RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 OR2M2Q96R28 347 aa19.48■□□□□ 0.71
PACSIN3-209ENST00000532457 TUBA1CQ9BQE3 449 aa19.48■□□□□ 0.71
PACSIN3-209ENST00000532457 JAM3Q9BX67 310 aa19.48■□□□□ 0.71
PACSIN3-209ENST00000532457 WDR76Q9H967 626 aa19.48■□□□□ 0.71
PACSIN3-209ENST00000532457 VCX3AQ9NNX9 186 aa19.48■□□□□ 0.71
PACSIN3-209ENST00000532457 ERGIC3Q9Y282 383 aa19.48■□□□□ 0.71
PACSIN3-209ENST00000532457 COA3Q9Y2R0 106 aaPredicted RBP19.48■□□□□ 0.71
PACSIN3-209ENST00000532457 EXOSC1Q9Y3B2 195 aaKnown RBP19.48■□□□□ 0.71
PACSIN3-209ENST00000532457 COL6A6A6NMZ7 2263 aa19.48■□□□□ 0.71
PACSIN3-209ENST00000532457 A0A1W2PQL4 384 aaPredicted RBP19.48■□□□□ 0.71
PACSIN3-209ENST00000532457 ZNF85Q03923 595 aa19.48■□□□□ 0.71
PACSIN3-209ENST00000532457 GPR141Q7Z602 305 aa19.48■□□□□ 0.71
PACSIN3-209ENST00000532457 ACBD7Q8N6N7 88 aa19.48■□□□□ 0.71
PACSIN3-209ENST00000532457 MRPL22Q9NWU5 206 aaKnown RBP19.48■□□□□ 0.71
PACSIN3-209ENST00000532457 COPS3Q9UNS2 423 aa19.48■□□□□ 0.71
PACSIN3-209ENST00000532457 CAMK2AQ9UQM7 478 aa19.48■□□□□ 0.71
PACSIN3-209ENST00000532457 ZNF726A6NNF4 738 aa19.47■□□□□ 0.71
PACSIN3-209ENST00000532457 PSMB9P28065 219 aa19.47■□□□□ 0.71
PACSIN3-209ENST00000532457 PTGS2P35354 604 aa19.47■□□□□ 0.71
PACSIN3-209ENST00000532457 SELENOPP49908 381 aa19.47■□□□□ 0.71
PACSIN3-209ENST00000532457 RASGEF1BQ0VAM2 473 aa19.47■□□□□ 0.71
PACSIN3-209ENST00000532457 SOWAHCQ53LP3 525 aaPredicted RBP19.47■□□□□ 0.71
PACSIN3-209ENST00000532457 KRTCAP3Q53RY4 240 aa19.47■□□□□ 0.71
PACSIN3-209ENST00000532457 TMEM123Q8N131 208 aa19.47■□□□□ 0.71
PACSIN3-209ENST00000532457 CPT1CQ8TCG5 803 aa19.47■□□□□ 0.71
PACSIN3-209ENST00000532457 COG8Q96MW5 612 aa19.47■□□□□ 0.71
PACSIN3-209ENST00000532457 CNN2Q99439 309 aaKnown RBP19.47■□□□□ 0.71
PACSIN3-209ENST00000532457 NAA50Q9GZZ1 169 aaKnown RBP19.47■□□□□ 0.71
PACSIN3-209ENST00000532457 ASF1BQ9NVP2 202 aa19.47■□□□□ 0.71
PACSIN3-209ENST00000532457 A0A1B0GTH9 108 aa19.46■□□□□ 0.71
PACSIN3-209ENST00000532457 MAGEB4O15481 346 aaPredicted RBP19.46■□□□□ 0.71
PACSIN3-209ENST00000532457 IGHG1P01857 330 aa19.46■□□□□ 0.71
PACSIN3-209ENST00000532457 SCG5P05408 212 aa19.46■□□□□ 0.71
PACSIN3-209ENST00000532457 RPS27P42677 84 aaKnown RBP19.46■□□□□ 0.71
PACSIN3-209ENST00000532457 RPS3AP61247 264 aaKnown RBP19.46■□□□□ 0.71
PACSIN3-209ENST00000532457 MED22Q15528 200 aa19.46■□□□□ 0.71
PACSIN3-209ENST00000532457 LCN1P1Q5VSP4 162 aa19.46■□□□□ 0.71
PACSIN3-209ENST00000532457 FGD2Q7Z6J4 655 aa19.46■□□□□ 0.71
PACSIN3-209ENST00000532457 NOXO1Q8NFA2 376 aa19.46■□□□□ 0.71
PACSIN3-209ENST00000532457 RNF128Q8TEB7 428 aa19.46■□□□□ 0.71
PACSIN3-209ENST00000532457 GATAD2BQ8WXI9 593 aa19.46■□□□□ 0.71
PACSIN3-209ENST00000532457 NSMAFQ92636 917 aa19.46■□□□□ 0.71
PACSIN3-209ENST00000532457 MARCH7Q9H992 704 aa19.46■□□□□ 0.71
PACSIN3-209ENST00000532457 ISG20L2Q9H9L3 353 aaKnown RBP19.46■□□□□ 0.71
PACSIN3-209ENST00000532457 B8ZZF3 427 aa19.46■□□□□ 0.71
PACSIN3-209ENST00000532457 AQP7O14520 342 aa19.46■□□□□ 0.71
PACSIN3-209ENST00000532457 AHCYL1O43865 530 aa19.46■□□□□ 0.71
PACSIN3-209ENST00000532457 MYL12AP19105 171 aa19.46■□□□□ 0.71
PACSIN3-209ENST00000532457 CRABP1P29762 137 aa19.46■□□□□ 0.71
PACSIN3-209ENST00000532457 LIPAP38571 399 aa19.46■□□□□ 0.71
PACSIN3-209ENST00000532457 CENPAP49450 140 aa19.46■□□□□ 0.71
PACSIN3-209ENST00000532457 CLRN1P58418 232 aa19.46■□□□□ 0.71
PACSIN3-209ENST00000532457 POU4F2Q12837 409 aa19.46■□□□□ 0.71
PACSIN3-209ENST00000532457 MEP1BQ16820 701 aa19.46■□□□□ 0.71
PACSIN3-209ENST00000532457 ZNF324BQ6AW86 544 aaPredicted RBP19.46■□□□□ 0.71
PACSIN3-209ENST00000532457 SLC35F2Q8IXU6 374 aa19.46■□□□□ 0.71
PACSIN3-209ENST00000532457 POMGNT2Q8NAT1 580 aa19.46■□□□□ 0.71
PACSIN3-209ENST00000532457 MCHR2Q969V1 340 aa19.46■□□□□ 0.71
PACSIN3-209ENST00000532457 ADAD1Q96M93 576 aaKnown RBP19.46■□□□□ 0.71
PACSIN3-209ENST00000532457 RBP7Q96R05 134 aa19.46■□□□□ 0.71
PACSIN3-209ENST00000532457 MND1Q9BWT6 205 aa19.46■□□□□ 0.71
PACSIN3-209ENST00000532457 PHF3Q92576 2039 aaKnown RBP19.45■□□□□ 0.7
PACSIN3-209ENST00000532457 TMEM129A0AVI4 362 aa19.45■□□□□ 0.7
PACSIN3-209ENST00000532457 DAPL1A0PJW8 107 aa19.45■□□□□ 0.7
PACSIN3-209ENST00000532457 PRR32B1ATL7 298 aa19.45■□□□□ 0.7
PACSIN3-209ENST00000532457 TGM6O95932 706 aa19.45■□□□□ 0.7
PACSIN3-209ENST00000532457 SPHARQ15513 63 aa19.45■□□□□ 0.7
PACSIN3-209ENST00000532457 TIGD6Q17RP2 521 aa19.45■□□□□ 0.7
PACSIN3-209ENST00000532457 THEM4Q5T1C6 240 aa19.45■□□□□ 0.7
PACSIN3-209ENST00000532457 GPR107Q5VW38 600 aa19.45■□□□□ 0.7
PACSIN3-209ENST00000532457 SLC25A47Q6Q0C1 308 aa19.45■□□□□ 0.7
PACSIN3-209ENST00000532457 ERI1Q8IV48 349 aaKnown RBP19.45■□□□□ 0.7
PACSIN3-209ENST00000532457 FCGR1BQ92637 280 aa19.45■□□□□ 0.7
PACSIN3-209ENST00000532457 TMEM54Q969K7 222 aa19.45■□□□□ 0.7
PACSIN3-209ENST00000532457 TTTY10Q9BZA0 68 aa19.45■□□□□ 0.7
PACSIN3-209ENST00000532457 PRDM14Q9GZV8 571 aa19.45■□□□□ 0.7
PACSIN3-209ENST00000532457 RACGAP1Q9H0H5 632 aa19.45■□□□□ 0.7
PACSIN3-209ENST00000532457 KLHDC2Q9Y2U9 406 aa19.45■□□□□ 0.7
PACSIN3-209ENST00000532457 SYNGR4O95473 234 aa19.44■□□□□ 0.7
PACSIN3-209ENST00000532457 LALBAP00709 142 aa19.44■□□□□ 0.7
PACSIN3-209ENST00000532457 QDPRP09417 244 aa19.44■□□□□ 0.7
PACSIN3-209ENST00000532457 HSMCR30P0CW71 290 aa19.44■□□□□ 0.7
PACSIN3-209ENST00000532457 EDNRAP25101 427 aa19.44■□□□□ 0.7
PACSIN3-209ENST00000532457 GALEQ14376 348 aa19.44■□□□□ 0.7
PACSIN3-209ENST00000532457 ARMCX4Q5H9R4 360 aa19.44■□□□□ 0.7
PACSIN3-209ENST00000532457 SLC16A9Q7RTY1 509 aa19.44■□□□□ 0.7
PACSIN3-209ENST00000532457 YIPF6Q96EC8 236 aa19.44■□□□□ 0.7
PACSIN3-209ENST00000532457 MGLLQ99685 303 aa19.44■□□□□ 0.7
PACSIN3-209ENST00000532457 CHCHD3Q9NX63 227 aaKnown RBP19.44■□□□□ 0.7
PACSIN3-209ENST00000532457 PAQR5Q9NXK6 330 aaPredicted RBP19.44■□□□□ 0.7
PACSIN3-209ENST00000532457 CFAP46Q8IYW2 2715 aa19.44■□□□□ 0.7
PACSIN3-209ENST00000532457 IGKV3D-15A0A087WSY6 115 aa19.44■□□□□ 0.7
PACSIN3-209ENST00000532457 OR2T7P0C7T2 308 aa19.44■□□□□ 0.7
PACSIN3-209ENST00000532457 PRR30Q53SZ7 412 aaPredicted RBP19.44■□□□□ 0.7
PACSIN3-209ENST00000532457 ZNF367Q7RTV3 350 aa19.44■□□□□ 0.7
PACSIN3-209ENST00000532457 ZSCAN2Q7Z7L9 614 aaPredicted RBP19.44■□□□□ 0.7
PACSIN3-209ENST00000532457 OR2T27Q8NH04 317 aa19.44■□□□□ 0.7
PACSIN3-209ENST00000532457 SPRYD4Q8WW59 207 aaPredicted RBP19.44■□□□□ 0.7
PACSIN3-209ENST00000532457 GPR137Q96N19 417 aa19.44■□□□□ 0.7
PACSIN3-209ENST00000532457 OPALINQ96PE5 141 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms