RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 AP4B1Q9Y6B7 739 aa4.45□□□□□ -1.7
AMBRA1-209ENST00000529963 USF3Q68DE3 2245 aa4.45□□□□□ -1.7
AMBRA1-209ENST00000529963 DSCAMO60469 2012 aa4.44□□□□□ -1.7
AMBRA1-209ENST00000529963 HTR3EA5X5Y0 456 aa4.44□□□□□ -1.7
AMBRA1-209ENST00000529963 C17orf51A8MQB3 221 aa4.44□□□□□ -1.7
AMBRA1-209ENST00000529963 H0YC42 278 aa4.44□□□□□ -1.7
AMBRA1-209ENST00000529963 HS3ST1O14792 307 aa4.44□□□□□ -1.7
AMBRA1-209ENST00000529963 FADS1O60427 444 aa4.44□□□□□ -1.7
AMBRA1-209ENST00000529963 NME6O75414 186 aaPredicted RBP4.44□□□□□ -1.7
AMBRA1-209ENST00000529963 AQP8O94778 261 aa4.44□□□□□ -1.7
AMBRA1-209ENST00000529963 SUPT7LO94864 414 aa4.44□□□□□ -1.7
AMBRA1-209ENST00000529963 OR4F21O95013 312 aa4.44□□□□□ -1.7
AMBRA1-209ENST00000529963 SYNGR4O95473 234 aa4.44□□□□□ -1.7
AMBRA1-209ENST00000529963 LINGO3P0C6S8 592 aa4.44□□□□□ -1.7
AMBRA1-209ENST00000529963 ZNF17P17021 662 aa4.44□□□□□ -1.7
AMBRA1-209ENST00000529963 TSPAN8P19075 237 aa4.44□□□□□ -1.7
AMBRA1-209ENST00000529963 LOXP28300 417 aaPredicted RBP4.44□□□□□ -1.7
AMBRA1-209ENST00000529963 HMOX2P30519 316 aa4.44□□□□□ -1.7
AMBRA1-209ENST00000529963 NTSP30990 170 aa4.44□□□□□ -1.7
AMBRA1-209ENST00000529963 CASQ1P31415 396 aa4.44□□□□□ -1.7
AMBRA1-209ENST00000529963 TIA1P31483 386 aaKnown RBP eCLIP4.44□□□□□ -1.7
AMBRA1-209ENST00000529963 HSD17B3P37058 310 aa4.44□□□□□ -1.7
AMBRA1-209ENST00000529963 MAGEA12P43365 314 aa4.44□□□□□ -1.7
AMBRA1-209ENST00000529963 NCBP2P52298 156 aaKnown RBP eCLIP4.44□□□□□ -1.7
AMBRA1-209ENST00000529963 SUCLG1P53597 346 aaKnown RBP4.44□□□□□ -1.7
AMBRA1-209ENST00000529963 TPD52P55327 224 aaPredicted RBP4.44□□□□□ -1.7
AMBRA1-209ENST00000529963 ATP5J2P56134 94 aa4.44□□□□□ -1.7
AMBRA1-209ENST00000529963 CTBP2P56545 445 aa4.44□□□□□ -1.7
AMBRA1-209ENST00000529963 CLDN15P56746 228 aa4.44□□□□□ -1.7
AMBRA1-209ENST00000529963 MAD2L1Q13257 205 aaPredicted RBP4.44□□□□□ -1.7
AMBRA1-209ENST00000529963 GUSBP1Q15486 140 aa4.44□□□□□ -1.7
AMBRA1-209ENST00000529963 TRADDQ15628 312 aa4.44□□□□□ -1.7
AMBRA1-209ENST00000529963 MEP1BQ16820 701 aa4.44□□□□□ -1.7
AMBRA1-209ENST00000529963 C2orf76Q3KRA6 126 aa4.44□□□□□ -1.7
AMBRA1-209ENST00000529963 TEX35Q5T0J7 233 aa4.44□□□□□ -1.7
AMBRA1-209ENST00000529963 LGSNQ5TDP6 509 aa4.44□□□□□ -1.7
AMBRA1-209ENST00000529963 C8orf74Q6P047 294 aa4.44□□□□□ -1.7
AMBRA1-209ENST00000529963 GPRIN3Q6ZVF9 776 aa4.44□□□□□ -1.7
AMBRA1-209ENST00000529963 RPS27LQ71UM5 84 aaKnown RBP4.44□□□□□ -1.7
AMBRA1-209ENST00000529963 SPATA19Q7Z5L4 167 aa4.44□□□□□ -1.7
AMBRA1-209ENST00000529963 CCDC190Q86UF4 302 aa4.44□□□□□ -1.7
AMBRA1-209ENST00000529963 OR7G2Q8NG99 324 aa4.44□□□□□ -1.7
AMBRA1-209ENST00000529963 OR5M1Q8NGP8 315 aa4.44□□□□□ -1.7
AMBRA1-209ENST00000529963 OR6K3Q8NGY3 331 aa4.44□□□□□ -1.7
AMBRA1-209ENST00000529963 CDC26Q8NHZ8 85 aa4.44□□□□□ -1.7
AMBRA1-209ENST00000529963 C16orf78Q8WTQ4 265 aa4.44□□□□□ -1.7
AMBRA1-209ENST00000529963 SLC38A5Q8WUX1 472 aa4.44□□□□□ -1.7
AMBRA1-209ENST00000529963 GMPPAQ96IJ6 420 aaPredicted RBP4.44□□□□□ -1.7
AMBRA1-209ENST00000529963 ZNF382Q96SR6 550 aa4.44□□□□□ -1.7
AMBRA1-209ENST00000529963 ACPTQ9BZG2 426 aa4.44□□□□□ -1.7
AMBRA1-209ENST00000529963 TBL1XR1Q9BZK7 514 aa4.44□□□□□ -1.7
AMBRA1-209ENST00000529963 TSPYL1Q9H0U9 437 aa4.44□□□□□ -1.7
AMBRA1-209ENST00000529963 C3orf14Q9HBI5 128 aa4.44□□□□□ -1.7
AMBRA1-209ENST00000529963 MIEF1Q9NQG6 463 aa4.44□□□□□ -1.7
AMBRA1-209ENST00000529963 ZNF701Q9NV72 531 aaPredicted RBP4.44□□□□□ -1.7
AMBRA1-209ENST00000529963 DDX18Q9NVP1 670 aaKnown RBP4.44□□□□□ -1.7
AMBRA1-209ENST00000529963 NINJ2Q9NZG7 142 aa4.44□□□□□ -1.7
AMBRA1-209ENST00000529963 ZNF580Q9UK33 172 aa4.44□□□□□ -1.7
AMBRA1-209ENST00000529963 MCTS1Q9ULC4 181 aaKnown RBP4.44□□□□□ -1.7
AMBRA1-209ENST00000529963 OR2W1Q9Y3N9 320 aa4.44□□□□□ -1.7
AMBRA1-209ENST00000529963 A0A087WZY1 265 aa4.43□□□□□ -1.7
AMBRA1-209ENST00000529963 IGLV3-32A0A0A0MS00 114 aa4.43□□□□□ -1.7
AMBRA1-209ENST00000529963 A4D1N5 150 aa4.43□□□□□ -1.7
AMBRA1-209ENST00000529963 MAGEA13PA6NCF6 341 aa4.43□□□□□ -1.7
AMBRA1-209ENST00000529963 B4DXG7 233 aa4.43□□□□□ -1.7
AMBRA1-209ENST00000529963 TRIM49D1C9J1S8 452 aa4.43□□□□□ -1.7
AMBRA1-209ENST00000529963 ANKRD28O15084 1053 aa4.43□□□□□ -1.7
AMBRA1-209ENST00000529963 SS18L1O75177 396 aaPredicted RBP4.43□□□□□ -1.7
AMBRA1-209ENST00000529963 CRLF1O75462 422 aa4.43□□□□□ -1.7
AMBRA1-209ENST00000529963 UTS2O95399 124 aa4.43□□□□□ -1.7
AMBRA1-209ENST00000529963 ANXA4P09525 319 aaPredicted RBP4.43□□□□□ -1.7
AMBRA1-209ENST00000529963 HLA-DOBP13765 273 aa4.43□□□□□ -1.7
AMBRA1-209ENST00000529963 ME2P23368 584 aa4.43□□□□□ -1.7
AMBRA1-209ENST00000529963 RFX3P48380 749 aa4.43□□□□□ -1.7
AMBRA1-209ENST00000529963 PKNOX1P55347 436 aa4.43□□□□□ -1.7
AMBRA1-209ENST00000529963 RPS4XP62701 263 aaKnown RBP4.43□□□□□ -1.7
AMBRA1-209ENST00000529963 CKAP4Q07065 602 aaKnown RBP4.43□□□□□ -1.7
AMBRA1-209ENST00000529963 DMTNQ08495 405 aa4.43□□□□□ -1.7
AMBRA1-209ENST00000529963 ZNF763Q0D2J5 394 aa4.43□□□□□ -1.7
AMBRA1-209ENST00000529963 C17orf67Q0P5P2 114 aa4.43□□□□□ -1.7
AMBRA1-209ENST00000529963 C2orf80Q0P641 193 aa4.43□□□□□ -1.7
AMBRA1-209ENST00000529963 LCP2Q13094 533 aa4.43□□□□□ -1.7
AMBRA1-209ENST00000529963 VEZF1Q14119 521 aa4.43□□□□□ -1.7
AMBRA1-209ENST00000529963 FAM98BQ52LJ0 330 aaKnown RBP4.43□□□□□ -1.7
AMBRA1-209ENST00000529963 TCHHL1Q5QJ38 904 aaPredicted RBP4.43□□□□□ -1.7
AMBRA1-209ENST00000529963 ZNF678Q5SXM1 525 aa4.43□□□□□ -1.7
AMBRA1-209ENST00000529963 PDSS1Q5T2R2 415 aa4.43□□□□□ -1.7
AMBRA1-209ENST00000529963 TMEM107Q6UX40 140 aa4.43□□□□□ -1.7
AMBRA1-209ENST00000529963 STAC2Q6ZMT1 411 aa4.43□□□□□ -1.7
AMBRA1-209ENST00000529963 SH2D5Q6ZV89 423 aa4.43□□□□□ -1.7
AMBRA1-209ENST00000529963 MARCH3Q86UD3 253 aa4.43□□□□□ -1.7
AMBRA1-209ENST00000529963 TMEM219Q86XT9 240 aa4.43□□□□□ -1.7
AMBRA1-209ENST00000529963 SLC22A9Q8IVM8 553 aa4.43□□□□□ -1.7
AMBRA1-209ENST00000529963 TUSC5Q8IXB3 177 aa4.43□□□□□ -1.7
AMBRA1-209ENST00000529963 C1orf87Q8N0U7 546 aa4.43□□□□□ -1.7
AMBRA1-209ENST00000529963 OR2L13Q8N349 312 aa4.43□□□□□ -1.7
AMBRA1-209ENST00000529963 MMGT1Q8N4V1 131 aa4.43□□□□□ -1.7
AMBRA1-209ENST00000529963 ZNF611Q8N823 705 aa4.43□□□□□ -1.7
AMBRA1-209ENST00000529963 OR10D3Q8NH80 312 aa4.43□□□□□ -1.7
AMBRA1-209ENST00000529963 CORO2AQ92828 525 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms