RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 SDHBP21912 280 aa13.55□□□□□ -0.24
PCDHA9-202ENST00000532602 ACVR1Q04771 509 aa13.55□□□□□ -0.24
PCDHA9-202ENST00000532602 ALKBH1Q13686 389 aaKnown RBP13.55□□□□□ -0.24
PCDHA9-202ENST00000532602 BRICD5Q6PL45 260 aa13.55□□□□□ -0.24
PCDHA9-202ENST00000532602 PELI3Q8N2H9 469 aa13.55□□□□□ -0.24
PCDHA9-202ENST00000532602 ISL2Q96A47 359 aa13.55□□□□□ -0.24
PCDHA9-202ENST00000532602 ZNF582Q96NG8 517 aaPredicted RBP13.55□□□□□ -0.24
PCDHA9-202ENST00000532602 SLCO5A1Q9H2Y9 848 aa13.55□□□□□ -0.24
PCDHA9-202ENST00000532602 DIMT1Q9UNQ2 313 aaKnown RBP13.55□□□□□ -0.24
PCDHA9-202ENST00000532602 COL4A5P29400 1685 aa13.55□□□□□ -0.24
PCDHA9-202ENST00000532602 P2RY10O00398 339 aa13.55□□□□□ -0.24
PCDHA9-202ENST00000532602 TPPPO94811 219 aa13.55□□□□□ -0.24
PCDHA9-202ENST00000532602 GPR3P46089 330 aa13.55□□□□□ -0.24
PCDHA9-202ENST00000532602 ZNF133P52736 654 aaPredicted RBP13.55□□□□□ -0.24
PCDHA9-202ENST00000532602 FUNDC1Q8IVP5 155 aa13.55□□□□□ -0.24
PCDHA9-202ENST00000532602 FBXL6Q8N531 539 aa13.55□□□□□ -0.24
PCDHA9-202ENST00000532602 OR2I1PQ8NGU4 316 aa13.55□□□□□ -0.24
PCDHA9-202ENST00000532602 PKMYT1Q99640 499 aa13.55□□□□□ -0.24
PCDHA9-202ENST00000532602 OR52A1Q9UKL2 312 aa13.55□□□□□ -0.24
PCDHA9-202ENST00000532602 A6NHS1 94 aa13.54□□□□□ -0.24
PCDHA9-202ENST00000532602 CRYAAP02489 173 aa13.54□□□□□ -0.24
PCDHA9-202ENST00000532602 HOXA1P49639 335 aaPredicted RBP13.54□□□□□ -0.24
PCDHA9-202ENST00000532602 MAP2K6P52564 334 aa13.54□□□□□ -0.24
PCDHA9-202ENST00000532602 OR6V1Q8N148 313 aa13.54□□□□□ -0.24
PCDHA9-202ENST00000532602 OR6M1Q8NGM8 313 aa13.54□□□□□ -0.24
PCDHA9-202ENST00000532602 ABHD6Q9BV23 337 aa13.54□□□□□ -0.24
PCDHA9-202ENST00000532602 EMC6Q9BV81 110 aa13.54□□□□□ -0.24
PCDHA9-202ENST00000532602 KIAA1217Q5T5P2 1943 aa13.54□□□□□ -0.24
PCDHA9-202ENST00000532602 SELENOFO60613 162 aa13.54□□□□□ -0.24
PCDHA9-202ENST00000532602 CT45A6P0DMU7 189 aa13.54□□□□□ -0.24
PCDHA9-202ENST00000532602 CT45A5P0DMU8 189 aa13.54□□□□□ -0.24
PCDHA9-202ENST00000532602 CT45A7P0DMV0 189 aa13.54□□□□□ -0.24
PCDHA9-202ENST00000532602 CT45A8P0DMV1 189 aa13.54□□□□□ -0.24
PCDHA9-202ENST00000532602 CT45A9P0DMV2 189 aa13.54□□□□□ -0.24
PCDHA9-202ENST00000532602 PTPN6P29350 595 aa13.54□□□□□ -0.24
PCDHA9-202ENST00000532602 SCGB2A2Q13296 93 aa13.54□□□□□ -0.24
PCDHA9-202ENST00000532602 CT45A2Q5DJT8 189 aa13.54□□□□□ -0.24
PCDHA9-202ENST00000532602 CT45A1Q5HYN5 189 aa13.54□□□□□ -0.24
PCDHA9-202ENST00000532602 CT45A3Q8NHU0 189 aa13.54□□□□□ -0.24
PCDHA9-202ENST00000532602 HRASLS5Q96KN8 279 aa13.54□□□□□ -0.24
PCDHA9-202ENST00000532602 CHST11Q9NPF2 352 aa13.54□□□□□ -0.24
PCDHA9-202ENST00000532602 RCE1Q9Y256 329 aa13.54□□□□□ -0.24
PCDHA9-202ENST00000532602 F8W036 122 aa13.54□□□□□ -0.24
PCDHA9-202ENST00000532602 MBTPS2O43462 519 aa13.54□□□□□ -0.24
PCDHA9-202ENST00000532602 GIFP27352 417 aa13.54□□□□□ -0.24
PCDHA9-202ENST00000532602 CLDN12P56749 244 aa13.54□□□□□ -0.24
PCDHA9-202ENST00000532602 RBMS2Q15434 407 aaKnown RBP13.54□□□□□ -0.24
PCDHA9-202ENST00000532602 OR52W1Q6IF63 320 aa13.54□□□□□ -0.24
PCDHA9-202ENST00000532602 KCNE4Q8WWG9 221 aa13.54□□□□□ -0.24
PCDHA9-202ENST00000532602 ST8SIA1Q92185 356 aa13.54□□□□□ -0.24
PCDHA9-202ENST00000532602 KIRREL1Q96J84 757 aa13.54□□□□□ -0.24
PCDHA9-202ENST00000532602 C1orf123Q9NWV4 160 aa13.54□□□□□ -0.24
PCDHA9-202ENST00000532602 ZC3H12DA2A288 527 aaKnown RBP13.54□□□□□ -0.24
PCDHA9-202ENST00000532602 ICOSLGO75144 302 aa13.54□□□□□ -0.24
PCDHA9-202ENST00000532602 GM2AP17900 193 aa13.54□□□□□ -0.24
PCDHA9-202ENST00000532602 MTNR1BP49286 362 aa13.54□□□□□ -0.24
PCDHA9-202ENST00000532602 HBG1P69891 147 aa13.54□□□□□ -0.24
PCDHA9-202ENST00000532602 HBG2P69892 147 aa13.54□□□□□ -0.24
PCDHA9-202ENST00000532602 GALEQ14376 348 aa13.54□□□□□ -0.24
PCDHA9-202ENST00000532602 KRBOX4Q5JUW0 171 aa13.54□□□□□ -0.24
PCDHA9-202ENST00000532602 DHRS4L2Q6PKH6 230 aa13.54□□□□□ -0.24
PCDHA9-202ENST00000532602 LILRA2Q8N149 483 aa13.54□□□□□ -0.24
PCDHA9-202ENST00000532602 SECTM1Q8WVN6 248 aa13.54□□□□□ -0.24
PCDHA9-202ENST00000532602 C19orf43Q9BQ61 176 aa13.54□□□□□ -0.24
PCDHA9-202ENST00000532602 HTRA4P83105 476 aaPredicted RBP13.54□□□□□ -0.24
PCDHA9-202ENST00000532602 TMEM92Q6UXU6 159 aa13.54□□□□□ -0.24
PCDHA9-202ENST00000532602 TEX101Q9BY14 249 aa13.54□□□□□ -0.24
PCDHA9-202ENST00000532602 ETV7Q9Y603 341 aa13.54□□□□□ -0.24
PCDHA9-202ENST00000532602 CXorf51AA0A1B0GTR3 108 aa13.53□□□□□ -0.24
PCDHA9-202ENST00000532602 MT-ND4P03905 459 aa13.53□□□□□ -0.24
PCDHA9-202ENST00000532602 COL9A1P20849 921 aa13.53□□□□□ -0.24
PCDHA9-202ENST00000532602 RAB11AP62491 216 aa13.53□□□□□ -0.24
PCDHA9-202ENST00000532602 EIF3IQ13347 325 aaKnown RBP13.53□□□□□ -0.24
PCDHA9-202ENST00000532602 HES1Q14469 280 aa13.53□□□□□ -0.24
PCDHA9-202ENST00000532602 TCTN1Q2MV58 587 aa13.53□□□□□ -0.24
PCDHA9-202ENST00000532602 TMEM215Q68D42 235 aa13.53□□□□□ -0.24
PCDHA9-202ENST00000532602 KCNIP2Q9NS61 270 aa13.53□□□□□ -0.24
PCDHA9-202ENST00000532602 LANCL2Q9NS86 450 aa13.53□□□□□ -0.24
PCDHA9-202ENST00000532602 RGPD4Q7Z3J3 1758 aa13.53□□□□□ -0.24
PCDHA9-202ENST00000532602 E9PI62 339 aa13.53□□□□□ -0.24
PCDHA9-202ENST00000532602 GABARAPH6UMI1 98 aa13.53□□□□□ -0.24
PCDHA9-202ENST00000532602 GABARAPO95166 117 aa13.53□□□□□ -0.24
PCDHA9-202ENST00000532602 PPIAP62937 165 aaKnown RBP13.53□□□□□ -0.24
PCDHA9-202ENST00000532602 FAM53BQ14153 422 aa13.53□□□□□ -0.24
PCDHA9-202ENST00000532602 ARHGAP11BQ3KRB8 267 aa13.53□□□□□ -0.24
PCDHA9-202ENST00000532602 DCXRQ7Z4W1 244 aa13.53□□□□□ -0.24
PCDHA9-202ENST00000532602 DEDD2Q8WXF8 326 aa13.53□□□□□ -0.24
PCDHA9-202ENST00000532602 TRIB1Q96RU8 372 aa13.53□□□□□ -0.24
PCDHA9-202ENST00000532602 PFDN5Q99471 154 aa13.53□□□□□ -0.24
PCDHA9-202ENST00000532602 UBQLN3Q9H347 655 aa13.53□□□□□ -0.24
PCDHA9-202ENST00000532602 LUZP4Q9P127 313 aa13.53□□□□□ -0.24
PCDHA9-202ENST00000532602 LMO7DNF2Z398 122 aa13.53□□□□□ -0.24
PCDHA9-202ENST00000532602 TEAD1P28347 426 aa13.53□□□□□ -0.24
PCDHA9-202ENST00000532602 SMIM15Q7Z3B0 74 aa13.53□□□□□ -0.24
PCDHA9-202ENST00000532602 BEST4Q8NFU0 473 aa13.53□□□□□ -0.24
PCDHA9-202ENST00000532602 TNFRSF12AQ9NP84 129 aa13.53□□□□□ -0.24
PCDHA9-202ENST00000532602 TIMM10BQ9Y5J6 103 aa13.53□□□□□ -0.24
PCDHA9-202ENST00000532602 TMEM82A0PJX8 343 aa13.53□□□□□ -0.24
PCDHA9-202ENST00000532602 LILRA5A6NI73 299 aa13.53□□□□□ -0.24
PCDHA9-202ENST00000532602 I6L893 689 aaPredicted RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms