RNA–Protein interactions for RNA: ENST00000527827.1

CPSF1-202, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-202ENST00000527827 SLC6A7Q99884 636 aa20.06■□□□□ 0.8
CPSF1-202ENST00000527827 CPPED1Q9BRF8 314 aaPredicted RBP20.06■□□□□ 0.8
CPSF1-202ENST00000527827 SLCO1B3Q9NPD5 702 aa20.06■□□□□ 0.8
CPSF1-202ENST00000527827 ESM1Q9NQ30 184 aa20.06■□□□□ 0.8
CPSF1-202ENST00000527827 NANSQ9NR45 359 aa20.06■□□□□ 0.8
CPSF1-202ENST00000527827 NIPSNAP3AQ9UFN0 247 aaPredicted RBP20.06■□□□□ 0.8
CPSF1-202ENST00000527827 ANGPT4Q9Y264 503 aa20.06■□□□□ 0.8
CPSF1-202ENST00000527827 A0A0G2JMP0 313 aa20.05■□□□□ 0.8
CPSF1-202ENST00000527827 A0A0X1KG70 313 aa20.05■□□□□ 0.8
CPSF1-202ENST00000527827 EVPLLA8MZ36 301 aa20.05■□□□□ 0.8
CPSF1-202ENST00000527827 POLR3GO15318 223 aaPredicted RBP20.05■□□□□ 0.8
CPSF1-202ENST00000527827 OPN1SWP03999 348 aa20.05■□□□□ 0.8
CPSF1-202ENST00000527827 RAD52P43351 418 aa20.05■□□□□ 0.8
CPSF1-202ENST00000527827 LIMS1P48059 325 aa20.05■□□□□ 0.8
CPSF1-202ENST00000527827 TEKQ02763 1124 aa20.05■□□□□ 0.8
CPSF1-202ENST00000527827 HIST3H3Q16695 136 aa20.05■□□□□ 0.8
CPSF1-202ENST00000527827 SLC36A2Q495M3 483 aa20.05■□□□□ 0.8
CPSF1-202ENST00000527827 DLEU7Q6UYE1 221 aa20.05■□□□□ 0.8
CPSF1-202ENST00000527827 SLC16A14Q7RTX9 510 aa20.05■□□□□ 0.8
CPSF1-202ENST00000527827 RBM45Q8IUH3 476 aaKnown RBP20.05■□□□□ 0.8
CPSF1-202ENST00000527827 OR4M2Q8NGB6 313 aa20.05■□□□□ 0.8
CPSF1-202ENST00000527827 OR4D11Q8NGI4 311 aa20.05■□□□□ 0.8
CPSF1-202ENST00000527827 OR1J2Q8NGS2 313 aa20.05■□□□□ 0.8
CPSF1-202ENST00000527827 MCHR2Q969V1 340 aa20.05■□□□□ 0.8
CPSF1-202ENST00000527827 TLCD1Q96CP7 247 aa20.05■□□□□ 0.8
CPSF1-202ENST00000527827 EBF4Q9BQW3 602 aa20.05■□□□□ 0.8
CPSF1-202ENST00000527827 SUCNR1Q9BXA5 334 aa20.05■□□□□ 0.8
CPSF1-202ENST00000527827 BCL2L14Q9BZR8 327 aa20.05■□□□□ 0.8
CPSF1-202ENST00000527827 TRIM33Q9UPN9 1127 aa20.05■□□□□ 0.8
CPSF1-202ENST00000527827 CLDN25C9JDP6 229 aa20.04■□□□□ 0.8
CPSF1-202ENST00000527827 J3QLI3 93 aa20.04■□□□□ 0.8
CPSF1-202ENST00000527827 MMP7P09237 267 aaPredicted RBP20.04■□□□□ 0.8
CPSF1-202ENST00000527827 ASAH2BP0C7U1 165 aa20.04■□□□□ 0.8
CPSF1-202ENST00000527827 IDH3AP50213 366 aa20.04■□□□□ 0.8
CPSF1-202ENST00000527827 GLO1Q04760 184 aa20.04■□□□□ 0.8
CPSF1-202ENST00000527827 NRN1LQ496H8 165 aa20.04■□□□□ 0.8
CPSF1-202ENST00000527827 TTC33Q6PID6 262 aaPredicted RBP20.04■□□□□ 0.8
CPSF1-202ENST00000527827 ZDHHC22Q8N966 263 aa20.04■□□□□ 0.8
CPSF1-202ENST00000527827 ICA1LQ8NDH6 482 aa20.04■□□□□ 0.8
CPSF1-202ENST00000527827 RBM15BQ8NDT2 890 aaKnown RBP20.04■□□□□ 0.8
CPSF1-202ENST00000527827 ZNF347Q96SE7 839 aa20.04■□□□□ 0.8
CPSF1-202ENST00000527827 DECR2Q9NUI1 292 aa20.04■□□□□ 0.8
CPSF1-202ENST00000527827 ZNF229Q9UJW7 825 aa20.04■□□□□ 0.8
CPSF1-202ENST00000527827 M0QX08 132 aa20.03■□□□□ 0.8
CPSF1-202ENST00000527827 KPNA4O00629 521 aaPredicted RBP20.03■□□□□ 0.8
CPSF1-202ENST00000527827 ERLIN1O75477 346 aa20.03■□□□□ 0.8
CPSF1-202ENST00000527827 BCL10O95999 233 aa20.03■□□□□ 0.8
CPSF1-202ENST00000527827 PTHP01270 115 aa20.03■□□□□ 0.8
CPSF1-202ENST00000527827 IGHV3-13P01766 116 aa20.03■□□□□ 0.8
CPSF1-202ENST00000527827 IGHG1P01857 330 aa20.03■□□□□ 0.8
CPSF1-202ENST00000527827 TSTQ16762 297 aaKnown RBP20.03■□□□□ 0.8
CPSF1-202ENST00000527827 RUNDC3AQ59EK9 446 aa20.03■□□□□ 0.8
CPSF1-202ENST00000527827 TMEM255AQ5JRV8 349 aa20.03■□□□□ 0.8
CPSF1-202ENST00000527827 DCAF12L2Q5VW00 463 aa20.03■□□□□ 0.8
CPSF1-202ENST00000527827 ADAMTS16Q8TE57 1224 aa20.03■□□□□ 0.8
CPSF1-202ENST00000527827 ZNF426Q9BUY5 554 aa20.03■□□□□ 0.8
CPSF1-202ENST00000527827 SAP30LQ9HAJ7 183 aa20.03■□□□□ 0.8
CPSF1-202ENST00000527827 SLC7A7Q9UM01 511 aa20.03■□□□□ 0.8
CPSF1-202ENST00000527827 PKD1L1Q8TDX9 2849 aa20.03■□□□□ 0.8
CPSF1-202ENST00000527827 IQCMA0A1B0GVH7 501 aa20.02■□□□□ 0.8
CPSF1-202ENST00000527827 TPD52L2O43399 206 aaKnown RBP20.02■□□□□ 0.8
CPSF1-202ENST00000527827 TGDSO95455 350 aa20.02■□□□□ 0.8
CPSF1-202ENST00000527827 FSHBP01225 129 aa20.02■□□□□ 0.8
CPSF1-202ENST00000527827 MAKP20794 623 aa20.02■□□□□ 0.8
CPSF1-202ENST00000527827 CLRN1P58418 232 aa20.02■□□□□ 0.8
CPSF1-202ENST00000527827 PLP2Q04941 152 aa20.02■□□□□ 0.8
CPSF1-202ENST00000527827 MOGQ16653 247 aa20.02■□□□□ 0.8
CPSF1-202ENST00000527827 HFEQ30201 348 aa20.02■□□□□ 0.8
CPSF1-202ENST00000527827 AGKQ53H12 422 aa20.02■□□□□ 0.8
CPSF1-202ENST00000527827 AWAT1Q58HT5 328 aa20.02■□□□□ 0.8
CPSF1-202ENST00000527827 LRRC18Q8N456 261 aa20.02■□□□□ 0.8
CPSF1-202ENST00000527827 C11orf65Q8NCR3 313 aa20.02■□□□□ 0.8
CPSF1-202ENST00000527827 CPEB3Q8NE35 698 aaKnown RBP20.02■□□□□ 0.8
CPSF1-202ENST00000527827 OR1J1Q8NGS3 322 aa20.02■□□□□ 0.8
CPSF1-202ENST00000527827 VANGL1Q8TAA9 524 aaPredicted RBP20.02■□□□□ 0.8
CPSF1-202ENST00000527827 NANPQ8TBE9 248 aa20.02■□□□□ 0.8
CPSF1-202ENST00000527827 C7orf26Q96N11 449 aa20.02■□□□□ 0.8
CPSF1-202ENST00000527827 SEPHS2Q99611 448 aa20.02■□□□□ 0.8
CPSF1-202ENST00000527827 CCDC28BQ9BUN5 200 aa20.02■□□□□ 0.8
CPSF1-202ENST00000527827 MRPL13Q9BYD1 178 aaKnown RBP20.02■□□□□ 0.8
CPSF1-202ENST00000527827 LRMDAQ9H2I8 198 aa20.02■□□□□ 0.8
CPSF1-202ENST00000527827 OPN4Q9UHM6 478 aa20.02■□□□□ 0.8
CPSF1-202ENST00000527827 TANC2Q9HCD6 1990 aa20.02■□□□□ 0.8
CPSF1-202ENST00000527827 TRAPPC13A5PLN9 417 aa20.01■□□□□ 0.79
CPSF1-202ENST00000527827 KCNAB3O43448 404 aa20.01■□□□□ 0.79
CPSF1-202ENST00000527827 HIST1H2ABP04908 130 aa20.01■□□□□ 0.79
CPSF1-202ENST00000527827 DRD4P21917 467 aa20.01■□□□□ 0.79
CPSF1-202ENST00000527827 ZNF81P51508 661 aa20.01■□□□□ 0.79
CPSF1-202ENST00000527827 ZNF84P51523 738 aa20.01■□□□□ 0.79
CPSF1-202ENST00000527827 HIST3H2AQ7L7L0 130 aa20.01■□□□□ 0.79
CPSF1-202ENST00000527827 NOXO1Q8NFA2 376 aa20.01■□□□□ 0.79
CPSF1-202ENST00000527827 RAB1CQ92928 201 aa20.01■□□□□ 0.79
CPSF1-202ENST00000527827 HIST1H2ACQ93077 130 aa20.01■□□□□ 0.79
CPSF1-202ENST00000527827 MPP4Q96JB8 637 aa20.01■□□□□ 0.79
CPSF1-202ENST00000527827 SLC19A3Q9BZV2 496 aa20.01■□□□□ 0.79
CPSF1-202ENST00000527827 IGHV1-46P01743 117 aa20■□□□□ 0.79
CPSF1-202ENST00000527827 MT-ND5P03915 603 aa20■□□□□ 0.79
CPSF1-202ENST00000527827 UMPSP11172 480 aa20■□□□□ 0.79
CPSF1-202ENST00000527827 CD247P20963 164 aa20■□□□□ 0.79
CPSF1-202ENST00000527827 APLNRP35414 380 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms