RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 SLC38A2Q96QD8 506 aa14.88□□□□□ -0.03
SF3B2-211ENST00000531041 USB1Q9BQ65 265 aaKnown RBP14.88□□□□□ -0.03
SF3B2-211ENST00000531041 OR10A4Q9H209 315 aa14.88□□□□□ -0.03
SF3B2-211ENST00000531041 IGKV1D-43A0A0B4J1Z2 117 aa14.87□□□□□ -0.03
SF3B2-211ENST00000531041 CIB4A0PJX0 185 aa14.87□□□□□ -0.03
SF3B2-211ENST00000531041 GRNP28799 593 aaKnown RBP14.87□□□□□ -0.03
SF3B2-211ENST00000531041 CRABP1P29762 137 aa14.87□□□□□ -0.03
SF3B2-211ENST00000531041 PTDSS1P48651 473 aaKnown RBP14.87□□□□□ -0.03
SF3B2-211ENST00000531041 ZNF84P51523 738 aa14.87□□□□□ -0.03
SF3B2-211ENST00000531041 CRMP1Q14194 572 aa14.87□□□□□ -0.03
SF3B2-211ENST00000531041 GABRA6Q16445 453 aa14.87□□□□□ -0.03
SF3B2-211ENST00000531041 SNAPC1Q16533 368 aa14.87□□□□□ -0.03
SF3B2-211ENST00000531041 C9orf135Q5VTT2 229 aa14.87□□□□□ -0.03
SF3B2-211ENST00000531041 OR7E24Q6IFN5 339 aa14.87□□□□□ -0.03
SF3B2-211ENST00000531041 BHLHA15Q7RTS1 189 aaPredicted RBP14.87□□□□□ -0.03
SF3B2-211ENST00000531041 CYB561A3Q8NBI2 242 aa14.87□□□□□ -0.03
SF3B2-211ENST00000531041 STEAP2Q8NFT2 490 aa14.87□□□□□ -0.03
SF3B2-211ENST00000531041 NUAK2Q9H093 628 aa14.87□□□□□ -0.03
SF3B2-211ENST00000531041 VCX3BQ9H321 246 aa14.87□□□□□ -0.03
SF3B2-211ENST00000531041 NPDC1Q9NQX5 325 aaPredicted RBP14.87□□□□□ -0.03
SF3B2-211ENST00000531041 TVP23BQ9NYZ1 205 aa14.87□□□□□ -0.03
SF3B2-211ENST00000531041 FKBP7Q9Y680 259 aa14.87□□□□□ -0.03
SF3B2-211ENST00000531041 H0YJX3 145 aa14.86□□□□□ -0.03
SF3B2-211ENST00000531041 DCTN6O00399 190 aa14.86□□□□□ -0.03
SF3B2-211ENST00000531041 SLC16A6O15403 523 aa14.86□□□□□ -0.03
SF3B2-211ENST00000531041 SLC16A7O60669 478 aa14.86□□□□□ -0.03
SF3B2-211ENST00000531041 CTLA4P16410 223 aa14.86□□□□□ -0.03
SF3B2-211ENST00000531041 CCKARP32238 428 aa14.86□□□□□ -0.03
SF3B2-211ENST00000531041 ARF1P84077 181 aaKnown RBP14.86□□□□□ -0.03
SF3B2-211ENST00000531041 EFNB1P98172 346 aa14.86□□□□□ -0.03
SF3B2-211ENST00000531041 TSC22D1Q15714 1073 aa14.86□□□□□ -0.03
SF3B2-211ENST00000531041 NRN1LQ496H8 165 aa14.86□□□□□ -0.03
SF3B2-211ENST00000531041 ANKRD16Q6P6B7 361 aa14.86□□□□□ -0.03
SF3B2-211ENST00000531041 DNM1P34Q6PK57 102 aa14.86□□□□□ -0.03
SF3B2-211ENST00000531041 ZBTB46Q86UZ6 589 aa14.86□□□□□ -0.03
SF3B2-211ENST00000531041 OR6V1Q8N148 313 aa14.86□□□□□ -0.03
SF3B2-211ENST00000531041 OR1K1Q8NGR3 316 aa14.86□□□□□ -0.03
SF3B2-211ENST00000531041 NSMAFQ92636 917 aa14.86□□□□□ -0.03
SF3B2-211ENST00000531041 PLEKHA8Q96JA3 519 aa14.86□□□□□ -0.03
SF3B2-211ENST00000531041 PITX2Q99697 317 aa14.86□□□□□ -0.03
SF3B2-211ENST00000531041 FOXB1Q99853 325 aa14.86□□□□□ -0.03
SF3B2-211ENST00000531041 NMNAT2Q9BZQ4 307 aa14.86□□□□□ -0.03
SF3B2-211ENST00000531041 FN3KQ9H479 309 aa14.86□□□□□ -0.03
SF3B2-211ENST00000531041 RPRD1BQ9NQG5 326 aaKnown RBP14.86□□□□□ -0.03
SF3B2-211ENST00000531041 FAM118AQ9NWS6 357 aa14.86□□□□□ -0.03
SF3B2-211ENST00000531041 NDRG4Q9ULP0 352 aaKnown RBP14.86□□□□□ -0.03
SF3B2-211ENST00000531041 UGT2A1Q9Y4X1 527 aa14.86□□□□□ -0.03
SF3B2-211ENST00000531041 PRR14LQ5THK1 2151 aa14.86□□□□□ -0.03
SF3B2-211ENST00000531041 ADGRG4Q8IZF6 3080 aa14.86□□□□□ -0.03
SF3B2-211ENST00000531041 DOPEY2Q9Y3R5 2298 aa14.86□□□□□ -0.03
SF3B2-211ENST00000531041 ICE1Q9Y2F5 2266 aa14.85□□□□□ -0.03
SF3B2-211ENST00000531041 LOC100130705A0A1B0GUX0 176 aa14.85□□□□□ -0.03
SF3B2-211ENST00000531041 KHDRBS3O75525 346 aaKnown RBP14.85□□□□□ -0.03
SF3B2-211ENST00000531041 RAD51DO75771 328 aa14.85□□□□□ -0.03
SF3B2-211ENST00000531041 PAICSP22234 425 aaKnown RBP14.85□□□□□ -0.03
SF3B2-211ENST00000531041 IL32P24001 234 aa14.85□□□□□ -0.03
SF3B2-211ENST00000531041 GGT2P36268 569 aa14.85□□□□□ -0.03
SF3B2-211ENST00000531041 PEX19P40855 299 aa14.85□□□□□ -0.03
SF3B2-211ENST00000531041 SLC25A1P53007 311 aa14.85□□□□□ -0.03
SF3B2-211ENST00000531041 ETFDHQ16134 617 aa14.85□□□□□ -0.03
SF3B2-211ENST00000531041 FBXW10Q5XX13 1052 aa14.85□□□□□ -0.03
SF3B2-211ENST00000531041 FOXL2NBQ6ZUU3 175 aa14.85□□□□□ -0.03
SF3B2-211ENST00000531041 P2RY8Q86VZ1 359 aa14.85□□□□□ -0.03
SF3B2-211ENST00000531041 C17orf78Q8N4C9 275 aa14.85□□□□□ -0.03
SF3B2-211ENST00000531041 BCL2L2Q92843 193 aaPredicted RBP14.85□□□□□ -0.03
SF3B2-211ENST00000531041 TSSK2Q96PF2 358 aa14.85□□□□□ -0.03
SF3B2-211ENST00000531041 RACGAP1Q9H0H5 632 aa14.85□□□□□ -0.03
SF3B2-211ENST00000531041 NELFAQ9H3P2 528 aa14.85□□□□□ -0.03
SF3B2-211ENST00000531041 SRA1Q9HD15 236 aaKnown RBP14.85□□□□□ -0.03
SF3B2-211ENST00000531041 TMEM38BQ9NVV0 291 aa14.85□□□□□ -0.03
SF3B2-211ENST00000531041 B9D1Q9UPM9 204 aa14.85□□□□□ -0.03
SF3B2-211ENST00000531041 UTP20O75691 2785 aaKnown RBP14.84□□□□□ -0.03
SF3B2-211ENST00000531041 IGLV1-36A0A0B4J1U3 117 aa14.84□□□□□ -0.03
SF3B2-211ENST00000531041 OR5H1A6NKK0 313 aa14.84□□□□□ -0.03
SF3B2-211ENST00000531041 PRR23D1E9PI22 279 aaPredicted RBP14.84□□□□□ -0.03
SF3B2-211ENST00000531041 CLDN1O95832 211 aa14.84□□□□□ -0.03
SF3B2-211ENST00000531041 PRR23D2P0DMB1 279 aaPredicted RBP14.84□□□□□ -0.03
SF3B2-211ENST00000531041 HOXB1P14653 301 aaPredicted RBP14.84□□□□□ -0.03
SF3B2-211ENST00000531041 PPP3CBP16298 524 aa14.84□□□□□ -0.03
SF3B2-211ENST00000531041 CDC42P60953 191 aa14.84□□□□□ -0.03
SF3B2-211ENST00000531041 MRPS34P82930 218 aaKnown RBP14.84□□□□□ -0.03
SF3B2-211ENST00000531041 C1QTNF12Q5T7M4 302 aa14.84□□□□□ -0.03
SF3B2-211ENST00000531041 ZNF813Q6ZN06 617 aa14.84□□□□□ -0.03
SF3B2-211ENST00000531041 ZNF555Q8NEP9 628 aa14.84□□□□□ -0.03
SF3B2-211ENST00000531041 OR2T4Q8NH00 348 aa14.84□□□□□ -0.03
SF3B2-211ENST00000531041 PTP4A1Q93096 173 aa14.84□□□□□ -0.03
SF3B2-211ENST00000531041 S100PBPQ96BU1 408 aa14.84□□□□□ -0.03
SF3B2-211ENST00000531041 ACTR6Q9GZN1 396 aa14.84□□□□□ -0.03
SF3B2-211ENST00000531041 HEATR1Q9H583 2144 aaKnown RBP14.84□□□□□ -0.03
SF3B2-211ENST00000531041 RERGLQ9H628 205 aa14.84□□□□□ -0.03
SF3B2-211ENST00000531041 HINT3Q9NQE9 182 aaKnown RBP14.84□□□□□ -0.03
SF3B2-211ENST00000531041 FAM183AA6NL82 134 aa14.83□□□□□ -0.03
SF3B2-211ENST00000531041 C19orf84I3L1E1 186 aa14.83□□□□□ -0.03
SF3B2-211ENST00000531041 PRKYO43930 277 aa14.83□□□□□ -0.03
SF3B2-211ENST00000531041 SEC14L2O76054 403 aa14.83□□□□□ -0.03
SF3B2-211ENST00000531041 OR8G3PP0DMU2 310 aa14.83□□□□□ -0.03
SF3B2-211ENST00000531041 IGFBP2P18065 325 aa14.83□□□□□ -0.03
SF3B2-211ENST00000531041 NPR2P20594 1047 aa14.83□□□□□ -0.03
SF3B2-211ENST00000531041 GUCA1AP43080 201 aaPredicted RBP14.83□□□□□ -0.03
SF3B2-211ENST00000531041 KEAP1Q14145 624 aa14.83□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms