RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 MED4Q9NPJ6 270 aa8.28□□□□□ -1.08
SSBP3-215ENST00000533946 INIPQ9NRY2 104 aa8.28□□□□□ -1.08
SSBP3-215ENST00000533946 ABCD2Q9UBJ2 740 aa8.28□□□□□ -1.08
SSBP3-215ENST00000533946 BAG5Q9UL15 447 aa8.28□□□□□ -1.08
SSBP3-215ENST00000533946 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.28□□□□□ -1.081e-8■■■■■ 26.8
SSBP3-215ENST00000533946 STAB1Q9NY15 2570 aa8.27□□□□□ -1.08
SSBP3-215ENST00000533946 LOC100509620A0A075B734 347 aa8.27□□□□□ -1.09
SSBP3-215ENST00000533946 CD5LO43866 347 aa8.27□□□□□ -1.09
SSBP3-215ENST00000533946 TMCC2O75069 709 aa8.27□□□□□ -1.09
SSBP3-215ENST00000533946 HIST1H2ABP04908 130 aa8.27□□□□□ -1.09
SSBP3-215ENST00000533946 ANOS1P23352 680 aa8.27□□□□□ -1.09
SSBP3-215ENST00000533946 ARR3P36575 388 aa8.27□□□□□ -1.09
SSBP3-215ENST00000533946 WNT5AP41221 380 aa8.27□□□□□ -1.09
SSBP3-215ENST00000533946 CLRN1P58418 232 aa8.27□□□□□ -1.09
SSBP3-215ENST00000533946 CTXN1P60606 82 aa8.27□□□□□ -1.09
SSBP3-215ENST00000533946 GLO1Q04760 184 aa8.27□□□□□ -1.09
SSBP3-215ENST00000533946 PRKCDQ05655 676 aa8.27□□□□□ -1.09
SSBP3-215ENST00000533946 MAPRE2Q15555 327 aa8.27□□□□□ -1.09
SSBP3-215ENST00000533946 EFNB3Q15768 340 aa8.27□□□□□ -1.09
SSBP3-215ENST00000533946 HSP90B2PQ58FF3 399 aa8.27□□□□□ -1.09
SSBP3-215ENST00000533946 ELFN2Q5R3F8 820 aa8.27□□□□□ -1.09
SSBP3-215ENST00000533946 SPATA46Q5T0L3 261 aa8.27□□□□□ -1.09
SSBP3-215ENST00000533946 C6orf52Q5T4I8 152 aa8.27□□□□□ -1.09
SSBP3-215ENST00000533946 PODNL1Q6PEZ8 512 aa8.27□□□□□ -1.09
SSBP3-215ENST00000533946 CLEC2AQ6UVW9 174 aa8.27□□□□□ -1.09
SSBP3-215ENST00000533946 HIST3H2AQ7L7L0 130 aa8.27□□□□□ -1.09
SSBP3-215ENST00000533946 ZNF101Q8IZC7 436 aa8.27□□□□□ -1.09
SSBP3-215ENST00000533946 FAM169BQ8N8A8 192 aa8.27□□□□□ -1.09
SSBP3-215ENST00000533946 NOXO1Q8NFA2 376 aa8.27□□□□□ -1.09
SSBP3-215ENST00000533946 OR52J3Q8NH60 311 aa8.27□□□□□ -1.09
SSBP3-215ENST00000533946 ZNF519Q8TB69 540 aa8.27□□□□□ -1.09
SSBP3-215ENST00000533946 SLC7A13Q8TCU3 470 aa8.27□□□□□ -1.09
SSBP3-215ENST00000533946 LIPHQ8WWY8 451 aa8.27□□□□□ -1.09
SSBP3-215ENST00000533946 HIST1H2ACQ93077 130 aa8.27□□□□□ -1.09
SSBP3-215ENST00000533946 RASD2Q96D21 266 aa8.27□□□□□ -1.09
SSBP3-215ENST00000533946 FAM46AQ96IP4 442 aaKnown RBP8.27□□□□□ -1.09
SSBP3-215ENST00000533946 Q96M85 177 aa8.27□□□□□ -1.09
SSBP3-215ENST00000533946 SH3GL1Q99961 368 aa8.27□□□□□ -1.09
SSBP3-215ENST00000533946 KCTD14Q9BQ13 255 aaPredicted RBP8.27□□□□□ -1.09
SSBP3-215ENST00000533946 FUZQ9BT04 418 aa8.27□□□□□ -1.09
SSBP3-215ENST00000533946 SLC19A3Q9BZV2 496 aa8.27□□□□□ -1.09
SSBP3-215ENST00000533946 BPESC1Q9GZL8 116 aa8.27□□□□□ -1.09
SSBP3-215ENST00000533946 NMNAT1Q9HAN9 279 aaPredicted RBP8.27□□□□□ -1.09
SSBP3-215ENST00000533946 EMC7Q9NPA0 242 aa8.27□□□□□ -1.09
SSBP3-215ENST00000533946 NDUFAF4Q9P032 175 aa8.27□□□□□ -1.09
SSBP3-215ENST00000533946 HIF3AQ9Y2N7 669 aa8.27□□□□□ -1.09
SSBP3-215ENST00000533946 MED31Q9Y3C7 131 aa8.27□□□□□ -1.09
SSBP3-215ENST00000533946 CACNG2Q9Y698 323 aa8.27□□□□□ -1.09
SSBP3-215ENST00000533946 TENM1Q9UKZ4 2725 aa8.26□□□□□ -1.09
SSBP3-215ENST00000533946 B9A039 149 aa8.26□□□□□ -1.09
SSBP3-215ENST00000533946 GSTA4O15217 222 aa8.26□□□□□ -1.09
SSBP3-215ENST00000533946 SLC22A2O15244 555 aa8.26□□□□□ -1.09
SSBP3-215ENST00000533946 LILRA1O75019 489 aa8.26□□□□□ -1.09
SSBP3-215ENST00000533946 NGFP01138 241 aa8.26□□□□□ -1.09
SSBP3-215ENST00000533946 SEMG1P04279 462 aa8.26□□□□□ -1.09
SSBP3-215ENST00000533946 SERPINA5P05154 406 aa8.26□□□□□ -1.09
SSBP3-215ENST00000533946 HOXB1P14653 301 aaPredicted RBP8.26□□□□□ -1.09
SSBP3-215ENST00000533946 DAOP14920 347 aa8.26□□□□□ -1.09
SSBP3-215ENST00000533946 ZNF32P17041 273 aa8.26□□□□□ -1.09
SSBP3-215ENST00000533946 LAP3P28838 519 aa8.26□□□□□ -1.09
SSBP3-215ENST00000533946 MPV17P39210 176 aa8.26□□□□□ -1.09
SSBP3-215ENST00000533946 RBM34P42696 430 aaKnown RBP8.26□□□□□ -1.09
SSBP3-215ENST00000533946 NR4A2P43354 598 aa8.26□□□□□ -1.09
SSBP3-215ENST00000533946 MAGEB1P43366 347 aa8.26□□□□□ -1.09
SSBP3-215ENST00000533946 SLC9A3P48764 834 aa8.26□□□□□ -1.09
SSBP3-215ENST00000533946 ZNF133P52736 654 aaPredicted RBP8.26□□□□□ -1.09
SSBP3-215ENST00000533946 GNGT1P63211 74 aa8.26□□□□□ -1.09
SSBP3-215ENST00000533946 CHRNB3Q05901 458 aa8.26□□□□□ -1.09
SSBP3-215ENST00000533946 LOXL1Q08397 574 aaPredicted RBP8.26□□□□□ -1.09
SSBP3-215ENST00000533946 PPP1R8Q12972 351 aaKnown RBP8.26□□□□□ -1.09
SSBP3-215ENST00000533946 ENDOGQ14249 297 aaKnown RBP8.26□□□□□ -1.09
SSBP3-215ENST00000533946 SGCAQ16586 387 aa8.26□□□□□ -1.09
SSBP3-215ENST00000533946 C3orf36Q3SXR2 165 aa8.26□□□□□ -1.09
SSBP3-215ENST00000533946 IFI44LQ53G44 452 aa8.26□□□□□ -1.09
SSBP3-215ENST00000533946 ALG10Q5BKT4 473 aa8.26□□□□□ -1.09
SSBP3-215ENST00000533946 MESTQ5EB52 335 aa8.26□□□□□ -1.09
SSBP3-215ENST00000533946 PABPC1L2AQ5JQF8 200 aa8.26□□□□□ -1.09
SSBP3-215ENST00000533946 GLYATQ6IB77 296 aa8.26□□□□□ -1.09
SSBP3-215ENST00000533946 HACD2Q6Y1H2 254 aa8.26□□□□□ -1.09
SSBP3-215ENST00000533946 PIGWQ7Z7B1 504 aa8.26□□□□□ -1.09
SSBP3-215ENST00000533946 OFCC1Q8IZS5 231 aa8.26□□□□□ -1.09
SSBP3-215ENST00000533946 SLC7A6Q92536 515 aa8.26□□□□□ -1.09
SSBP3-215ENST00000533946 MSI2Q96DH6 328 aaKnown RBP8.26□□□□□ -1.09
SSBP3-215ENST00000533946 KCNS3Q9BQ31 491 aa8.26□□□□□ -1.09
SSBP3-215ENST00000533946 WNT5BQ9H1J7 359 aa8.26□□□□□ -1.09
SSBP3-215ENST00000533946 TXNIPQ9H3M7 391 aa8.26□□□□□ -1.09
SSBP3-215ENST00000533946 NARFLQ9H6Q4 476 aa8.26□□□□□ -1.09
SSBP3-215ENST00000533946 ZNF442Q9H7R0 627 aa8.26□□□□□ -1.09
SSBP3-215ENST00000533946 EFCAB1Q9HAE3 211 aa8.26□□□□□ -1.09
SSBP3-215ENST00000533946 TREM2Q9NZC2 230 aa8.26□□□□□ -1.09
SSBP3-215ENST00000533946 CD300AQ9UGN4 299 aa8.26□□□□□ -1.09
SSBP3-215ENST00000533946 ENPP4Q9Y6X5 453 aa8.26□□□□□ -1.09
SSBP3-215ENST00000533946 PMF1-BGLAPU3KQ54 211 aa8.26□□□□□ -1.09
SSBP3-215ENST00000533946 A0A1W2PRG6 482 aa8.25□□□□□ -1.09
SSBP3-215ENST00000533946 GMNCA6NCL1 334 aa8.25□□□□□ -1.09
SSBP3-215ENST00000533946 EFCAB9A8MZ26 197 aa8.25□□□□□ -1.09
SSBP3-215ENST00000533946 DCTN6O00399 190 aa8.25□□□□□ -1.09
SSBP3-215ENST00000533946 AKAP8O43823 692 aaKnown RBP8.25□□□□□ -1.09
SSBP3-215ENST00000533946 CCDC22O60826 627 aa8.25□□□□□ -1.09
SSBP3-215ENST00000533946 PTP4A3O75365 173 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms