RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 ELOVL3Q9HB03 270 aa13.83□□□□□ -0.2
USH1C-207ENST00000527720 MRPL22Q9NWU5 206 aaKnown RBP13.83□□□□□ -0.2
USH1C-207ENST00000527720 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.82□□□□□ -0.2
USH1C-207ENST00000527720 IGHV3-20A0A0C4DH32 117 aa13.82□□□□□ -0.2
USH1C-207ENST00000527720 TTLL8A6PVC2 850 aa13.82□□□□□ -0.2
USH1C-207ENST00000527720 GPANK1O95872 356 aa13.82□□□□□ -0.2
USH1C-207ENST00000527720 FREM3P0C091 2139 aa13.82□□□□□ -0.2
USH1C-207ENST00000527720 RPS27P42677 84 aaKnown RBP13.82□□□□□ -0.2
USH1C-207ENST00000527720 PTH2RP49190 550 aa13.82□□□□□ -0.2
USH1C-207ENST00000527720 MAP2K6P52564 334 aa13.82□□□□□ -0.2
USH1C-207ENST00000527720 WDR38Q5JTN6 314 aa13.82□□□□□ -0.2
USH1C-207ENST00000527720 ELFN2Q5R3F8 820 aa13.82□□□□□ -0.2
USH1C-207ENST00000527720 TMEM69Q5SWH9 247 aa13.82□□□□□ -0.2
USH1C-207ENST00000527720 KANSL1Q7Z3B3 1105 aa13.82□□□□□ -0.2
USH1C-207ENST00000527720 TMPRSS9Q7Z410 1059 aa13.82□□□□□ -0.2
USH1C-207ENST00000527720 LILRB4Q8NHJ6 448 aa13.82□□□□□ -0.2
USH1C-207ENST00000527720 MFSD8Q8NHS3 518 aa13.82□□□□□ -0.2
USH1C-207ENST00000527720 RNF138Q8WVD3 245 aa13.82□□□□□ -0.2
USH1C-207ENST00000527720 TTC9Q92623 222 aa13.82□□□□□ -0.2
USH1C-207ENST00000527720 HGDQ93099 445 aa13.82□□□□□ -0.2
USH1C-207ENST00000527720 C8orf44Q96CB5 159 aa13.82□□□□□ -0.2
USH1C-207ENST00000527720 NXPE2Q96DL1 559 aa13.82□□□□□ -0.2
USH1C-207ENST00000527720 AMELYQ99218 206 aa13.82□□□□□ -0.2
USH1C-207ENST00000527720 IER2Q9BTL4 223 aa13.82□□□□□ -0.2
USH1C-207ENST00000527720 OR11A1Q9GZK7 315 aa13.82□□□□□ -0.2
USH1C-207ENST00000527720 STEAP1Q9UHE8 339 aa13.82□□□□□ -0.2
USH1C-207ENST00000527720 ASCC3Q8N3C0 2202 aaKnown RBP13.82□□□□□ -0.2
USH1C-207ENST00000527720 A0A1B0GTH9 108 aa13.81□□□□□ -0.2
USH1C-207ENST00000527720 ZNF208O43345 1280 aa13.81□□□□□ -0.2
USH1C-207ENST00000527720 MT-ND4P03905 459 aa13.81□□□□□ -0.2
USH1C-207ENST00000527720 CTLA4P16410 223 aa13.81□□□□□ -0.2
USH1C-207ENST00000527720 CLDN12P56749 244 aa13.81□□□□□ -0.2
USH1C-207ENST00000527720 GLO1Q04760 184 aa13.81□□□□□ -0.2
USH1C-207ENST00000527720 FCN2Q15485 313 aa13.81□□□□□ -0.2
USH1C-207ENST00000527720 GSG1Q2KHT4 349 aa13.81□□□□□ -0.2
USH1C-207ENST00000527720 FGD2Q7Z6J4 655 aa13.81□□□□□ -0.2
USH1C-207ENST00000527720 TMPRSS12Q86WS5 348 aa13.81□□□□□ -0.2
USH1C-207ENST00000527720 OR52I2Q8NH67 350 aa13.81□□□□□ -0.2
USH1C-207ENST00000527720 DEDD2Q8WXF8 326 aa13.81□□□□□ -0.2
USH1C-207ENST00000527720 OR6C1Q96RD1 312 aa13.81□□□□□ -0.2
USH1C-207ENST00000527720 PTTG3PQ9NZH4 202 aa13.81□□□□□ -0.2
USH1C-207ENST00000527720 RARRES3Q9UL19 164 aa13.81□□□□□ -0.2
USH1C-207ENST00000527720 ATXN7L1Q9ULK2 861 aaPredicted RBP13.81□□□□□ -0.2
USH1C-207ENST00000527720 LAMA1P25391 3075 aa13.81□□□□□ -0.2
USH1C-207ENST00000527720 RALGAPA1Q6GYQ0 2036 aa13.81□□□□□ -0.2
USH1C-207ENST00000527720 ACOT7O00154 380 aa13.81□□□□□ -0.2
USH1C-207ENST00000527720 SCRG1O75711 98 aa13.81□□□□□ -0.2
USH1C-207ENST00000527720 CCR6P51684 374 aa13.81□□□□□ -0.2
USH1C-207ENST00000527720 FBXW4P57775 412 aa13.81□□□□□ -0.2
USH1C-207ENST00000527720 ADAM8P78325 824 aa13.81□□□□□ -0.2
USH1C-207ENST00000527720 DCDP81605 110 aaKnown RBP13.81□□□□□ -0.2
USH1C-207ENST00000527720 PUDPQ08623 228 aa13.81□□□□□ -0.2
USH1C-207ENST00000527720 ANGPT1Q15389 498 aa13.81□□□□□ -0.2
USH1C-207ENST00000527720 Q5BKY6 102 aa13.81□□□□□ -0.2
USH1C-207ENST00000527720 FAM205BPQ63HN1 556 aa13.81□□□□□ -0.2
USH1C-207ENST00000527720 DNM1P34Q6PK57 102 aa13.81□□□□□ -0.2
USH1C-207ENST00000527720 LRRC69Q6ZNQ3 347 aa13.81□□□□□ -0.2
USH1C-207ENST00000527720 SLC38A9Q8NBW4 561 aa13.81□□□□□ -0.2
USH1C-207ENST00000527720 OR5L2Q8NGL0 311 aa13.81□□□□□ -0.2
USH1C-207ENST00000527720 DNAJA3Q96EY1 480 aa13.81□□□□□ -0.2
USH1C-207ENST00000527720 HRASLSQ9HDD0 168 aa13.81□□□□□ -0.2
USH1C-207ENST00000527720 SUSD2Q9UGT4 822 aa13.81□□□□□ -0.2
USH1C-207ENST00000527720 CACNA1CQ13936 2221 aa13.81□□□□□ -0.2
USH1C-207ENST00000527720 TRAV8-7A0A075B6U6 113 aa13.8□□□□□ -0.2
USH1C-207ENST00000527720 VSTM2BA6NLU5 285 aa13.8□□□□□ -0.2
USH1C-207ENST00000527720 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.8□□□□□ -0.2
USH1C-207ENST00000527720 ETV2O00321 342 aaPredicted RBP13.8□□□□□ -0.2
USH1C-207ENST00000527720 PRAF2O60831 178 aa13.8□□□□□ -0.2
USH1C-207ENST00000527720 SPARCP09486 303 aa13.8□□□□□ -0.2
USH1C-207ENST00000527720 CSRP1P21291 193 aaKnown RBP13.8□□□□□ -0.2
USH1C-207ENST00000527720 DAP3P51398 398 aaKnown RBP13.8□□□□□ -0.2
USH1C-207ENST00000527720 RIDAP52758 137 aaKnown RBP13.8□□□□□ -0.2
USH1C-207ENST00000527720 LYSMD4Q5XG99 296 aa13.8□□□□□ -0.2
USH1C-207ENST00000527720 PAPD4Q6PIY7 484 aaKnown RBP13.8□□□□□ -0.2
USH1C-207ENST00000527720 DNM1P46Q6ZS02 220 aa13.8□□□□□ -0.2
USH1C-207ENST00000527720 KRT77Q7Z794 578 aa13.8□□□□□ -0.2
USH1C-207ENST00000527720 OR10AC1Q8NH08 325 aa13.8□□□□□ -0.2
USH1C-207ENST00000527720 TSEN15Q8WW01 171 aaKnown RBP13.8□□□□□ -0.2
USH1C-207ENST00000527720 DDIT4LQ96D03 193 aa13.8□□□□□ -0.2
USH1C-207ENST00000527720 RANBP3Q9H6Z4 567 aaPredicted RBP13.8□□□□□ -0.2
USH1C-207ENST00000527720 ING1Q9UK53 422 aaPredicted RBP13.8□□□□□ -0.2
USH1C-207ENST00000527720 ING4Q9UNL4 249 aa13.8□□□□□ -0.2
USH1C-207ENST00000527720 RCE1Q9Y256 329 aa13.8□□□□□ -0.2
USH1C-207ENST00000527720 SIT1Q9Y3P8 196 aa13.8□□□□□ -0.2
USH1C-207ENST00000527720 SDK1Q7Z5N4 2213 aa13.8□□□□□ -0.2
USH1C-207ENST00000527720 ANKRD20A5PA0PJZ0 165 aa13.8□□□□□ -0.2
USH1C-207ENST00000527720 MS4A18H0YCH9 400 aa13.8□□□□□ -0.2
USH1C-207ENST00000527720 MAS1P04201 325 aa13.8□□□□□ -0.2
USH1C-207ENST00000527720 CYC1P08574 325 aa13.8□□□□□ -0.2
USH1C-207ENST00000527720 ANXA3P12429 323 aa13.8□□□□□ -0.2
USH1C-207ENST00000527720 CDK2P24941 298 aa13.8□□□□□ -0.2
USH1C-207ENST00000527720 MSX1P28360 303 aa13.8□□□□□ -0.2
USH1C-207ENST00000527720 MS4A18Q3C1V0 323 aa13.8□□□□□ -0.2
USH1C-207ENST00000527720 OLFML2AQ68BL7 652 aa13.8□□□□□ -0.2
USH1C-207ENST00000527720 H1FNTQ75WM6 255 aaPredicted RBP13.8□□□□□ -0.2
USH1C-207ENST00000527720 SLC35D2Q76EJ3 337 aa13.8□□□□□ -0.2
USH1C-207ENST00000527720 SERPINA12Q8IW75 414 aa13.8□□□□□ -0.2
USH1C-207ENST00000527720 OR51A4Q8NGJ6 313 aa13.8□□□□□ -0.2
USH1C-207ENST00000527720 ASB10Q8WXI3 467 aa13.8□□□□□ -0.2
USH1C-207ENST00000527720 C20orf85Q9H1P6 137 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms