RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 EEF2KO00418 725 aaKnown RBP2.81□□□□□ -1.96
USP48-215ENST00000534705 CDX4O14627 284 aaPredicted RBP2.81□□□□□ -1.96
USP48-215ENST00000534705 SURF4O15260 269 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 PSMD3O43242 534 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 NME2P1O60361 137 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 PRAF2O60831 178 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 LRP3O75074 770 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 GMNNO75496 209 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 CLN5O75503 358 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 ZMPSTE24O75844 475 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 SEMA3DO95025 777 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 POP4O95707 220 aaKnown RBP2.81□□□□□ -1.96
USP48-215ENST00000534705 PTTG1O95997 202 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 GSRP00390 522 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 FGF4P08620 206 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 H2AFZP0C0S5 128 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 ZNF806P0C7X5 589 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 CLUP10909 449 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 CD59P13987 128 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 DRD5P21918 477 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 GATA2P23769 480 aaPredicted RBP2.81□□□□□ -1.96
USP48-215ENST00000534705 CCR1P32246 355 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 DRD3P35462 400 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 CHI3L1P36222 383 aaPredicted RBP2.81□□□□□ -1.96
USP48-215ENST00000534705 TAGLN2P37802 199 aaKnown RBP2.81□□□□□ -1.96
USP48-215ENST00000534705 CSKP41240 450 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 SLC1A3P43003 542 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 STK19P49842 368 aaPredicted RBP2.81□□□□□ -1.96
USP48-215ENST00000534705 CSRP3P50461 194 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 HLCSP50747 726 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 ARHGDIBP52566 201 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 BLVRAP53004 296 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 SUCLG1P53597 346 aaKnown RBP2.81□□□□□ -1.96
USP48-215ENST00000534705 AIF1P55008 147 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 OR1D5P58170 312 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 ESRRGP62508 458 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 RPL23AP62750 156 aaKnown RBP2.81□□□□□ -1.96
USP48-215ENST00000534705 CACNG1Q06432 222 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 PAX8Q06710 450 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 RASGEF1BQ0VAM2 473 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 NME3Q13232 169 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 AQP6Q13520 282 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 ARHGAP19Q14CB8 494 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 SF3A2Q15428 464 aaKnown RBP2.81□□□□□ -1.96
USP48-215ENST00000534705 LTB4RQ15722 352 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 SSX2Q16385 188 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 ZNF239Q16600 458 aaKnown RBP2.81□□□□□ -1.96
USP48-215ENST00000534705 TATDN3Q17R31 274 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 POM121L1PQ3SYA9 428 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 EOGTQ5NDL2 527 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 FAM182AQ5T1J6 154 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 C9orf64Q5T6V5 341 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 AADACL4Q5VUY2 407 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 UBE2UQ5VVX9 321 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 NCR3LG1Q68D85 454 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 XAF1Q6GPH4 301 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 ZNF343Q6P1L6 599 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 XKRXQ6PP77 449 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 BTNL8Q6UX41 500 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 TFAP2EQ6VUC0 442 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 C3P1Q6ZMU1 363 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 TMEM26Q6ZUK4 368 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 GPRIN3Q6ZVF9 776 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 KRTAP5-5Q701N2 237 aaPredicted RBP2.81□□□□□ -1.96
USP48-215ENST00000534705 H2AFVQ71UI9 128 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 ZNF767PQ75MW2 155 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 CHMP1BQ7LBR1 199 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 STRADAQ7RTN6 431 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 EFL1Q7Z2Z2 1120 aaKnown RBP2.81□□□□□ -1.96
USP48-215ENST00000534705 FAM131BQ86XD5 332 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 SLC13A5Q86YT5 568 aaPredicted RBP2.81□□□□□ -1.96
USP48-215ENST00000534705 PSTKQ8IV42 348 aaKnown RBP2.81□□□□□ -1.96
USP48-215ENST00000534705 STHQ8IWL8 128 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 LAX1Q8IWV1 398 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 PHC2Q8IXK0 858 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 UBQLNLQ8IYU4 475 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 PYROXD2Q8N2H3 581 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 CCDC185Q8N715 623 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 ANKFN1Q8N957 763 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 FNDC5Q8NAU1 212 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 TSTD1Q8NFU3 115 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 OR4M2Q8NGB6 313 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 OR4M1Q8NGD0 313 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 OR52H1Q8NGJ2 320 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 OR5H6Q8NGV6 325 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 OR2T3Q8NH03 318 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 OR52J3Q8NH60 311 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 RHOXF1Q8NHV9 184 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 MCOLN3Q8TDD5 553 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 BLOC1S5Q8TDH9 187 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 TFB1MQ8WVM0 346 aaKnown RBP2.81□□□□□ -1.96
USP48-215ENST00000534705 CAPSLQ8WWF8 208 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 RXFP2Q8WXD0 754 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 NCLNQ969V3 563 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 PYCR2Q96C36 320 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 C16orf58Q96GQ5 468 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 C2orf48Q96LS8 159 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 TSSK2Q96PF2 358 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 PEBP4Q96S96 227 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 CYTH2Q99418 400 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms