RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 UTS2O95399 124 aa2.06□□□□□ -2.08
CD44-234ENST00000531873 LY6G6DO95868 133 aa2.06□□□□□ -2.08
CD44-234ENST00000531873 SERPINE2P07093 398 aa2.06□□□□□ -2.08
CD44-234ENST00000531873 ACSM4P0C7M7 580 aa2.06□□□□□ -2.08
CD44-234ENST00000531873 POLR2MP0CAP2 368 aa2.06□□□□□ -2.08
CD44-234ENST00000531873 IGHV3-43DP0DP04 118 aa2.06□□□□□ -2.08
CD44-234ENST00000531873 MYL2P10916 166 aa2.06□□□□□ -2.08
CD44-234ENST00000531873 MGMTP16455 207 aa2.06□□□□□ -2.08
CD44-234ENST00000531873 CPN2P22792 545 aa2.06□□□□□ -2.08
CD44-234ENST00000531873 GABRR1P24046 479 aa2.06□□□□□ -2.08
CD44-234ENST00000531873 CX3CR1P49238 355 aa2.06□□□□□ -2.08
CD44-234ENST00000531873 TAF6P49848 677 aa2.06□□□□□ -2.08
CD44-234ENST00000531873 UGT2B15P54855 530 aa2.06□□□□□ -2.08
CD44-234ENST00000531873 NUP107P57740 925 aa2.06□□□□□ -2.08
CD44-234ENST00000531873 NDPQ00604 133 aa2.06□□□□□ -2.08
CD44-234ENST00000531873 DOC2AQ14183 400 aa2.06□□□□□ -2.08
CD44-234ENST00000531873 ZNF726P1Q15940 193 aa2.06□□□□□ -2.08
CD44-234ENST00000531873 SGCAQ16586 387 aa2.06□□□□□ -2.08
CD44-234ENST00000531873 KRT71Q3SY84 523 aa2.06□□□□□ -2.08
CD44-234ENST00000531873 LRRC10Q5BKY1 277 aa2.06□□□□□ -2.08
CD44-234ENST00000531873 PAGE3Q5JUK9 113 aa2.06□□□□□ -2.08
CD44-234ENST00000531873 OTPQ5XKR4 325 aa2.06□□□□□ -2.08
CD44-234ENST00000531873 TTC19Q6DKK2 380 aaPredicted RBP2.06□□□□□ -2.08
CD44-234ENST00000531873 OR52W1Q6IF63 320 aa2.06□□□□□ -2.08
CD44-234ENST00000531873 CCDC73Q6ZRK6 1079 aa2.06□□□□□ -2.08
CD44-234ENST00000531873 COX15Q7KZN9 410 aa2.06□□□□□ -2.08
CD44-234ENST00000531873 TMEM135Q86UB9 458 aa2.06□□□□□ -2.08
CD44-234ENST00000531873 PRELID2Q8N945 189 aa2.06□□□□□ -2.08
CD44-234ENST00000531873 SUMF2Q8NBJ7 301 aa2.06□□□□□ -2.08
CD44-234ENST00000531873 NPBQ8NG41 125 aa2.06□□□□□ -2.08
CD44-234ENST00000531873 OR4F15Q8NGB8 312 aa2.06□□□□□ -2.08
CD44-234ENST00000531873 ZNF502Q8TBZ5 544 aa2.06□□□□□ -2.08
CD44-234ENST00000531873 DTX3LQ8TDB6 740 aa2.06□□□□□ -2.08
CD44-234ENST00000531873 B3GALT6Q96L58 329 aa2.06□□□□□ -2.08
CD44-234ENST00000531873 MAGEB18Q96M61 343 aa2.06□□□□□ -2.08
CD44-234ENST00000531873 COL21A1Q96P44 957 aa2.06□□□□□ -2.08
CD44-234ENST00000531873 XPO6Q96QU8 1125 aaKnown RBP2.06□□□□□ -2.08
CD44-234ENST00000531873 OR5B12Q96R08 314 aa2.06□□□□□ -2.08
CD44-234ENST00000531873 RASL11BQ9BPW5 248 aa2.06□□□□□ -2.08
CD44-234ENST00000531873 NRIP2Q9BQI9 281 aa2.06□□□□□ -2.08
CD44-234ENST00000531873 SLC7A5P2Q9GIP4 190 aa2.06□□□□□ -2.08
CD44-234ENST00000531873 C8orf33Q9H7E9 229 aaPredicted RBP2.06□□□□□ -2.08
CD44-234ENST00000531873 NTN4Q9HB63 628 aa2.06□□□□□ -2.08
CD44-234ENST00000531873 RETNQ9HD89 108 aa2.06□□□□□ -2.08
CD44-234ENST00000531873 CCNB1IP1Q9NPC3 277 aa2.06□□□□□ -2.08
CD44-234ENST00000531873 MMP26Q9NRE1 261 aa2.06□□□□□ -2.08
CD44-234ENST00000531873 MRPL22Q9NWU5 206 aaKnown RBP2.06□□□□□ -2.08
CD44-234ENST00000531873 HRASLS2Q9NWW9 162 aa2.06□□□□□ -2.08
CD44-234ENST00000531873 IL17CQ9P0M4 197 aa2.06□□□□□ -2.08
CD44-234ENST00000531873 PEF1Q9UBV8 284 aaKnown RBP2.06□□□□□ -2.08
CD44-234ENST00000531873 GNPTGQ9UJJ9 305 aa2.06□□□□□ -2.08
CD44-234ENST00000531873 RHBDD3Q9Y3P4 386 aa2.06□□□□□ -2.08
CD44-234ENST00000531873 F11RQ9Y624 299 aaKnown RBP2.06□□□□□ -2.08
CD44-234ENST00000531873 AKNAQ7Z591 1439 aa2.06□□□□□ -2.08
CD44-234ENST00000531873 ERCC6L2Q5T890 1561 aa2.06□□□□□ -2.08
CD44-234ENST00000531873 C2orf16Q68DN1 1984 aa2.05□□□□□ -2.08
CD44-234ENST00000531873 ARPC4-TTLL3A0A0A6YYG9 625 aa2.05□□□□□ -2.08
CD44-234ENST00000531873 ZNF816-ZNF321PA0A0X1KG74 233 aa2.05□□□□□ -2.08
CD44-234ENST00000531873 GABRR3A8MPY1 467 aa2.05□□□□□ -2.08
CD44-234ENST00000531873 K7EMT4 169 aa2.05□□□□□ -2.08
CD44-234ENST00000531873 DYNC1I1O14576 645 aa2.05□□□□□ -2.08
CD44-234ENST00000531873 SCAMP2O15127 329 aaKnown RBP2.05□□□□□ -2.08
CD44-234ENST00000531873 SIVA1O15304 175 aa2.05□□□□□ -2.08
CD44-234ENST00000531873 SLC31A2O15432 143 aa2.05□□□□□ -2.08
CD44-234ENST00000531873 DPM1O60762 260 aa2.05□□□□□ -2.08
CD44-234ENST00000531873 AIFM1O95831 613 aa2.05□□□□□ -2.08
CD44-234ENST00000531873 C6orf47O95873 294 aa2.05□□□□□ -2.08
CD44-234ENST00000531873 IGKV3-15P01624 115 aa2.05□□□□□ -2.08
CD44-234ENST00000531873 HPNP05981 417 aa2.05□□□□□ -2.08
CD44-234ENST00000531873 CSF3P09919 207 aa2.05□□□□□ -2.08
CD44-234ENST00000531873 TDGF1P13385 188 aa2.05□□□□□ -2.08
CD44-234ENST00000531873 ZNF19P17023 458 aa2.05□□□□□ -2.08
CD44-234ENST00000531873 HMOX2P30519 316 aa2.05□□□□□ -2.08
CD44-234ENST00000531873 SERPINB5P36952 375 aa2.05□□□□□ -2.08
CD44-234ENST00000531873 CCR8P51685 355 aa2.05□□□□□ -2.08
CD44-234ENST00000531873 TDGF1P3P51864 188 aa2.05□□□□□ -2.08
CD44-234ENST00000531873 NCBP2P52298 156 aaKnown RBP eCLIP2.05□□□□□ -2.08
CD44-234ENST00000531873 DAOAP59103 153 aa2.05□□□□□ -2.08
CD44-234ENST00000531873 RAB11AP62491 216 aa2.05□□□□□ -2.08
CD44-234ENST00000531873 RPS21P63220 83 aaKnown RBP2.05□□□□□ -2.08
CD44-234ENST00000531873 ADARB1P78563 741 aaKnown RBP2.05□□□□□ -2.08
CD44-234ENST00000531873 MXD1Q05195 221 aa2.05□□□□□ -2.08
CD44-234ENST00000531873 AQP6Q13520 282 aa2.05□□□□□ -2.08
CD44-234ENST00000531873 RAB11BQ15907 218 aa2.05□□□□□ -2.08
CD44-234ENST00000531873 KLHL40Q2TBA0 621 aa2.05□□□□□ -2.08
CD44-234ENST00000531873 XKR4Q5GH76 650 aa2.05□□□□□ -2.08
CD44-234ENST00000531873 LCE3CQ5T5A8 94 aa2.05□□□□□ -2.08
CD44-234ENST00000531873 PLCXD3Q63HM9 321 aa2.05□□□□□ -2.08
CD44-234ENST00000531873 C6orf89Q6UWU4 347 aa2.05□□□□□ -2.08
CD44-234ENST00000531873 MBOAT1Q6ZNC8 495 aa2.05□□□□□ -2.08
CD44-234ENST00000531873 LINC00173Q6ZV60 143 aa2.05□□□□□ -2.08
CD44-234ENST00000531873 C8orf31Q8N9H6 132 aa2.05□□□□□ -2.08
CD44-234ENST00000531873 FAM184AQ8NB25 1140 aa2.05□□□□□ -2.08
CD44-234ENST00000531873 OR56A4Q8NGH8 313 aa2.05□□□□□ -2.08
CD44-234ENST00000531873 OR52K1Q8NGK4 314 aa2.05□□□□□ -2.08
CD44-234ENST00000531873 OR2G3Q8NGZ4 309 aa2.05□□□□□ -2.08
CD44-234ENST00000531873 OR5K2Q8NHB8 316 aa2.05□□□□□ -2.08
CD44-234ENST00000531873 LYPD6BQ8NI32 183 aa2.05□□□□□ -2.08
CD44-234ENST00000531873 NUBPLQ8TB37 319 aa2.05□□□□□ -2.08
CD44-234ENST00000531873 ACER1Q8TDN7 264 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms