RNA–Protein interactions for RNA: ENST00000534296.5

CD44-238, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 863 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-238ENST00000534296 HES5Q5TA89 166 aa1.77□□□□□ -2.13
CD44-238ENST00000534296 CARD17Q5XLA6 110 aa1.77□□□□□ -2.13
CD44-238ENST00000534296 CTRB2Q6GPI1 263 aa1.77□□□□□ -2.13
CD44-238ENST00000534296 ANKRD26P1Q6NSI1 321 aa1.77□□□□□ -2.13
CD44-238ENST00000534296 TTC23LQ6PF05 361 aa1.77□□□□□ -2.13
CD44-238ENST00000534296 IL34Q6ZMJ4 242 aa1.77□□□□□ -2.13
CD44-238ENST00000534296 RFLNAQ6ZTI6 216 aa1.77□□□□□ -2.13
CD44-238ENST00000534296 LHFPL3Q86UP9 236 aa1.77□□□□□ -2.13
CD44-238ENST00000534296 PCP2Q8IVA1 136 aa1.77□□□□□ -2.13
CD44-238ENST00000534296 NPBQ8NG41 125 aa1.77□□□□□ -2.13
CD44-238ENST00000534296 ZNF502Q8TBZ5 544 aa1.77□□□□□ -2.13
CD44-238ENST00000534296 FAM110BQ8TC76 370 aa1.77□□□□□ -2.13
CD44-238ENST00000534296 STARD8Q92502 1023 aa1.77□□□□□ -2.13
CD44-238ENST00000534296 MCUR1Q96AQ8 359 aa1.77□□□□□ -2.13
CD44-238ENST00000534296 TM4SF18Q96CE8 201 aa1.77□□□□□ -2.13
CD44-238ENST00000534296 CEP170P1Q96L14 293 aa1.77□□□□□ -2.13
CD44-238ENST00000534296 C12orf42Q96LP6 360 aa1.77□□□□□ -2.13
CD44-238ENST00000534296 GSDMAQ96QA5 445 aa1.77□□□□□ -2.13
CD44-238ENST00000534296 ANP32EQ9BTT0 268 aa1.77□□□□□ -2.13
CD44-238ENST00000534296 PLA2G2FQ9BZM2 168 aa1.77□□□□□ -2.13
CD44-238ENST00000534296 PARP12Q9H0J9 701 aaKnown RBP1.77□□□□□ -2.13
CD44-238ENST00000534296 CDC42EP4Q9H3Q1 356 aaKnown RBP1.77□□□□□ -2.13
CD44-238ENST00000534296 RPF2Q9H7B2 306 aaKnown RBP1.77□□□□□ -2.13
CD44-238ENST00000534296 KCNJ16Q9NPI9 418 aa1.77□□□□□ -2.13
CD44-238ENST00000534296 CLCF1Q9UBD9 225 aa1.77□□□□□ -2.13
CD44-238ENST00000534296 ZNF629Q9UEG4 869 aaPredicted RBP1.77□□□□□ -2.13
CD44-238ENST00000534296 ING4Q9UNL4 249 aa1.77□□□□□ -2.13
CD44-238ENST00000534296 THSD7BQ9C0I4 1608 aa1.77□□□□□ -2.13
CD44-238ENST00000534296 CENPJQ9HC77 1338 aaPredicted RBP1.76□□□□□ -2.13
CD44-238ENST00000534296 IGLV3-22A0A075B6J6 115 aa1.76□□□□□ -2.13
CD44-238ENST00000534296 IGKV2D-24A0A075B6R9 120 aa1.76□□□□□ -2.13
CD44-238ENST00000534296 TRAV39A0A0B4J263 110 aa1.76□□□□□ -2.13
CD44-238ENST00000534296 XKRY2A2RUG3 117 aa1.76□□□□□ -2.13
CD44-238ENST00000534296 HIDE1A8MVS5 230 aa1.76□□□□□ -2.13
CD44-238ENST00000534296 INS-IGF2F8WCM5 200 aa1.76□□□□□ -2.13
CD44-238ENST00000534296 H7C0C1 242 aa1.76□□□□□ -2.13
CD44-238ENST00000534296 AP3B1O00203 1094 aa1.76□□□□□ -2.13
CD44-238ENST00000534296 B4GALT5O43286 388 aa1.76□□□□□ -2.13
CD44-238ENST00000534296 AIFM1O95831 613 aa1.76□□□□□ -2.13
CD44-238ENST00000534296 KRT14P02533 472 aa1.76□□□□□ -2.13
CD44-238ENST00000534296 HLA-DPB1P04440 258 aa1.76□□□□□ -2.13
CD44-238ENST00000534296 ZNF30P17039 623 aa1.76□□□□□ -2.13
CD44-238ENST00000534296 HMOX2P30519 316 aa1.76□□□□□ -2.13
CD44-238ENST00000534296 HNRNPH3P31942 346 aaKnown RBP1.76□□□□□ -2.13
CD44-238ENST00000534296 BTCP35070 178 aa1.76□□□□□ -2.13
CD44-238ENST00000534296 NAA10P41227 235 aaPredicted RBP1.76□□□□□ -2.13
CD44-238ENST00000534296 ATP5OP48047 213 aa1.76□□□□□ -2.13
CD44-238ENST00000534296 NPBWR2P48146 333 aa1.76□□□□□ -2.13
CD44-238ENST00000534296 LHX2P50458 406 aa1.76□□□□□ -2.13
CD44-238ENST00000534296 SSR4P51571 173 aa1.76□□□□□ -2.13
CD44-238ENST00000534296 CCNHP51946 323 aaPredicted RBP1.76□□□□□ -2.13
CD44-238ENST00000534296 NUTF2P61970 127 aaKnown RBP1.76□□□□□ -2.13
CD44-238ENST00000534296 RAP1AP62834 184 aa1.76□□□□□ -2.13
CD44-238ENST00000534296 RPS21P63220 83 aaKnown RBP1.76□□□□□ -2.13
CD44-238ENST00000534296 SLC7A9P82251 487 aa1.76□□□□□ -2.13
CD44-238ENST00000534296 GPNMBQ14956 572 aa1.76□□□□□ -2.13
CD44-238ENST00000534296 WDR43Q15061 677 aaKnown RBP eCLIP1.76□□□□□ -2.13
CD44-238ENST00000534296 SF3A2Q15428 464 aaKnown RBP1.76□□□□□ -2.13
CD44-238ENST00000534296 ZSCAN26Q16670 478 aa1.76□□□□□ -2.13
CD44-238ENST00000534296 XKR7Q5GH72 579 aa1.76□□□□□ -2.13
CD44-238ENST00000534296 PPM1LQ5SGD2 360 aa1.76□□□□□ -2.13
CD44-238ENST00000534296 SLC8B1Q6J4K2 584 aa1.76□□□□□ -2.13
CD44-238ENST00000534296 NANOGP8Q6NSW7 305 aa1.76□□□□□ -2.13
CD44-238ENST00000534296 ZNF493Q6ZR52 646 aa1.76□□□□□ -2.13
CD44-238ENST00000534296 EIF3MQ7L2H7 374 aaKnown RBP1.76□□□□□ -2.13
CD44-238ENST00000534296 PIANPQ8IYJ0 282 aa1.76□□□□□ -2.13
CD44-238ENST00000534296 PLPPR1Q8TBJ4 325 aa1.76□□□□□ -2.13
CD44-238ENST00000534296 SLC38A4Q969I6 547 aa1.76□□□□□ -2.13
CD44-238ENST00000534296 FAM104AQ969W3 186 aa1.76□□□□□ -2.13
CD44-238ENST00000534296 NTAN1Q96AB6 310 aa1.76□□□□□ -2.13
CD44-238ENST00000534296 DNAJC1Q96KC8 554 aaKnown RBP1.76□□□□□ -2.13
CD44-238ENST00000534296 SERPINB12Q96P63 405 aa1.76□□□□□ -2.13
CD44-238ENST00000534296 ATP5SQ99766 215 aa1.76□□□□□ -2.13
CD44-238ENST00000534296 NDFIP1Q9BT67 221 aa1.76□□□□□ -2.13
CD44-238ENST00000534296 SLC25A2Q9BXI2 301 aa1.76□□□□□ -2.13
CD44-238ENST00000534296 DNTTIP1Q9H147 329 aa1.76□□□□□ -2.13
CD44-238ENST00000534296 LINC00597Q9H2U6 94 aa1.76□□□□□ -2.13
CD44-238ENST00000534296 PATZ1Q9HBE1 687 aaKnown RBP1.76□□□□□ -2.13
CD44-238ENST00000534296 DMAP1Q9NPF5 467 aaPredicted RBP1.76□□□□□ -2.13
CD44-238ENST00000534296 UVRAGQ9P2Y5 699 aa1.76□□□□□ -2.13
CD44-238ENST00000534296 CTNNA3Q9UI47 895 aa1.76□□□□□ -2.13
CD44-238ENST00000534296 PITPNC1Q9UKF7 332 aa1.76□□□□□ -2.13
CD44-238ENST00000534296 TMED5Q9Y3A6 229 aa1.76□□□□□ -2.13
CD44-238ENST00000534296 IGLV4-60A0A075B6I1 120 aa1.75□□□□□ -2.13
CD44-238ENST00000534296 IGKV2-28A0A075B6P5 120 aa1.75□□□□□ -2.13
CD44-238ENST00000534296 A0A075B6Q4 140 aa1.75□□□□□ -2.13
CD44-238ENST00000534296 IGHV3-64DA0A0J9YX35 117 aa1.75□□□□□ -2.13
CD44-238ENST00000534296 GLYATL1P3A0A0U1RQE8 302 aa1.75□□□□□ -2.13
CD44-238ENST00000534296 A0A1B0GVI7 797 aa1.75□□□□□ -2.13
CD44-238ENST00000534296 OR6C74A6NCV1 312 aa1.75□□□□□ -2.13
CD44-238ENST00000534296 LYRM9A8MSI8 78 aa1.75□□□□□ -2.13
CD44-238ENST00000534296 C11orf94C9JXX5 98 aa1.75□□□□□ -2.13
CD44-238ENST00000534296 SGK1O00141 431 aa1.75□□□□□ -2.13
CD44-238ENST00000534296 RAB29O14966 203 aa1.75□□□□□ -2.13
CD44-238ENST00000534296 CLOCKO15516 846 aa1.75□□□□□ -2.13
CD44-238ENST00000534296 ANGPTL7O43827 346 aa1.75□□□□□ -2.13
CD44-238ENST00000534296 SS18L1O75177 396 aaPredicted RBP1.75□□□□□ -2.13
CD44-238ENST00000534296 RDH16O75452 317 aa1.75□□□□□ -2.13
CD44-238ENST00000534296 ERLIN1O75477 346 aa1.75□□□□□ -2.13
CD44-238ENST00000534296 OR2J3O76001 311 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms