RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 LCTP09848 1927 aa12.66□□□□□ -0.38
SYNPO-205ENST00000522122 CD300LBA8K4G0 201 aa12.66□□□□□ -0.38
SYNPO-205ENST00000522122 AKR7A2O43488 359 aa12.66□□□□□ -0.38
SYNPO-205ENST00000522122 MT-ATP6P00846 226 aa12.66□□□□□ -0.38
SYNPO-205ENST00000522122 RAF1P04049 648 aa12.66□□□□□ -0.38
SYNPO-205ENST00000522122 BLVRBP30043 206 aaPredicted RBP12.66□□□□□ -0.38
SYNPO-205ENST00000522122 APLNRP35414 380 aa12.66□□□□□ -0.38
SYNPO-205ENST00000522122 ALDH3B1P43353 468 aa12.66□□□□□ -0.38
SYNPO-205ENST00000522122 MTCP1P56278 107 aa12.66□□□□□ -0.38
SYNPO-205ENST00000522122 NKAIN3Q8N8D7 197 aa12.66□□□□□ -0.38
SYNPO-205ENST00000522122 OR5T1Q8NG75 326 aa12.66□□□□□ -0.38
SYNPO-205ENST00000522122 GPR32P1Q8NGA4 272 aa12.66□□□□□ -0.38
SYNPO-205ENST00000522122 OR52I2Q8NH67 350 aa12.66□□□□□ -0.38
SYNPO-205ENST00000522122 DDOQ99489 341 aa12.66□□□□□ -0.38
SYNPO-205ENST00000522122 SLC38A1Q9H2H9 487 aa12.66□□□□□ -0.38
SYNPO-205ENST00000522122 PLEKHB1Q9UF11 243 aaPredicted RBP12.66□□□□□ -0.38
SYNPO-205ENST00000522122 ANKRD30BLA7E2S9 258 aa12.66□□□□□ -0.38
SYNPO-205ENST00000522122 MED6O75586 246 aa12.66□□□□□ -0.38
SYNPO-205ENST00000522122 HIST1H1CP16403 213 aaKnown RBP12.66□□□□□ -0.38
SYNPO-205ENST00000522122 CTHP32929 405 aa12.66□□□□□ -0.38
SYNPO-205ENST00000522122 DGCR2P98153 550 aa12.66□□□□□ -0.38
SYNPO-205ENST00000522122 ZNF628Q5EBL2 1059 aa12.66□□□□□ -0.38
SYNPO-205ENST00000522122 PLCXD3Q63HM9 321 aa12.66□□□□□ -0.38
SYNPO-205ENST00000522122 ADGRE4PQ86SQ3 457 aa12.66□□□□□ -0.38
SYNPO-205ENST00000522122 OR2A1Q8NGT9 310 aa12.66□□□□□ -0.38
SYNPO-205ENST00000522122 FGGYQ96C11 551 aa12.66□□□□□ -0.38
SYNPO-205ENST00000522122 ENKD1Q9H0I2 346 aa12.66□□□□□ -0.38
SYNPO-205ENST00000522122 ZNF286AQ9HBT8 521 aa12.66□□□□□ -0.38
SYNPO-205ENST00000522122 NSG1A0A0A6YYJ2 146 aa12.66□□□□□ -0.38
SYNPO-205ENST00000522122 A0A0B4J2A0 478 aa12.66□□□□□ -0.38
SYNPO-205ENST00000522122 TK1P04183 234 aa12.66□□□□□ -0.38
SYNPO-205ENST00000522122 CTSLP07711 333 aa12.66□□□□□ -0.38
SYNPO-205ENST00000522122 CALCBP10092 127 aa12.66□□□□□ -0.38
SYNPO-205ENST00000522122 FCGR2AP12318 317 aa12.66□□□□□ -0.38
SYNPO-205ENST00000522122 ZNF93P35789 620 aaPredicted RBP12.66□□□□□ -0.38
SYNPO-205ENST00000522122 DIO1P49895 249 aa12.66□□□□□ -0.38
SYNPO-205ENST00000522122 RPL23AP62750 156 aaKnown RBP12.66□□□□□ -0.38
SYNPO-205ENST00000522122 EEF1A2Q05639 463 aaKnown RBP12.66□□□□□ -0.38
SYNPO-205ENST00000522122 NR0B2Q15466 257 aa12.66□□□□□ -0.38
SYNPO-205ENST00000522122 SLC36A2Q495M3 483 aa12.66□□□□□ -0.38
SYNPO-205ENST00000522122 PAPD4Q6PIY7 484 aaKnown RBP12.66□□□□□ -0.38
SYNPO-205ENST00000522122 RBPMSQ93062 196 aaKnown RBP12.66□□□□□ -0.38
SYNPO-205ENST00000522122 PLA2G12AQ9BZM1 189 aa12.66□□□□□ -0.38
SYNPO-205ENST00000522122 SHPKQ9UHJ6 478 aa12.66□□□□□ -0.38
SYNPO-205ENST00000522122 OR52A1Q9UKL2 312 aa12.66□□□□□ -0.38
SYNPO-205ENST00000522122 RAB22AQ9UL26 194 aa12.66□□□□□ -0.38
SYNPO-205ENST00000522122 OR7C1O76099 320 aaPredicted RBP12.65□□□□□ -0.38
SYNPO-205ENST00000522122 SIX6O95475 246 aa12.65□□□□□ -0.38
SYNPO-205ENST00000522122 CSNK1EP49674 416 aaKnown RBP12.65□□□□□ -0.38
SYNPO-205ENST00000522122 CLDN17P56750 224 aa12.65□□□□□ -0.38
SYNPO-205ENST00000522122 ACSM1Q08AH1 577 aa12.65□□□□□ -0.38
SYNPO-205ENST00000522122 ZNF169Q14929 603 aaPredicted RBP12.65□□□□□ -0.38
SYNPO-205ENST00000522122 BBS1Q8NFJ9 593 aa12.65□□□□□ -0.38
SYNPO-205ENST00000522122 OR5D18Q8NGL1 313 aa12.65□□□□□ -0.38
SYNPO-205ENST00000522122 RSC1A1Q92681 617 aa12.65□□□□□ -0.38
SYNPO-205ENST00000522122 CNRIP1Q96F85 164 aaPredicted RBP12.65□□□□□ -0.38
SYNPO-205ENST00000522122 RADILQ96JH8 1075 aa12.65□□□□□ -0.38
SYNPO-205ENST00000522122 ARHGDIGQ99819 225 aa12.65□□□□□ -0.38
SYNPO-205ENST00000522122 NRSN2Q9GZP1 204 aa12.65□□□□□ -0.38
SYNPO-205ENST00000522122 SLC25A31Q9H0C2 315 aa12.65□□□□□ -0.38
SYNPO-205ENST00000522122 SCRG1O75711 98 aa12.65□□□□□ -0.38
SYNPO-205ENST00000522122 NAGAP17050 411 aa12.65□□□□□ -0.38
SYNPO-205ENST00000522122 POU3F2P20265 443 aaPredicted RBP12.65□□□□□ -0.38
SYNPO-205ENST00000522122 GALP22466 123 aa12.65□□□□□ -0.38
SYNPO-205ENST00000522122 MFAP5Q13361 173 aa12.65□□□□□ -0.38
SYNPO-205ENST00000522122 C1orf140Q5VVS0 124 aa12.65□□□□□ -0.38
SYNPO-205ENST00000522122 FCRL6Q6DN72 434 aa12.65□□□□□ -0.38
SYNPO-205ENST00000522122 MOB3CQ70IA8 216 aa12.65□□□□□ -0.38
SYNPO-205ENST00000522122 SYS1Q8N2H4 156 aa12.65□□□□□ -0.38
SYNPO-205ENST00000522122 ADAM18Q9Y3Q7 739 aa12.65□□□□□ -0.38
SYNPO-205ENST00000522122 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.65□□□□□ -0.38
SYNPO-205ENST00000522122 SNRNP70P08621 437 aaKnown RBP12.65□□□□□ -0.38
SYNPO-205ENST00000522122 ZNF44P15621 663 aa12.65□□□□□ -0.38
SYNPO-205ENST00000522122 IDH3GP51553 393 aaPredicted RBP12.65□□□□□ -0.38
SYNPO-205ENST00000522122 TAGLNQ01995 201 aaKnown RBP12.65□□□□□ -0.38
SYNPO-205ENST00000522122 LYSMD4Q5XG99 296 aa12.65□□□□□ -0.38
SYNPO-205ENST00000522122 LAIR1Q6GTX8 287 aa12.65□□□□□ -0.38
SYNPO-205ENST00000522122 MARCH3Q86UD3 253 aa12.65□□□□□ -0.38
SYNPO-205ENST00000522122 LIX1LQ8IVB5 337 aa12.65□□□□□ -0.38
SYNPO-205ENST00000522122 OR51S1Q8NGJ8 323 aa12.65□□□□□ -0.38
SYNPO-205ENST00000522122 CHAC2Q8WUX2 184 aa12.65□□□□□ -0.38
SYNPO-205ENST00000522122 LRFN5Q96NI6 719 aa12.65□□□□□ -0.38
SYNPO-205ENST00000522122 CCNL2Q96S94 520 aaPredicted RBP12.65□□□□□ -0.38
SYNPO-205ENST00000522122 MCOLN1Q9GZU1 580 aa12.65□□□□□ -0.38
SYNPO-205ENST00000522122 OLFM2O95897 454 aa12.65□□□□□ -0.38
SYNPO-205ENST00000522122 HCCSP53701 268 aa12.65□□□□□ -0.38
SYNPO-205ENST00000522122 PLA2G7Q13093 441 aa12.65□□□□□ -0.38
SYNPO-205ENST00000522122 LRRC18Q8N456 261 aa12.65□□□□□ -0.38
SYNPO-205ENST00000522122 OR56B2PQ8NGI1 322 aa12.65□□□□□ -0.38
SYNPO-205ENST00000522122 ARPC5LQ9BPX5 153 aa12.65□□□□□ -0.38
SYNPO-205ENST00000522122 A0A0A6YYD5 115 aa12.64□□□□□ -0.39
SYNPO-205ENST00000522122 H0Y8X5 98 aa12.64□□□□□ -0.39
SYNPO-205ENST00000522122 BCAT2O15382 392 aaPredicted RBP12.64□□□□□ -0.39
SYNPO-205ENST00000522122 EIF4E2O60573 245 aaKnown RBP12.64□□□□□ -0.39
SYNPO-205ENST00000522122 TPOP07202 933 aa12.64□□□□□ -0.39
SYNPO-205ENST00000522122 SPI1P17947 270 aa12.64□□□□□ -0.39
SYNPO-205ENST00000522122 GDF1P27539 372 aa12.64□□□□□ -0.39
SYNPO-205ENST00000522122 SUMF2Q8NBJ7 301 aa12.64□□□□□ -0.39
SYNPO-205ENST00000522122 IL1F10Q8WWZ1 152 aa12.64□□□□□ -0.39
SYNPO-205ENST00000522122 PCDHGA1Q9Y5H4 931 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms