RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-231	ENST00000529540	LRRN3	E7EW58	273 aa		13.15	□□□□□ -0.31
NR1H3-231	ENST00000529540	NPIPA7	E9PJI5	369 aa		13.15	□□□□□ -0.31
NR1H3-231	ENST00000529540	GPR171	O14626	319 aa		13.15	□□□□□ -0.31
NR1H3-231	ENST00000529540	ZNF264	O43296	627 aa		13.15	□□□□□ -0.31
NR1H3-231	ENST00000529540	EIF4E2	O60573	245 aa	Known RBP	13.15	□□□□□ -0.31
NR1H3-231	ENST00000529540		P04436	131 aa		13.15	□□□□□ -0.31
NR1H3-231	ENST00000529540	NPIPA8	P0DM63	369 aa		13.15	□□□□□ -0.31
NR1H3-231	ENST00000529540	SAG	P10523	405 aa	Predicted RBP	13.15	□□□□□ -0.31
NR1H3-231	ENST00000529540	OR10A3	P58181	314 aa		13.15	□□□□□ -0.31
NR1H3-231	ENST00000529540	FOXK2	Q01167	660 aa		13.15	□□□□□ -0.31
NR1H3-231	ENST00000529540	BAMBI	Q13145	260 aa		13.15	□□□□□ -0.31
NR1H3-231	ENST00000529540	CAMK2D	Q13557	499 aa		13.15	□□□□□ -0.31
NR1H3-231	ENST00000529540	MAPK14	Q16539	360 aa		13.15	□□□□□ -0.31
NR1H3-231	ENST00000529540	DMKN	Q6E0U4	476 aa	Predicted RBP	13.15	□□□□□ -0.31
NR1H3-231	ENST00000529540	ARL9	Q6T311	187 aa		13.15	□□□□□ -0.31
NR1H3-231	ENST00000529540	CEACAM19	Q7Z692	300 aa		13.15	□□□□□ -0.31
NR1H3-231	ENST00000529540	SLC51B	Q86UW2	128 aa		13.15	□□□□□ -0.31
NR1H3-231	ENST00000529540	RANBP3L	Q86VV4	465 aa	Predicted RBP	13.15	□□□□□ -0.31
NR1H3-231	ENST00000529540	OR8H3	Q8N146	312 aa		13.15	□□□□□ -0.31
NR1H3-231	ENST00000529540	MS4A15	Q8N5U1	240 aa		13.15	□□□□□ -0.31
NR1H3-231	ENST00000529540	LSMEM1	Q8N8F7	131 aa		13.15	□□□□□ -0.31
NR1H3-231	ENST00000529540	PHOSPHO1	Q8TCT1	267 aa		13.15	□□□□□ -0.31
NR1H3-231	ENST00000529540	HAS2	Q92819	552 aa		13.15	□□□□□ -0.31
NR1H3-231	ENST00000529540	PRSS27	Q9BQR3	290 aa		13.15	□□□□□ -0.31
NR1H3-231	ENST00000529540	CACNG6	Q9BXT2	260 aa		13.15	□□□□□ -0.31
NR1H3-231	ENST00000529540	DLL4	Q9NR61	685 aa		13.15	□□□□□ -0.31
NR1H3-231	ENST00000529540	CMC2	Q9NRP2	79 aa		13.15	□□□□□ -0.31
NR1H3-231	ENST00000529540	UBQLN2	Q9UHD9	624 aa		13.15	□□□□□ -0.31
NR1H3-231	ENST00000529540	KCNE5	Q9UJ90	142 aa		13.15	□□□□□ -0.31
NR1H3-231	ENST00000529540	CAMK2A	Q9UQM7	478 aa		13.15	□□□□□ -0.31
NR1H3-231	ENST00000529540	FKBP7	Q9Y680	259 aa		13.15	□□□□□ -0.31
NR1H3-231	ENST00000529540	FAM183A	A6NL82	134 aa		13.14	□□□□□ -0.31
NR1H3-231	ENST00000529540	MKRN2OS	H3BPM6	223 aa		13.14	□□□□□ -0.31
NR1H3-231	ENST00000529540	FMO6P	O60774	539 aa		13.14	□□□□□ -0.31
NR1H3-231	ENST00000529540	CXCL3	P19876	107 aa		13.14	□□□□□ -0.31
NR1H3-231	ENST00000529540	RAB3B	P20337	219 aa		13.14	□□□□□ -0.31
NR1H3-231	ENST00000529540	MSX1	P28360	303 aa		13.14	□□□□□ -0.31
NR1H3-231	ENST00000529540	SLC6A8	P48029	635 aa		13.14	□□□□□ -0.31
NR1H3-231	ENST00000529540	SRP9	P49458	86 aa	Known RBP	13.14	□□□□□ -0.31
NR1H3-231	ENST00000529540	SUMO3	P55854	103 aa	Predicted RBP	13.14	□□□□□ -0.31
NR1H3-231	ENST00000529540	FXYD6P3	P58550	94 aa		13.14	□□□□□ -0.31
NR1H3-231	ENST00000529540	KLF9	Q13886	244 aa	Predicted RBP	13.14	□□□□□ -0.31
NR1H3-231	ENST00000529540	GRK1	Q15835	563 aa		13.14	□□□□□ -0.31
NR1H3-231	ENST00000529540	ST3GAL2	Q16842	350 aa		13.14	□□□□□ -0.31
NR1H3-231	ENST00000529540	LGALSL	Q3ZCW2	172 aa	Predicted RBP	13.14	□□□□□ -0.31
NR1H3-231	ENST00000529540	IGFL2	Q6UWQ7	119 aa		13.14	□□□□□ -0.31
NR1H3-231	ENST00000529540	SEZ6L2	Q6UXD5	910 aa		13.14	□□□□□ -0.31
NR1H3-231	ENST00000529540	KRT74	Q7RTS7	529 aa		13.14	□□□□□ -0.31
NR1H3-231	ENST00000529540	COMMD7	Q86VX2	200 aa		13.14	□□□□□ -0.31
NR1H3-231	ENST00000529540	KDF1	Q8NAX2	398 aa	Predicted RBP	13.14	□□□□□ -0.31
NR1H3-231	ENST00000529540	FAM71C	Q8NEG0	241 aa		13.14	□□□□□ -0.31
NR1H3-231	ENST00000529540	FDCSP	Q8NFU4	85 aa		13.14	□□□□□ -0.31
NR1H3-231	ENST00000529540	OR56B4	Q8NH76	319 aa		13.14	□□□□□ -0.31
NR1H3-231	ENST00000529540	GRHL3	Q8TE85	626 aa		13.14	□□□□□ -0.31
NR1H3-231	ENST00000529540	PGLYRP3	Q96LB9	341 aa		13.14	□□□□□ -0.31
NR1H3-231	ENST00000529540	HS6ST2	Q96MM7	605 aa		13.14	□□□□□ -0.31
NR1H3-231	ENST00000529540	SMAD5	Q99717	465 aa	Known RBP	13.14	□□□□□ -0.31
NR1H3-231	ENST00000529540	CLEC4M	Q9H2X3	399 aa	Predicted RBP	13.14	□□□□□ -0.31
NR1H3-231	ENST00000529540	PLEKHA1	Q9HB21	404 aa		13.14	□□□□□ -0.31
NR1H3-231	ENST00000529540	SH2D2A	Q9NP31	389 aa		13.14	□□□□□ -0.31
NR1H3-231	ENST00000529540	ZMIZ1	Q9ULJ6	1067 aa		13.14	□□□□□ -0.31
NR1H3-231	ENST00000529540	SLC7A7	Q9UM01	511 aa		13.14	□□□□□ -0.31
NR1H3-231	ENST00000529540	WIF1	Q9Y5W5	379 aa		13.14	□□□□□ -0.31
NR1H3-231	ENST00000529540	NIN	Q8N4C6	2090 aa		13.13	□□□□□ -0.31
NR1H3-231	ENST00000529540	TRAPPC13	A5PLN9	417 aa		13.13	□□□□□ -0.31
NR1H3-231	ENST00000529540		E9PI62	339 aa		13.13	□□□□□ -0.31
NR1H3-231	ENST00000529540	ZNF593	O00488	134 aa	Predicted RBP	13.13	□□□□□ -0.31
NR1H3-231	ENST00000529540	PRAF2	O60831	178 aa		13.13	□□□□□ -0.31
NR1H3-231	ENST00000529540	LYPD3	O95274	346 aa		13.13	□□□□□ -0.31
NR1H3-231	ENST00000529540	WDPCP	O95876	746 aa		13.13	□□□□□ -0.31
NR1H3-231	ENST00000529540	SERPINA3	P01011	423 aa		13.13	□□□□□ -0.31
NR1H3-231	ENST00000529540	CD46	P15529	392 aa		13.13	□□□□□ -0.31
NR1H3-231	ENST00000529540	PRKACB	P22694	351 aa		13.13	□□□□□ -0.31
NR1H3-231	ENST00000529540	DNASE1	P24855	282 aa		13.13	□□□□□ -0.31
NR1H3-231	ENST00000529540	GIF	P27352	417 aa		13.13	□□□□□ -0.31
NR1H3-231	ENST00000529540	ZNF136	P52737	540 aa		13.13	□□□□□ -0.31
NR1H3-231	ENST00000529540	ACTC1	P68032	377 aa		13.13	□□□□□ -0.31
NR1H3-231	ENST00000529540	ACTA1	P68133	377 aa		13.13	□□□□□ -0.31
NR1H3-231	ENST00000529540	ARG2	P78540	354 aa		13.13	□□□□□ -0.31
NR1H3-231	ENST00000529540	EXOSC2	Q13868	293 aa	Known RBP	13.13	□□□□□ -0.31
NR1H3-231	ENST00000529540	AANAT	Q16613	207 aa		13.13	□□□□□ -0.31
NR1H3-231	ENST00000529540	SLC25A35	Q3KQZ1	300 aa		13.13	□□□□□ -0.31
NR1H3-231	ENST00000529540	FNDC7	Q5VTL7	733 aa		13.13	□□□□□ -0.31
NR1H3-231	ENST00000529540	LINC00696	Q6ZRV3	163 aa		13.13	□□□□□ -0.31
NR1H3-231	ENST00000529540	OR10H4	Q8NGA5	316 aa		13.13	□□□□□ -0.31
NR1H3-231	ENST00000529540	ANGPTL4	Q9BY76	406 aa		13.13	□□□□□ -0.31
NR1H3-231	ENST00000529540	LAT2	Q9GZY6	243 aa		13.13	□□□□□ -0.31
NR1H3-231	ENST00000529540	HAO2	Q9NYQ3	351 aa		13.13	□□□□□ -0.31
NR1H3-231	ENST00000529540	IL20RA	Q9UHF4	553 aa		13.13	□□□□□ -0.31
NR1H3-231	ENST00000529540	TMEM5	Q9Y2B1	443 aa		13.13	□□□□□ -0.31
NR1H3-231	ENST00000529540	SNAPC5	O75971	98 aa		13.12	□□□□□ -0.31
NR1H3-231	ENST00000529540	OR7A10	O76100	309 aa		13.12	□□□□□ -0.31
NR1H3-231	ENST00000529540	RCBTB2	O95199	551 aa		13.12	□□□□□ -0.31
NR1H3-231	ENST00000529540	CD1A	P06126	327 aa		13.12	□□□□□ -0.31
NR1H3-231	ENST00000529540	SBK2	P0C263	348 aa		13.12	□□□□□ -0.31
NR1H3-231	ENST00000529540	SLC2A5	P22732	501 aa		13.12	□□□□□ -0.31
NR1H3-231	ENST00000529540	CD96	P40200	585 aa		13.12	□□□□□ -0.31
NR1H3-231	ENST00000529540	DGCR2	P98153	550 aa		13.12	□□□□□ -0.31
NR1H3-231	ENST00000529540	TAGLN	Q01995	201 aa	Known RBP	13.12	□□□□□ -0.31
NR1H3-231	ENST00000529540	DHODH	Q02127	395 aa		13.12	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms