RNA–Protein interactions for RNA: ENST00000531872.5

NXF1-212, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 390 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-212ENST00000531872 IPCEF1Q8WWN9 437 aaPredicted RBP6.54□□□□□ -1.36
NXF1-212ENST00000531872 GEMIN6Q8WXD5 167 aaKnown RBP6.54□□□□□ -1.36
NXF1-212ENST00000531872 MARS2Q96GW9 593 aaKnown RBP6.54□□□□□ -1.36
NXF1-212ENST00000531872 SIGLEC11Q96RL6 698 aa6.54□□□□□ -1.36
NXF1-212ENST00000531872 DCLRE1CQ96SD1 692 aaKnown RBP6.54□□□□□ -1.36
NXF1-212ENST00000531872 SH3GL3Q99963 347 aa6.54□□□□□ -1.36
NXF1-212ENST00000531872 LRMDAQ9H2I8 198 aa6.54□□□□□ -1.36
NXF1-212ENST00000531872 ARMC7Q9H6L4 198 aa6.54□□□□□ -1.36
NXF1-212ENST00000531872 AKTIPQ9H8T0 292 aa6.54□□□□□ -1.36
NXF1-212ENST00000531872 MARCH7Q9H992 704 aa6.54□□□□□ -1.36
NXF1-212ENST00000531872 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.54□□□□□ -1.36
NXF1-212ENST00000531872 CYSLTR2Q9NS75 346 aa6.54□□□□□ -1.36
NXF1-212ENST00000531872 TMEM106BQ9NUM4 274 aa6.54□□□□□ -1.36
NXF1-212ENST00000531872 TMEM38BQ9NVV0 291 aa6.54□□□□□ -1.36
NXF1-212ENST00000531872 MRPL39Q9NYK5 338 aaKnown RBP6.54□□□□□ -1.36
NXF1-212ENST00000531872 GLTPQ9NZD2 209 aa6.54□□□□□ -1.36
NXF1-212ENST00000531872 CALML5Q9NZT1 146 aa6.54□□□□□ -1.36
NXF1-212ENST00000531872 ASH2LQ9UBL3 628 aa6.54□□□□□ -1.36
NXF1-212ENST00000531872 P2RX2Q9UBL9 471 aa6.54□□□□□ -1.36
NXF1-212ENST00000531872 OR5V1Q9UGF6 321 aa6.54□□□□□ -1.36
NXF1-212ENST00000531872 ZDHHC8Q9ULC8 765 aa6.54□□□□□ -1.36
NXF1-212ENST00000531872 ZNF232Q9UNY5 417 aa6.54□□□□□ -1.36
NXF1-212ENST00000531872 LRCH1Q9Y2L9 728 aa6.54□□□□□ -1.36
NXF1-212ENST00000531872 IGHV2-70DA0A0C4DH43 119 aa6.53□□□□□ -1.36
NXF1-212ENST00000531872 A0A0G2JPF8 293 aa6.53□□□□□ -1.36
NXF1-212ENST00000531872 IQCMA0A1B0GVH7 501 aa6.53□□□□□ -1.36
NXF1-212ENST00000531872 A0A1B0GWA3 101 aa6.53□□□□□ -1.36
NXF1-212ENST00000531872 PLSCR5A0PG75 271 aa6.53□□□□□ -1.36
NXF1-212ENST00000531872 HNRNPCL2B2RXH8 293 aa6.53□□□□□ -1.36
NXF1-212ENST00000531872 HNRNPCL3B7ZW38 293 aa6.53□□□□□ -1.36
NXF1-212ENST00000531872 E9PBE3 544 aa6.53□□□□□ -1.36
NXF1-212ENST00000531872 PLPP3O14495 311 aa6.53□□□□□ -1.36
NXF1-212ENST00000531872 DHHO43323 396 aa6.53□□□□□ -1.36
NXF1-212ENST00000531872 HNRNPCL1O60812 293 aaKnown RBP6.53□□□□□ -1.36
NXF1-212ENST00000531872 FARS2O95363 451 aaKnown RBP6.53□□□□□ -1.36
NXF1-212ENST00000531872 BCHEP06276 602 aa6.53□□□□□ -1.36
NXF1-212ENST00000531872 MELTFP08582 738 aa6.53□□□□□ -1.36
NXF1-212ENST00000531872 MMP7P09237 267 aaPredicted RBP6.53□□□□□ -1.36
NXF1-212ENST00000531872 WNT2P09544 360 aa6.53□□□□□ -1.36
NXF1-212ENST00000531872 HNRNPCL4P0DMR1 293 aa6.53□□□□□ -1.36
NXF1-212ENST00000531872 CPT2P23786 658 aa6.53□□□□□ -1.36
NXF1-212ENST00000531872 S100A3P33764 101 aa6.53□□□□□ -1.36
NXF1-212ENST00000531872 RBMXP38159 391 aaKnown RBP6.53□□□□□ -1.36
NXF1-212ENST00000531872 WNT5AP41221 380 aa6.53□□□□□ -1.36
NXF1-212ENST00000531872 CLNS1AP54105 237 aaKnown RBP6.53□□□□□ -1.36
NXF1-212ENST00000531872 BPIFB3P59826 476 aa6.53□□□□□ -1.36
NXF1-212ENST00000531872 BTG1P62324 171 aa6.53□□□□□ -1.36
NXF1-212ENST00000531872 ZMYND11Q15326 602 aa6.53□□□□□ -1.36
NXF1-212ENST00000531872 C2orf68Q2NKX9 166 aa6.53□□□□□ -1.36
NXF1-212ENST00000531872 SLC36A2Q495M3 483 aa6.53□□□□□ -1.36
NXF1-212ENST00000531872 NRN1LQ496H8 165 aa6.53□□□□□ -1.36
NXF1-212ENST00000531872 THEM4Q5T1C6 240 aa6.53□□□□□ -1.36
NXF1-212ENST00000531872 ZNF774Q6NX45 483 aa6.53□□□□□ -1.36
NXF1-212ENST00000531872 BTNL3Q6UXE8 466 aa6.53□□□□□ -1.36
NXF1-212ENST00000531872 BRD3OSQ6XYD6 125 aa6.53□□□□□ -1.36
NXF1-212ENST00000531872 ZNF620Q6ZNG0 422 aa6.53□□□□□ -1.36
NXF1-212ENST00000531872 ZNF621Q6ZSS3 439 aa6.53□□□□□ -1.36
NXF1-212ENST00000531872 SLC16A14Q7RTX9 510 aa6.53□□□□□ -1.36
NXF1-212ENST00000531872 ZNF101Q8IZC7 436 aa6.53□□□□□ -1.36
NXF1-212ENST00000531872 OR6X1Q8NH79 312 aa6.53□□□□□ -1.36
NXF1-212ENST00000531872 KLF14Q8TD94 323 aaPredicted RBP6.53□□□□□ -1.36
NXF1-212ENST00000531872 SLC38A5Q8WUX1 472 aa6.53□□□□□ -1.36
NXF1-212ENST00000531872 RAB40AQ8WXH6 277 aa6.53□□□□□ -1.36
NXF1-212ENST00000531872 TMEM19Q96HH6 336 aa6.53□□□□□ -1.36
NXF1-212ENST00000531872 SAMD8Q96LT4 415 aa6.53□□□□□ -1.36
NXF1-212ENST00000531872 PANX1Q96RD7 426 aa6.53□□□□□ -1.36
NXF1-212ENST00000531872 SLC30A2Q9BRI3 323 aa6.53□□□□□ -1.36
NXF1-212ENST00000531872 ASPNQ9BXN1 380 aa6.53□□□□□ -1.36
NXF1-212ENST00000531872 RNF121Q9H920 327 aa6.53□□□□□ -1.36
NXF1-212ENST00000531872 TCF7L1Q9HCS4 588 aa6.53□□□□□ -1.36
NXF1-212ENST00000531872 TNFRSF19Q9NS68 423 aa6.53□□□□□ -1.36
NXF1-212ENST00000531872 MKS1Q9NXB0 559 aa6.53□□□□□ -1.36
NXF1-212ENST00000531872 CGGBP1Q9UFW8 167 aaPredicted RBP6.53□□□□□ -1.36
NXF1-212ENST00000531872 IFT52Q9Y366 437 aa6.53□□□□□ -1.36
NXF1-212ENST00000531872 POMT1Q9Y6A1 747 aa6.53□□□□□ -1.36
NXF1-212ENST00000531872 DYNC2H1Q8NCM8 4307 aaKnown RBP6.53□□□□□ -1.36
NXF1-212ENST00000531872 SACSQ9NZJ4 4579 aa6.52□□□□□ -1.37
NXF1-212ENST00000531872 TENM3Q9P273 2699 aa6.52□□□□□ -1.37
NXF1-212ENST00000531872 BIRC6Q9NR09 4857 aa6.52□□□□□ -1.37
NXF1-212ENST00000531872 KIR2DS1A0A191URI9 304 aa6.52□□□□□ -1.37
NXF1-212ENST00000531872 CEACAM18A8MTB9 384 aa6.52□□□□□ -1.37
NXF1-212ENST00000531872 LRRN3E7EW58 273 aa6.52□□□□□ -1.37
NXF1-212ENST00000531872 H3BSA7 217 aa6.52□□□□□ -1.37
NXF1-212ENST00000531872 TGDSO95455 350 aa6.52□□□□□ -1.37
NXF1-212ENST00000531872 KRT75O95678 551 aa6.52□□□□□ -1.37
NXF1-212ENST00000531872 PRB2P02812 416 aaPredicted RBP6.52□□□□□ -1.37
NXF1-212ENST00000531872 SHBGP04278 402 aa6.52□□□□□ -1.37
NXF1-212ENST00000531872 FAM153BP0C7A2 387 aa6.52□□□□□ -1.37
NXF1-212ENST00000531872 MYZAPP0CAP1 466 aa6.52□□□□□ -1.37
NXF1-212ENST00000531872 ETFAP13804 333 aa6.52□□□□□ -1.37
NXF1-212ENST00000531872 HTR2AP28223 471 aa6.52□□□□□ -1.37
NXF1-212ENST00000531872 APLNRP35414 380 aa6.52□□□□□ -1.37
NXF1-212ENST00000531872 MDH2P40926 338 aaKnown RBP6.52□□□□□ -1.37
NXF1-212ENST00000531872 BIDP55957 195 aa6.52□□□□□ -1.37
NXF1-212ENST00000531872 TNFAIP6P98066 277 aaPredicted RBP6.52□□□□□ -1.37
NXF1-212ENST00000531872 PLP2Q04941 152 aa6.52□□□□□ -1.37
NXF1-212ENST00000531872 LRRC74AQ0VAA2 488 aa6.52□□□□□ -1.37
NXF1-212ENST00000531872 CDK5R2Q13319 367 aa6.52□□□□□ -1.37
NXF1-212ENST00000531872 PDCD4Q53EL6 469 aaKnown RBP6.52□□□□□ -1.37
NXF1-212ENST00000531872 ALG10BQ5I7T1 473 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms