RNA–Protein interactions for RNA: ENST00000533001.1

KNL1-211, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,923 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-211ENST00000533001 SLC25A43Q8WUT9 341 aaPredicted RBP1.31□□□□□ -2.2
KNL1-211ENST00000533001 TMEM106AQ96A25 262 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 OR52B2Q96RD2 323 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 TMEM109Q9BVC6 243 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 ROGDIQ9GZN7 287 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 AKTIPQ9H8T0 292 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 TMEM106BQ9NUM4 274 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 THAP1Q9NVV9 213 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 KCNS2Q9ULS6 477 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 MGAT4BQ9UQ53 548 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 MRPS33Q9Y291 106 aaKnown RBP1.31□□□□□ -2.2
KNL1-211ENST00000533001 PCDHB14Q9Y5E9 798 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 TMED7-TICAM2A0A0A6YYA0 188 aa1.3□□□□□ -2.2
KNL1-211ENST00000533001 TRAV40A0A0B4J280 105 aa1.3□□□□□ -2.2
KNL1-211ENST00000533001 IGKV1-9A0A0C4DH69 117 aa1.3□□□□□ -2.2
KNL1-211ENST00000533001 PIP5K1BO14986 540 aa1.3□□□□□ -2.2
KNL1-211ENST00000533001 GPANK1O95872 356 aa1.3□□□□□ -2.2
KNL1-211ENST00000533001 C6orf47O95873 294 aa1.3□□□□□ -2.2
KNL1-211ENST00000533001 SYF2O95926 243 aaKnown RBP1.3□□□□□ -2.2
KNL1-211ENST00000533001 RPLP1P05386 114 aaKnown RBP1.3□□□□□ -2.2
KNL1-211ENST00000533001 GPIP06744 558 aa1.3□□□□□ -2.2
KNL1-211ENST00000533001 PIK3R1P27986 724 aa1.3□□□□□ -2.2
KNL1-211ENST00000533001 PSMB8P28062 276 aa1.3□□□□□ -2.2
KNL1-211ENST00000533001 CD34P28906 385 aa1.3□□□□□ -2.2
KNL1-211ENST00000533001 CD200P41217 278 aa1.3□□□□□ -2.2
KNL1-211ENST00000533001 GP2P55259 537 aaKnown RBP1.3□□□□□ -2.2
KNL1-211ENST00000533001 PKNOX1P55347 436 aa1.3□□□□□ -2.2
KNL1-211ENST00000533001 RAG2P55895 527 aa1.3□□□□□ -2.2
KNL1-211ENST00000533001 CTBP2P56545 445 aa1.3□□□□□ -2.2
KNL1-211ENST00000533001 GUCY1A3Q02108 690 aa1.3□□□□□ -2.2
KNL1-211ENST00000533001 SNTB2Q13425 540 aaKnown RBP1.3□□□□□ -2.2
KNL1-211ENST00000533001 DDX39BQ13838 428 aaKnown RBP1.3□□□□□ -2.2
KNL1-211ENST00000533001 CEACAM7Q14002 265 aa1.3□□□□□ -2.2
KNL1-211ENST00000533001 GK2Q14410 553 aaPredicted RBP1.3□□□□□ -2.2
KNL1-211ENST00000533001 SEC23BQ15437 767 aa1.3□□□□□ -2.2
KNL1-211ENST00000533001 OR8B8Q15620 311 aa1.3□□□□□ -2.2
KNL1-211ENST00000533001 WDR82Q6UXN9 313 aa1.3□□□□□ -2.2
KNL1-211ENST00000533001 SLC29A4Q7RTT9 530 aa1.3□□□□□ -2.2
KNL1-211ENST00000533001 ODF3L1Q8IXM7 274 aa1.3□□□□□ -2.2
KNL1-211ENST00000533001 KRT78Q8N1N4 520 aa1.3□□□□□ -2.2
KNL1-211ENST00000533001 Q8N3U1 123 aa1.3□□□□□ -2.2
KNL1-211ENST00000533001 ZNF781Q8N8C0 355 aa1.3□□□□□ -2.2
KNL1-211ENST00000533001 GPATCH11Q8N954 259 aa1.3□□□□□ -2.2
KNL1-211ENST00000533001 OR4K17Q8NGC6 315 aa1.3□□□□□ -2.2
KNL1-211ENST00000533001 OR11H6Q8NGC7 330 aa1.3□□□□□ -2.2
KNL1-211ENST00000533001 OR5AK3PQ8NH89 298 aa1.3□□□□□ -2.2
KNL1-211ENST00000533001 MOSPD2Q8NHP6 518 aa1.3□□□□□ -2.2
KNL1-211ENST00000533001 CALML6Q8TD86 181 aa1.3□□□□□ -2.2
KNL1-211ENST00000533001 RAX2Q96IS3 184 aa1.3□□□□□ -2.2
KNL1-211ENST00000533001 SAMD8Q96LT4 415 aa1.3□□□□□ -2.2
KNL1-211ENST00000533001 PAFAH2Q99487 392 aa1.3□□□□□ -2.2
KNL1-211ENST00000533001 ACTRT3Q9BYD9 372 aa1.3□□□□□ -2.2
KNL1-211ENST00000533001 C7orf69Q9H7B7 122 aa1.3□□□□□ -2.2
KNL1-211ENST00000533001 EVA1AQ9H8M9 152 aa1.3□□□□□ -2.2
KNL1-211ENST00000533001 SMURF2Q9HAU4 748 aa1.3□□□□□ -2.2
KNL1-211ENST00000533001 ZCCHC3Q9NUD5 404 aaKnown RBP1.3□□□□□ -2.2
KNL1-211ENST00000533001 GIMAP4Q9NUV9 329 aa1.3□□□□□ -2.2
KNL1-211ENST00000533001 ALKBH4Q9NXW9 302 aa1.3□□□□□ -2.2
KNL1-211ENST00000533001 TMED7Q9Y3B3 224 aa1.3□□□□□ -2.2
KNL1-211ENST00000533001 IGKV1-12A0A0C4DH73 117 aa1.3□□□□□ -2.2
KNL1-211ENST00000533001 IGHV1-69-2A0A0G2JMI3 117 aa1.3□□□□□ -2.2
KNL1-211ENST00000533001 F8W735 103 aaPredicted RBP1.3□□□□□ -2.2
KNL1-211ENST00000533001 PGRMC1O00264 195 aaKnown RBP1.3□□□□□ -2.2
KNL1-211ENST00000533001 PIN1P1O15428 100 aa1.3□□□□□ -2.2
KNL1-211ENST00000533001 RIPK2O43353 540 aa1.3□□□□□ -2.2
KNL1-211ENST00000533001 IFNA2P01563 188 aa1.3□□□□□ -2.2
KNL1-211ENST00000533001 IGKV1D-12P01611 117 aa1.3□□□□□ -2.2
KNL1-211ENST00000533001 ANXA4P09525 319 aaPredicted RBP1.3□□□□□ -2.2
KNL1-211ENST00000533001 DRD4P21917 467 aa1.3□□□□□ -2.2
KNL1-211ENST00000533001 CDKN2AP42771 156 aaKnown RBP1.3□□□□□ -2.2
KNL1-211ENST00000533001 BTG1P62324 171 aa1.3□□□□□ -2.2
KNL1-211ENST00000533001 PSPHP78330 225 aa1.3□□□□□ -2.2
KNL1-211ENST00000533001 EGR3Q06889 387 aa1.3□□□□□ -2.2
KNL1-211ENST00000533001 LAPTM5Q13571 262 aa1.3□□□□□ -2.2
KNL1-211ENST00000533001 KLHL22Q53GT1 634 aa1.3□□□□□ -2.2
KNL1-211ENST00000533001 SPIN4Q56A73 249 aa1.3□□□□□ -2.2
KNL1-211ENST00000533001 CCNYL2Q5T2Q4 361 aa1.3□□□□□ -2.2
KNL1-211ENST00000533001 C1orf140Q5VVS0 124 aa1.3□□□□□ -2.2
KNL1-211ENST00000533001 ZYG11AQ6WRX3 759 aa1.3□□□□□ -2.2
KNL1-211ENST00000533001 GALNT5Q7Z7M9 940 aa1.3□□□□□ -2.2
KNL1-211ENST00000533001 SCAIQ8N9R8 606 aa1.3□□□□□ -2.2
KNL1-211ENST00000533001 OR56A1Q8NGH5 318 aa1.3□□□□□ -2.2
KNL1-211ENST00000533001 SLC7A13Q8TCU3 470 aa1.3□□□□□ -2.2
KNL1-211ENST00000533001 GATAD1Q8WUU5 269 aa1.3□□□□□ -2.2
KNL1-211ENST00000533001 RDH5Q92781 318 aa1.3□□□□□ -2.2
KNL1-211ENST00000533001 PTP4A1Q93096 173 aa1.3□□□□□ -2.2
KNL1-211ENST00000533001 MCHR2Q969V1 340 aa1.3□□□□□ -2.2
KNL1-211ENST00000533001 TRMT61AQ96FX7 289 aaKnown RBP1.3□□□□□ -2.2
KNL1-211ENST00000533001 MEGF10Q96KG7 1140 aa1.3□□□□□ -2.2
KNL1-211ENST00000533001 SH3GL3Q99963 347 aa1.3□□□□□ -2.2
KNL1-211ENST00000533001 MRPL57Q9BQC6 102 aaKnown RBP1.3□□□□□ -2.2
KNL1-211ENST00000533001 ELOVL6Q9H5J4 265 aa1.3□□□□□ -2.2
KNL1-211ENST00000533001 METTL7AQ9H8H3 244 aa1.3□□□□□ -2.2
KNL1-211ENST00000533001 SEBOXQ9HB31 216 aaPredicted RBP1.3□□□□□ -2.2
KNL1-211ENST00000533001 REV1Q9UBZ9 1251 aa1.3□□□□□ -2.2
KNL1-211ENST00000533001 VPREB3Q9UKI3 123 aa1.3□□□□□ -2.2
KNL1-211ENST00000533001 PRDM4Q9UKN5 801 aa1.3□□□□□ -2.2
KNL1-211ENST00000533001 FZR1Q9UM11 496 aa1.3□□□□□ -2.2
KNL1-211ENST00000533001 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP1.3□□□□□ -2.22e-6■□□□□ 9.4
KNL1-211ENST00000533001 NPTNQ9Y639 398 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms