMTS16Q8TE57 1224 aa9.54□□□□□ -0.88
CLSTN3-206ENST00000535668 RASSF5Q8WWW0 418 aa9.54□□□□□ -0.88
CLSTN3-206ENST00000535668 DIRC2Q96SL1 478 aa9.54□□□□□ -0.88
CLSTN3-206ENST00000535668 MCHR1Q99705 422 aa9.54□□□□□ -0.88
CLSTN3-206ENST00000535668 PAIP2Q9BPZ3 127 aaKnown RBP9.54□□□□□ -0.88
CLSTN3-206ENST00000535668 PRSS27Q9BQR3 290 aa9.54□□□□□ -0.88
CLSTN3-206ENST00000535668 SUCNR1Q9BXA5 334 aa9.54□□□□□ -0.88
CLSTN3-206ENST00000535668 LRMDAQ9H2I8 198 aa9.54□□□□□ -0.88
CLSTN3-206ENST00000535668 RABEP2Q9H5N1 569 aa9.54□□□□□ -0.88
CLSTN3-206ENST00000535668 OCEL1Q9H607 264 aa9.54□□□□□ -0.88
CLSTN3-206ENST00000535668 ZNF696Q9H7X3 374 aa9.54□□□□□ -0.88
CLSTN3-206ENST00000535668 KAT8Q9H7Z6 458 aaKnown RBP9.54□□□□□ -0.88
CLSTN3-206ENST00000535668 ZMAT3Q9HA38 289 aaKnown RBP9.54□□□□□ -0.88
CLSTN3-206ENST00000535668 NTN4Q9HB63 628 aa9.54□□□□□ -0.88
CLSTN3-206ENST00000535668 CYSLTR2Q9NS75 346 aa9.54□□□□□ -0.88
CLSTN3-206ENST00000535668 NKIRAS1Q9NYS0 192 aa9.54□□□□□ -0.88
CLSTN3-206ENST00000535668 TAAR3PQ9P1P4 343 aa9.54□□□□□ -0.88
CLSTN3-206ENST00000535668 OPN4Q9UHM6 478 aa9.54□□□□□ -0.88
CLSTN3-206ENST00000535668 DUSP13Q9UII6 198 aa9.54□□□□□ -0.88
CLSTN3-206ENST00000535668 ANGPT4Q9Y264 503 aa9.54□□□□□ -0.88
CLSTN3-206ENST00000535668 IGHV1-69-2A0A0G2JMI3 117 aa9.53□□□□□ -0.88
CLSTN3-206ENST00000535668 CLDN34H7C241 214 aa9.53□□□□□ -0.88
CLSTN3-206ENST00000535668 M0QX08 132 aa9.53□□□□□ -0.88
CLSTN3-206ENST00000535668 POLR3GO15318 223 aaPredicted RBP9.53□□□□□ -0.88
CLSTN3-206ENST00000535668 PPIHO43447 177 aaKnown RBP9.53□□□□□ -0.88
CLSTN3-206ENST00000535668 WIPF1O43516 503 aa9.53□□□□□ -0.88
CLSTN3-206ENST00000535668 UBOX5O94941 541 aa9.53□□□□□ -0.88
CLSTN3-206ENST00000535668 CLPTM1O96005 669 aa9.53□□□□□ -0.88
CLSTN3-206ENST00000535668 MT-ND5P03915 603 aa9.53□□□□□ -0.88
CLSTN3-206ENST00000535668 VIMP08670 466 aaKnown RBP9.53□□□□□ -0.88
CLSTN3-206ENST00000535668 PPIAL4GP0DN37 164 aa9.53□□□□□ -0.88
CLSTN3-206ENST00000535668 THRBP10828 461 aa9.53□□□□□ -0.88
CLSTN3-206ENST00000535668 NR2C1P13056 603 aa9.53□□□□□ -0.88
CLSTN3-206ENST00000535668 CD247P20963 164 aa9.53□□□□□ -0.88
CLSTN3-206ENST00000535668 AHCYP23526 432 aa9.53□□□□□ -0.88
CLSTN3-206ENST00000535668 MAGEB1P43366 347 aa9.53□□□□□ -0.88
CLSTN3-206ENST00000535668 IDH3AP50213 366 aa9.53□□□□□ -0.88
CLSTN3-206ENST00000535668 GZMMP51124 257 aa9.53□□□□□ -0.88
CLSTN3-206ENST00000535668 CRYBA2P53672 197 aa9.53□□□□□ -0.88
CLSTN3-206ENST00000535668 MAD2L1BPQ15013 274 aaPredicted RBP9.53□□□□□ -0.88
CLSTN3-206ENST00000535668 TBC1D28Q2M2D7 210 aa9.53□□□□□ -0.88
CLSTN3-206ENST00000535668 HSP90B2PQ58FF3 399 aa9.53□□□□□ -0.88
CLSTN3-206ENST00000535668 ENTPD8Q5MY95 495 aa9.53□□□□□ -0.88
CLSTN3-206ENST00000535668 ARMC4Q5T2S8 1044 aa9.53□□□□□ -0.88
CLSTN3-206ENST00000535668 FAM27BQ5VT28 67 aa9.53□□□□□ -0.88
CLSTN3-206ENST00000535668 CARD17Q5XLA6 110 aa9.53□□□□□ -0.88
CLSTN3-206ENST00000535668 TMEM154Q6P9G4 183 aa9.53□□□□□ -0.88
CLSTN3-206ENST00000535668 FOXL2NBQ6ZUU3 175 aa9.53□□□□□ -0.88
CLSTN3-206ENST00000535668 TSPYL5Q86VY4 417 aaPredicted RBP9.53□□□□□ -0.88
CLSTN3-206ENST00000535668 ANKRD42Q8N9B4 389 aa9.53□□□□□ -0.88
CLSTN3-206ENST00000535668 FAM156AQ8NDB6 213 aa9.53□□□□□ -0.88
CLSTN3-206ENST00000535668 CPEB3Q8NE35 698 aaKnown RBP9.53□□□□□ -0.88
CLSTN3-206ENST00000535668 NANPQ8TBE9 248 aa9.53□□□□□ -0.88
CLSTN3-206ENST00000535668 FNDC8Q8TC99 324 aa9.53□□□□□ -0.88
CLSTN3-206ENST00000535668 MCHR2Q969V1 340 aa9.53□□□□□ -0.88
CLSTN3-206ENST00000535668 MARS2Q96GW9 593 aaKnown RBP9.53□□□□□ -0.88
CLSTN3-206ENST00000535668 POM121L2Q96KW2 1035 aa9.53□□□□□ -0.88
CLSTN3-206ENST00000535668 ZNF747Q9BV97 191 aa9.53□□□□□ -0.88
CLSTN3-206ENST00000535668 TMBIM4Q9HC24 238 aa9.53□□□□□ -0.88
CLSTN3-206ENST00000535668 MEPEQ9NQ76 525 aaPredicted RBP9.53□□□□□ -0.88
CLSTN3-206ENST00000535668 SLC13A4Q9UKG4 626 aa9.53□□□□□ -0.88
CLSTN3-206ENST00000535668 WIPI2Q9Y4P8 454 aa9.53□□□□□ -0.88
CLSTN3-206ENST00000535668 WNK1Q9H4A3 2382 aa9.53□□□□□ -0.88
CLSTN3-206ENST00000535668 A0A1W2PPW3 197 aa9.52□□□□□ -0.89
CLSTN3-206ENST00000535668 GMNCA6NCL1 334 aa9.52□□□□□ -0.89
CLSTN3-206ENST00000535668 A8MXK9 166 aa9.52□□□□□ -0.89
CLSTN3-206ENST00000535668 CLDN25C9JDP6 229 aa9.52□□□□□ -0.89
CLSTN3-206ENST00000535668 OR6A2O95222 327 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms