RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 SUPT3HB4E1H0 165 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 G3V2L1 256 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 PRAMEF26H0Y7S4 382 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 I3L1I5 382 aaPredicted RBP3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 M0R296 226 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 FXYD1O00168 92 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 SOCS6O14544 535 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 PHOX2AO14813 284 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 PPP1R2P9O14990 202 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 SEPT4O43236 478 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 FGF16O43320 207 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 NME2P1O60361 137 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 CDC40O60508 579 aaKnown RBP eCLIP3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 EIF4E2O60573 245 aaKnown RBP3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 PRAMEF11O60813 436 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 PROSCO94903 275 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 OR4F21O95013 312 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 YIF1AO95070 293 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 VNN2O95498 520 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 TCRBP04435 133 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 CLEC3BP05452 202 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 THP07101 528 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 ANXA2P07355 339 aaKnown RBP3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 OR5AC1P0C628 307 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 UQCRFS1P1P0C7P4 283 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 CTSAP10619 480 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 TDGF1P13385 188 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 CPN1P15169 458 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 KCNE1P15382 129 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 CD19P15391 556 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 IL1RNP18510 177 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 SDC1P18827 310 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 GZMHP20718 246 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 ZNF10P21506 573 aaPredicted RBP3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 HNRNPA2B1P22626 353 aaKnown RBP3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 ANOS1P23352 680 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 ACKR3P25106 362 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 SHC1P29353 583 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 AVPR2P30518 371 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 AKT1P31749 480 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 BRS3P32247 399 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 BTCP35070 178 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 RPL22P35268 128 aaKnown RBP3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 AKR1C3P42330 323 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 MAGEA12P43365 314 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 GSK3BP49841 420 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 TAF6P49848 677 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 HTR6P50406 440 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 PDLIM4P50479 330 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 CRISP1P54107 249 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 PNLIPRP2P54317 469 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 STXBP1P61764 594 aaKnown RBP3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 RAB1AP62820 205 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 PPIAP62937 165 aaKnown RBP3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 MXD1Q05195 221 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 RBPJQ06330 500 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 UBE2V1Q13404 147 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 SNTB2Q13425 540 aaKnown RBP3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 PPIGQ13427 754 aaKnown RBP eCLIP3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 TPBGQ13641 420 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 IL18Q14116 193 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 CLINT1Q14677 625 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 HERPUD1Q15011 391 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 RPE65Q16518 533 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 AGKQ53H12 422 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 KHDC3LQ587J8 217 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 CARD16Q5EG05 197 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 PRAMEF5Q5TYX0 476 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 KHDRBS2Q5VWX1 349 aaKnown RBP3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 PRAMEF6Q5VXH4 476 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 SLC22A10Q63ZE4 541 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 TMEM198Q66K66 360 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 OR4F3Q6IEY1 312 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 FBXW12Q6X9E4 464 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 DEF8Q6ZN54 512 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 PID1Q7Z2X4 250 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 NUFIP2Q7Z417 695 aaKnown RBP3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 FAM220AQ7Z4H9 259 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 SERPINA11Q86U17 422 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 DTX2Q86UW9 622 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 SLC30A8Q8IWU4 369 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 NRMQ8IXM6 262 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 FBXO39Q8N4B4 442 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 BPIFB2Q8N4F0 458 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 C11orf42Q8N5U0 333 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 KCTD6Q8NC69 237 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 FBXL13Q8NEE6 735 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 SDR9C7Q8NEX9 313 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 ATP6V1C2Q8NEY4 427 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 RDM1Q8NG50 284 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 OR2AP1Q8NGE2 309 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 OR5B17Q8NGF7 314 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 OR11L1Q8NGX0 322 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 LMO3Q8TAP4 145 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 CYP2W1Q8TAV3 490 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 ZCCHC10Q8TBK6 192 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 C11orf40Q8WZ69 217 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 SCAMP4Q969E2 229 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 SPSB1Q96BD6 273 aa3.34□□□□□ -1.87
CLNS1A-209ENST00000527299 PPP1R16AQ96I34 528 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms