RNA–Protein interactions for RNA: ENST00000533733.5

ATM-222, Transcript of ATM serine/threonine kinase, human

TSL 1 (best)

Gene ATM, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-222	ENST00000533733		H7C1C5	153 aa		10.78	□□□□□ -0.68
ATM-222	ENST00000533733	PSMD9	O00233	223 aa		10.78	□□□□□ -0.68
ATM-222	ENST00000533733	SULT1C2	O00338	296 aa		10.78	□□□□□ -0.68
ATM-222	ENST00000533733	FABP7	O15540	132 aa		10.78	□□□□□ -0.68
ATM-222	ENST00000533733	GLS	O94925	669 aa	Predicted RBP	10.78	□□□□□ -0.68
ATM-222	ENST00000533733	HRG	P04196	525 aa		10.78	□□□□□ -0.68
ATM-222	ENST00000533733	CSF1	P09603	554 aa		10.78	□□□□□ -0.68
ATM-222	ENST00000533733	CPN1	P15169	458 aa		10.78	□□□□□ -0.68
ATM-222	ENST00000533733	TAS2R20	P59543	309 aa		10.78	□□□□□ -0.68
ATM-222	ENST00000533733	GNG2	P59768	71 aa		10.78	□□□□□ -0.68
ATM-222	ENST00000533733	LCN6	P62502	163 aa		10.78	□□□□□ -0.68
ATM-222	ENST00000533733	PUDP	Q08623	228 aa		10.78	□□□□□ -0.68
ATM-222	ENST00000533733	MEP1B	Q16820	701 aa		10.78	□□□□□ -0.68
ATM-222	ENST00000533733	GLT8D1	Q68CQ7	371 aa		10.78	□□□□□ -0.68
ATM-222	ENST00000533733	ANKRD16	Q6P6B7	361 aa		10.78	□□□□□ -0.68
ATM-222	ENST00000533733	COX15	Q7KZN9	410 aa		10.78	□□□□□ -0.68
ATM-222	ENST00000533733	KRT77	Q7Z794	578 aa		10.78	□□□□□ -0.68
ATM-222	ENST00000533733	PRSS35	Q8N3Z0	413 aa		10.78	□□□□□ -0.68
ATM-222	ENST00000533733	DTX3	Q8N9I9	347 aa		10.78	□□□□□ -0.68
ATM-222	ENST00000533733	OR52I2	Q8NH67	350 aa		10.78	□□□□□ -0.68
ATM-222	ENST00000533733	STT3B	Q8TCJ2	826 aa		10.78	□□□□□ -0.68
ATM-222	ENST00000533733	TSEN15	Q8WW01	171 aa	Known RBP	10.78	□□□□□ -0.68
ATM-222	ENST00000533733	GIMAP1	Q8WWP7	306 aa		10.78	□□□□□ -0.68
ATM-222	ENST00000533733	NXPE2	Q96DL1	559 aa		10.78	□□□□□ -0.68
ATM-222	ENST00000533733	ELF4	Q99607	663 aa	Predicted RBP	10.78	□□□□□ -0.68
ATM-222	ENST00000533733	RTN4R	Q9BZR6	473 aa		10.78	□□□□□ -0.68
ATM-222	ENST00000533733	TTYH1	Q9H313	450 aa	Predicted RBP	10.78	□□□□□ -0.68
ATM-222	ENST00000533733	CCDC86	Q9H6F5	360 aa	Known RBP	10.78	□□□□□ -0.68
ATM-222	ENST00000533733	AUNIP	Q9H7T9	357 aa		10.78	□□□□□ -0.68
ATM-222	ENST00000533733	ELOVL3	Q9HB03	270 aa		10.78	□□□□□ -0.68
ATM-222	ENST00000533733	SLCO1C1	Q9NYB5	712 aa		10.78	□□□□□ -0.68
ATM-222	ENST00000533733	C19orf25	Q9UFG5	118 aa	Predicted RBP	10.78	□□□□□ -0.68
ATM-222	ENST00000533733	ZNF222	Q9UK12	451 aa		10.78	□□□□□ -0.68
ATM-222	ENST00000533733	RCE1	Q9Y256	329 aa		10.78	□□□□□ -0.68
ATM-222	ENST00000533733	TNRC18	O15417	2968 aa	Predicted RBP	10.78	□□□□□ -0.68
ATM-222	ENST00000533733	CDC14C	A4D256	554 aa		10.78	□□□□□ -0.68
ATM-222	ENST00000533733	SNRPGP15	A8MWD9	76 aa		10.78	□□□□□ -0.68
ATM-222	ENST00000533733	SLC17A2	O00624	439 aa		10.78	□□□□□ -0.68
ATM-222	ENST00000533733	PRKN	O60260	465 aa	Predicted RBP	10.78	□□□□□ -0.68
ATM-222	ENST00000533733	SLC16A7	O60669	478 aa		10.78	□□□□□ -0.68
ATM-222	ENST00000533733	RBBP9	O75884	186 aa		10.78	□□□□□ -0.68
ATM-222	ENST00000533733	AQP8	O94778	261 aa		10.78	□□□□□ -0.68
ATM-222	ENST00000533733	MT-ND4	P03905	459 aa		10.78	□□□□□ -0.68
ATM-222	ENST00000533733	HEXB	P07686	556 aa		10.78	□□□□□ -0.68
ATM-222	ENST00000533733	GIMD1	P0DJR0	217 aa		10.78	□□□□□ -0.68
ATM-222	ENST00000533733	CD37	P11049	281 aa		10.78	□□□□□ -0.68
ATM-222	ENST00000533733	ADRA2C	P18825	462 aa		10.78	□□□□□ -0.68
ATM-222	ENST00000533733	CDK2	P24941	298 aa		10.78	□□□□□ -0.68
ATM-222	ENST00000533733	FKBP2	P26885	142 aa	Known RBP	10.78	□□□□□ -0.68
ATM-222	ENST00000533733	KIR3DL2	P43630	455 aa		10.78	□□□□□ -0.68
ATM-222	ENST00000533733	CXCL12	P48061	93 aa		10.78	□□□□□ -0.68
ATM-222	ENST00000533733	EFNA3	P52797	238 aa		10.78	□□□□□ -0.68
ATM-222	ENST00000533733	GPR85	P60893	370 aa		10.78	□□□□□ -0.68
ATM-222	ENST00000533733	INSM1	Q01101	510 aa	Predicted RBP	10.78	□□□□□ -0.68
ATM-222	ENST00000533733	IKZF1	Q13422	519 aa		10.78	□□□□□ -0.68
ATM-222	ENST00000533733	CLPP	Q16740	277 aa	Predicted RBP	10.78	□□□□□ -0.68
ATM-222	ENST00000533733	PCK2	Q16822	640 aa		10.78	□□□□□ -0.68
ATM-222	ENST00000533733	COL28A1	Q2UY09	1125 aa		10.78	□□□□□ -0.68
ATM-222	ENST00000533733	SLC25A53	Q5H9E4	307 aa		10.78	□□□□□ -0.68
ATM-222	ENST00000533733	WDR38	Q5JTN6	314 aa		10.78	□□□□□ -0.68
ATM-222	ENST00000533733	ESPNL	Q6ZVH7	1005 aa		10.78	□□□□□ -0.68
ATM-222	ENST00000533733	PRSS45	Q7RTY3	260 aa		10.78	□□□□□ -0.68
ATM-222	ENST00000533733	HDDC2	Q7Z4H3	204 aa		10.78	□□□□□ -0.68
ATM-222	ENST00000533733	ANKRD37	Q7Z713	158 aa		10.78	□□□□□ -0.68
ATM-222	ENST00000533733	BPHL	Q86WA6	291 aa	Predicted RBP	10.78	□□□□□ -0.68
ATM-222	ENST00000533733	C9orf62	Q8N4C0	152 aa		10.78	□□□□□ -0.68
ATM-222	ENST00000533733	SPIC	Q8N5J4	248 aa		10.78	□□□□□ -0.68
ATM-222	ENST00000533733	ADPRHL1	Q8NDY3	354 aa		10.78	□□□□□ -0.68
ATM-222	ENST00000533733	OR52N5	Q8NH56	324 aa		10.78	□□□□□ -0.68
ATM-222	ENST00000533733	ZNF431	Q8TF32	576 aa	Predicted RBP	10.78	□□□□□ -0.68
ATM-222	ENST00000533733	DUSP19	Q8WTR2	217 aa		10.78	□□□□□ -0.68
ATM-222	ENST00000533733	C8orf44	Q96CB5	159 aa		10.78	□□□□□ -0.68
ATM-222	ENST00000533733	FOXQ1	Q9C009	403 aa		10.78	□□□□□ -0.68
ATM-222	ENST00000533733	KCNG2	Q9UJ96	466 aa		10.78	□□□□□ -0.68
ATM-222	ENST00000533733	DHDH	Q9UQ10	334 aa		10.78	□□□□□ -0.68
ATM-222	ENST00000533733	BOLA1	Q9Y3E2	137 aa		10.78	□□□□□ -0.68
ATM-222	ENST00000533733	HSPB11	Q9Y547	144 aa		10.78	□□□□□ -0.68
ATM-222	ENST00000533733	GON4L	Q3T8J9	2241 aa		10.78	□□□□□ -0.68
ATM-222	ENST00000533733	ABCA7	Q8IZY2	2146 aa		10.77	□□□□□ -0.69
ATM-222	ENST00000533733	IGLV3-32	A0A0A0MS00	114 aa		10.77	□□□□□ -0.69
ATM-222	ENST00000533733	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		10.77	□□□□□ -0.69
ATM-222	ENST00000533733	CCDC163	A0A0D9SF12	145 aa		10.77	□□□□□ -0.69
ATM-222	ENST00000533733	NPIPA5	E9PKD4	350 aa		10.77	□□□□□ -0.69
ATM-222	ENST00000533733		H7C417	338 aa		10.77	□□□□□ -0.69
ATM-222	ENST00000533733	YKT6	O15498	198 aa		10.77	□□□□□ -0.69
ATM-222	ENST00000533733	SSNA1	O43805	119 aa		10.77	□□□□□ -0.69
ATM-222	ENST00000533733	ALOX12B	O75342	701 aa		10.77	□□□□□ -0.69
ATM-222	ENST00000533733	ISG15	P05161	165 aa		10.77	□□□□□ -0.69
ATM-222	ENST00000533733	ZNF823	P16415	610 aa		10.77	□□□□□ -0.69
ATM-222	ENST00000533733	CSRP1	P21291	193 aa	Known RBP	10.77	□□□□□ -0.69
ATM-222	ENST00000533733	ACHE	P22303	614 aa		10.77	□□□□□ -0.69
ATM-222	ENST00000533733	DCTD	P32321	178 aa		10.77	□□□□□ -0.69
ATM-222	ENST00000533733	SOX2	P48431	317 aa		10.77	□□□□□ -0.69
ATM-222	ENST00000533733	RGS19	P49795	217 aa		10.77	□□□□□ -0.69
ATM-222	ENST00000533733	CCR6	P51684	374 aa		10.77	□□□□□ -0.69
ATM-222	ENST00000533733	ADAM8	P78325	824 aa		10.77	□□□□□ -0.69
ATM-222	ENST00000533733	DMWD	Q09019	674 aa		10.77	□□□□□ -0.69
ATM-222	ENST00000533733	NR0B2	Q15466	257 aa		10.77	□□□□□ -0.69
ATM-222	ENST00000533733	RAB11B	Q15907	218 aa		10.77	□□□□□ -0.69
ATM-222	ENST00000533733		Q5BKY6	102 aa		10.77	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms