RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 GSG1Q2KHT4 349 aa17.77■□□□□ 0.44
CCS-208ENST00000533244 C1orf94Q6P1W5 598 aa17.77■□□□□ 0.44
CCS-208ENST00000533244 SLC25A47Q6Q0C1 308 aa17.77■□□□□ 0.44
CCS-208ENST00000533244 SKA3Q8IX90 412 aa17.77■□□□□ 0.44
CCS-208ENST00000533244 ADGRG5Q8IZF4 528 aa17.77■□□□□ 0.44
CCS-208ENST00000533244 TRAF4Q9BUZ4 470 aaPredicted RBP17.77■□□□□ 0.44
CCS-208ENST00000533244 POU2F3Q9UKI9 436 aa17.77■□□□□ 0.44
CCS-208ENST00000533244 TMCC3Q9ULS5 477 aa17.77■□□□□ 0.44
CCS-208ENST00000533244 GSC2O15499 205 aa17.76■□□□□ 0.43
CCS-208ENST00000533244 OR10H3O60404 316 aa17.76■□□□□ 0.43
CCS-208ENST00000533244 UBL3O95164 117 aa17.76■□□□□ 0.43
CCS-208ENST00000533244 STAMBPO95630 424 aa17.76■□□□□ 0.43
CCS-208ENST00000533244 CRYAAP02489 173 aa17.76■□□□□ 0.43
CCS-208ENST00000533244 RAP2AP10114 183 aa17.76■□□□□ 0.43
CCS-208ENST00000533244 ZNF14P17017 642 aaPredicted RBP17.76■□□□□ 0.43
CCS-208ENST00000533244 CALCRP30988 508 aa17.76■□□□□ 0.43
CCS-208ENST00000533244 RPL4P36578 427 aaKnown RBP17.76■□□□□ 0.43
CCS-208ENST00000533244 CAPZA2P47755 286 aa17.76■□□□□ 0.43
CCS-208ENST00000533244 ZNF84P51523 738 aa17.76■□□□□ 0.43
CCS-208ENST00000533244 IDH3GP51553 393 aaPredicted RBP17.76■□□□□ 0.43
CCS-208ENST00000533244 CD47Q08722 323 aa17.76■□□□□ 0.43
CCS-208ENST00000533244 THEM4Q5T1C6 240 aa17.76■□□□□ 0.43
CCS-208ENST00000533244 ZNF544Q6NX49 715 aa17.76■□□□□ 0.43
CCS-208ENST00000533244 PGBD2Q6P3X8 592 aa17.76■□□□□ 0.43
CCS-208ENST00000533244 CLDN22Q8N7P3 220 aa17.76■□□□□ 0.43
CCS-208ENST00000533244 FGFBP3Q8TAT2 258 aa17.76■□□□□ 0.43
CCS-208ENST00000533244 Q96M85 177 aa17.76■□□□□ 0.43
CCS-208ENST00000533244 CADM1Q9BY67 442 aaKnown RBP17.76■□□□□ 0.43
CCS-208ENST00000533244 CXorf56Q9H5V9 222 aa17.76■□□□□ 0.43
CCS-208ENST00000533244 FAIMQ9NVQ4 179 aa17.76■□□□□ 0.43
CCS-208ENST00000533244 USF3Q68DE3 2245 aa17.76■□□□□ 0.43
CCS-208ENST00000533244 ZNF469Q96JG9 3925 aaPredicted RBP17.76■□□□□ 0.43
CCS-208ENST00000533244 TNFRSF11BO00300 401 aa17.75■□□□□ 0.43
CCS-208ENST00000533244 MGRN1O60291 552 aa17.75■□□□□ 0.43
CCS-208ENST00000533244 CD79AP11912 226 aa17.75■□□□□ 0.43
CCS-208ENST00000533244 TTKP33981 857 aa17.75■□□□□ 0.43
CCS-208ENST00000533244 IFNGR2P38484 337 aa17.75■□□□□ 0.43
CCS-208ENST00000533244 PTH2RP49190 550 aa17.75■□□□□ 0.43
CCS-208ENST00000533244 ADAM8P78325 824 aa17.75■□□□□ 0.43
CCS-208ENST00000533244 MRPS34P82930 218 aaKnown RBP17.75■□□□□ 0.43
CCS-208ENST00000533244 MESTQ5EB52 335 aa17.75■□□□□ 0.43
CCS-208ENST00000533244 C11orf71Q6IPW1 123 aa17.75■□□□□ 0.43
CCS-208ENST00000533244 ZNF770Q6IQ21 691 aaPredicted RBP17.75■□□□□ 0.43
CCS-208ENST00000533244 SMARCD3Q6STE5 483 aa17.75■□□□□ 0.43
CCS-208ENST00000533244 DPY19L2P2Q6ZN68 376 aa17.75■□□□□ 0.43
CCS-208ENST00000533244 FOXL2NBQ6ZUU3 175 aa17.75■□□□□ 0.43
CCS-208ENST00000533244 LINC00471Q8N535 108 aa17.75■□□□□ 0.43
CCS-208ENST00000533244 NABP1Q96AH0 204 aa17.75■□□□□ 0.43
CCS-208ENST00000533244 RBP7Q96R05 134 aa17.75■□□□□ 0.43
CCS-208ENST00000533244 VNN3Q9NY84 501 aa17.75■□□□□ 0.43
CCS-208ENST00000533244 GRHPRQ9UBQ7 328 aa17.75■□□□□ 0.43
CCS-208ENST00000533244 POMPQ9Y244 141 aa17.75■□□□□ 0.43
CCS-208ENST00000533244 ATP23Q9Y6H3 246 aa17.75■□□□□ 0.43
CCS-208ENST00000533244 AHCYL1O43865 530 aa17.74■□□□□ 0.43
CCS-208ENST00000533244 ATP5HO75947 161 aa17.74■□□□□ 0.43
CCS-208ENST00000533244 FARS2O95363 451 aaKnown RBP17.74■□□□□ 0.43
CCS-208ENST00000533244 TXNDC12O95881 172 aa17.74■□□□□ 0.43
CCS-208ENST00000533244 APEHP13798 732 aaKnown RBP17.74■□□□□ 0.43
CCS-208ENST00000533244 SDHAP31040 664 aa17.74■□□□□ 0.43
CCS-208ENST00000533244 RAB1AP62820 205 aa17.74■□□□□ 0.43
CCS-208ENST00000533244 NKX6-1P78426 367 aaPredicted RBP17.74■□□□□ 0.43
CCS-208ENST00000533244 NPRL3Q12980 569 aa17.74■□□□□ 0.43
CCS-208ENST00000533244 TSPAN31Q12999 210 aa17.74■□□□□ 0.43
CCS-208ENST00000533244 GPR139Q6DWJ6 353 aa17.74■□□□□ 0.43
CCS-208ENST00000533244 OR2T5Q6IEZ7 315 aa17.74■□□□□ 0.43
CCS-208ENST00000533244 DPPA2Q7Z7J5 298 aa17.74■□□□□ 0.43
CCS-208ENST00000533244 IL17RDQ8NFM7 739 aa17.74■□□□□ 0.43
CCS-208ENST00000533244 OR2T29Q8NH02 315 aa17.74■□□□□ 0.43
CCS-208ENST00000533244 GNPDA2Q8TDQ7 276 aa17.74■□□□□ 0.43
CCS-208ENST00000533244 CANT1Q8WVQ1 401 aa17.74■□□□□ 0.43
CCS-208ENST00000533244 HTRA1Q92743 480 aa17.74■□□□□ 0.43
CCS-208ENST00000533244 ZNF570Q96NI8 536 aa17.74■□□□□ 0.43
CCS-208ENST00000533244 SH3GL3Q99963 347 aa17.74■□□□□ 0.43
CCS-208ENST00000533244 SLC7A8Q9UHI5 535 aa17.74■□□□□ 0.43
CCS-208ENST00000533244 FBXL3Q9UKT7 428 aa17.74■□□□□ 0.43
CCS-208ENST00000533244 IGHV2OR16-5A0A0B4J2B6 119 aa17.73■□□□□ 0.43
CCS-208ENST00000533244 DHRS12A0PJE2 317 aa17.73■□□□□ 0.43
CCS-208ENST00000533244 SLC22A23A1A5C7 686 aa17.73■□□□□ 0.43
CCS-208ENST00000533244 ARHGEF9O43307 516 aa17.73■□□□□ 0.43
CCS-208ENST00000533244 HOXB6P17509 224 aaKnown RBP17.73■□□□□ 0.43
CCS-208ENST00000533244 GIPRP48546 466 aa17.73■□□□□ 0.43
CCS-208ENST00000533244 PIGFQ07326 219 aa17.73■□□□□ 0.43
CCS-208ENST00000533244 KRR1Q13601 381 aaKnown RBP17.73■□□□□ 0.43
CCS-208ENST00000533244 FLOT2Q14254 428 aa17.73■□□□□ 0.43
CCS-208ENST00000533244 RFX4Q33E94 735 aa17.73■□□□□ 0.43
CCS-208ENST00000533244 AGAP6Q5VW22 663 aa17.73■□□□□ 0.43
CCS-208ENST00000533244 SHEQ5VZ18 495 aa17.73■□□□□ 0.43
CCS-208ENST00000533244 TGIF2LYQ8IUE0 185 aa17.73■□□□□ 0.43
CCS-208ENST00000533244 OR9Q2Q8NGE9 314 aa17.73■□□□□ 0.43
CCS-208ENST00000533244 FANK1Q8TC84 345 aa17.73■□□□□ 0.43
CCS-208ENST00000533244 MS4A3Q96HJ5 214 aa17.73■□□□□ 0.43
CCS-208ENST00000533244 KCNS3Q9BQ31 491 aa17.73■□□□□ 0.43
CCS-208ENST00000533244 CHID1Q9BWS9 393 aa17.73■□□□□ 0.43
CCS-208ENST00000533244 OR52D1Q9H346 318 aa17.73■□□□□ 0.43
CCS-208ENST00000533244 SIAEQ9HAT2 523 aa17.73■□□□□ 0.43
CCS-208ENST00000533244 IL20RAQ9UHF4 553 aa17.73■□□□□ 0.43
CCS-208ENST00000533244 TEX13CA0A0J9YWL9 993 aa17.72■□□□□ 0.43
CCS-208ENST00000533244 TCRBV3S1A0A5B6 114 aa17.72■□□□□ 0.43
CCS-208ENST00000533244 PRSS37A4D1T9 235 aa17.72■□□□□ 0.43
CCS-208ENST00000533244 RAB36O95755 333 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms