RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 LMX1AQ8TE12 382 aa10.01□□□□□ -0.81
HDAC9-228ENST00000524023 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.01□□□□□ -0.81
HDAC9-228ENST00000524023 TSEN15Q8WW01 171 aaKnown RBP10.01□□□□□ -0.81
HDAC9-228ENST00000524023 OR8B4Q96RC9 309 aa10.01□□□□□ -0.81
HDAC9-228ENST00000524023 NRSN2Q9GZP1 204 aa10.01□□□□□ -0.81
HDAC9-228ENST00000524023 ELOVL3Q9HB03 270 aa10.01□□□□□ -0.81
HDAC9-228ENST00000524023 B9D1Q9UPM9 204 aa10.01□□□□□ -0.81
HDAC9-228ENST00000524023 IGKV3D-11A0A0A0MRZ8 115 aa10□□□□□ -0.81
HDAC9-228ENST00000524023 HSFX4A0A1B0GTS1 333 aaPredicted RBP10□□□□□ -0.81
HDAC9-228ENST00000524023 HSFX3A0A1B0GWH4 333 aaPredicted RBP10□□□□□ -0.81
HDAC9-228ENST00000524023 CIB4A0PJX0 185 aa10□□□□□ -0.81
HDAC9-228ENST00000524023 CDC14CA4D256 554 aa10□□□□□ -0.81
HDAC9-228ENST00000524023 I3L521 148 aa10□□□□□ -0.81
HDAC9-228ENST00000524023 WISP1O95388 367 aa10□□□□□ -0.81
HDAC9-228ENST00000524023 HLA-DQA2P01906 255 aa10□□□□□ -0.81
HDAC9-228ENST00000524023 ITGA5P08648 1049 aa10□□□□□ -0.81
HDAC9-228ENST00000524023 CSF1P09603 554 aa10□□□□□ -0.81
HDAC9-228ENST00000524023 VSIG10L2P0DP72 767 aa10□□□□□ -0.81
HDAC9-228ENST00000524023 CXCL2P19875 107 aa10□□□□□ -0.81
HDAC9-228ENST00000524023 IL12BP29460 328 aa10□□□□□ -0.81
HDAC9-228ENST00000524023 POU3F4P49335 361 aa10□□□□□ -0.81
HDAC9-228ENST00000524023 RAB14P61106 215 aa10□□□□□ -0.81
HDAC9-228ENST00000524023 KCNAB1Q14722 419 aa10□□□□□ -0.81
HDAC9-228ENST00000524023 RBMS2Q15434 407 aaKnown RBP10□□□□□ -0.81
HDAC9-228ENST00000524023 MEP1BQ16820 701 aa10□□□□□ -0.81
HDAC9-228ENST00000524023 CHRDL2Q6WN34 429 aa10□□□□□ -0.81
HDAC9-228ENST00000524023 SLC35D2Q76EJ3 337 aa10□□□□□ -0.81
HDAC9-228ENST00000524023 SLC36A1Q7Z2H8 476 aa10□□□□□ -0.81
HDAC9-228ENST00000524023 BIVMQ86UB2 503 aa10□□□□□ -0.81
HDAC9-228ENST00000524023 MARCH3Q86UD3 253 aa10□□□□□ -0.81
HDAC9-228ENST00000524023 GKN2Q86XP6 184 aa10□□□□□ -0.81
HDAC9-228ENST00000524023 OR52B4Q8NGK2 314 aa10□□□□□ -0.81
HDAC9-228ENST00000524023 METTL21AQ8WXB1 218 aa10□□□□□ -0.81
HDAC9-228ENST00000524023 RLN3Q8WXF3 142 aa10□□□□□ -0.81
HDAC9-228ENST00000524023 THRSPQ92748 146 aa10□□□□□ -0.81
HDAC9-228ENST00000524023 ELMOD3Q96FG2 381 aa10□□□□□ -0.81
HDAC9-228ENST00000524023 WDR89Q96FK6 387 aaPredicted RBP10□□□□□ -0.81
HDAC9-228ENST00000524023 FOXN4Q96NZ1 517 aa10□□□□□ -0.81
HDAC9-228ENST00000524023 DHRS9Q9BPW9 319 aa10□□□□□ -0.81
HDAC9-228ENST00000524023 NUDT9Q9BW91 350 aa10□□□□□ -0.81
HDAC9-228ENST00000524023 TMPRSS13Q9BYE2 586 aa10□□□□□ -0.81
HDAC9-228ENST00000524023 GSX2Q9BZM3 304 aa10□□□□□ -0.81
HDAC9-228ENST00000524023 CHRNA10Q9GZZ6 450 aa10□□□□□ -0.81
HDAC9-228ENST00000524023 NARFLQ9H6Q4 476 aa10□□□□□ -0.81
HDAC9-228ENST00000524023 CUTCQ9NTM9 273 aa10□□□□□ -0.81
HDAC9-228ENST00000524023 VCANP13611 3396 aa10□□□□□ -0.81
HDAC9-228ENST00000524023 COL5A1P20908 1838 aaPredicted RBP10□□□□□ -0.81
HDAC9-228ENST00000524023 PRSS37A4D1T9 235 aa9.99□□□□□ -0.81
HDAC9-228ENST00000524023 CDC40O60508 579 aaKnown RBP eCLIP9.99□□□□□ -0.81
HDAC9-228ENST00000524023 NUDT14O95848 222 aa9.99□□□□□ -0.81
HDAC9-228ENST00000524023 PLGP00747 810 aaPredicted RBP9.99□□□□□ -0.81
HDAC9-228ENST00000524023 HRGP04196 525 aa9.99□□□□□ -0.81
HDAC9-228ENST00000524023 RRASP10301 218 aa9.99□□□□□ -0.81
HDAC9-228ENST00000524023 M6PRP20645 277 aa9.99□□□□□ -0.81
HDAC9-228ENST00000524023 C4BPBP20851 252 aa9.99□□□□□ -0.81
HDAC9-228ENST00000524023 CCKBRP32239 447 aa9.99□□□□□ -0.81
HDAC9-228ENST00000524023 DCAF7P61962 342 aa9.99□□□□□ -0.81
HDAC9-228ENST00000524023 RIPPLY1Q0D2K3 151 aa9.99□□□□□ -0.81
HDAC9-228ENST00000524023 EBPQ15125 230 aaKnown RBP9.99□□□□□ -0.81
HDAC9-228ENST00000524023 RAB30Q15771 203 aa9.99□□□□□ -0.81
HDAC9-228ENST00000524023 ACKR1Q16570 336 aa9.99□□□□□ -0.81
HDAC9-228ENST00000524023 SGCBQ16585 318 aa9.99□□□□□ -0.81
HDAC9-228ENST00000524023 TEX30Q5JUR7 227 aa9.99□□□□□ -0.81
HDAC9-228ENST00000524023 NKAIN2Q5VXU1 208 aa9.99□□□□□ -0.81
HDAC9-228ENST00000524023 OR5M10Q6IEU7 315 aa9.99□□□□□ -0.81
HDAC9-228ENST00000524023 NHLRC1Q6VVB1 395 aa9.99□□□□□ -0.81
HDAC9-228ENST00000524023 MAMDC2Q7Z304 686 aaPredicted RBP9.99□□□□□ -0.81
HDAC9-228ENST00000524023 ZNF679Q8IYX0 411 aa9.99□□□□□ -0.81
HDAC9-228ENST00000524023 ZNF519Q8TB69 540 aa9.99□□□□□ -0.81
HDAC9-228ENST00000524023 RNF128Q8TEB7 428 aa9.99□□□□□ -0.81
HDAC9-228ENST00000524023 ASB17Q8WXJ9 295 aa9.99□□□□□ -0.81
HDAC9-228ENST00000524023 SLC25A36Q96CQ1 311 aa9.99□□□□□ -0.81
HDAC9-228ENST00000524023 SFXN2Q96NB2 322 aa9.99□□□□□ -0.81
HDAC9-228ENST00000524023 OR1F2PQ96R84 312 aa9.99□□□□□ -0.81
HDAC9-228ENST00000524023 GINS4Q9BRT9 223 aa9.99□□□□□ -0.81
HDAC9-228ENST00000524023 PTDSS2Q9BVG9 487 aa9.99□□□□□ -0.81
HDAC9-228ENST00000524023 TAS2R8Q9NYW2 309 aa9.99□□□□□ -0.81
HDAC9-228ENST00000524023 EPHA6Q9UF33 1036 aa9.99□□□□□ -0.81
HDAC9-228ENST00000524023 CDV3Q9UKY7 258 aaKnown RBP9.99□□□□□ -0.81
HDAC9-228ENST00000524023 SLC22A13Q9Y226 551 aa9.99□□□□□ -0.81
HDAC9-228ENST00000524023 CPAMD8Q8IZJ3 1885 aa9.99□□□□□ -0.81
HDAC9-228ENST00000524023 TEX51A0A1B0GUA7 166 aa9.99□□□□□ -0.81
HDAC9-228ENST00000524023 A0A1W2PQD3 144 aa9.99□□□□□ -0.81
HDAC9-228ENST00000524023 ALG1L2C9J202 215 aa9.99□□□□□ -0.81
HDAC9-228ENST00000524023 H3BMH7 237 aa9.99□□□□□ -0.81
HDAC9-228ENST00000524023 L7N2F9 121 aa9.99□□□□□ -0.81
HDAC9-228ENST00000524023 EIF4E2O60573 245 aaKnown RBP9.99□□□□□ -0.81
HDAC9-228ENST00000524023 TSPAN2O60636 221 aa9.99□□□□□ -0.81
HDAC9-228ENST00000524023 SLC25A12O75746 678 aa9.99□□□□□ -0.81
HDAC9-228ENST00000524023 MT-ATP6P00846 226 aa9.99□□□□□ -0.81
HDAC9-228ENST00000524023 FBXO45P0C2W1 286 aa9.99□□□□□ -0.81
HDAC9-228ENST00000524023 GP1BBP13224 206 aa9.99□□□□□ -0.81
HDAC9-228ENST00000524023 NME1P15531 152 aaKnown RBP9.99□□□□□ -0.81
HDAC9-228ENST00000524023 ZNF250P15622 560 aa9.99□□□□□ -0.81
HDAC9-228ENST00000524023 PGCP20142 388 aa9.99□□□□□ -0.81
HDAC9-228ENST00000524023 NFYAP23511 347 aaPredicted RBP9.99□□□□□ -0.81
HDAC9-228ENST00000524023 CSF2RBP32927 897 aa9.99□□□□□ -0.81
HDAC9-228ENST00000524023 CENPAP49450 140 aa9.99□□□□□ -0.81
HDAC9-228ENST00000524023 NR0B1P51843 470 aaKnown RBP9.99□□□□□ -0.81
HDAC9-228ENST00000524023 EFNA3P52797 238 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms