RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 PRKAA2P54646 552 aa7.31□□□□□ -1.24
TRAPPC9-212ENST00000521944 HBA1P69905 142 aa7.31□□□□□ -1.24
TRAPPC9-212ENST00000521944 EGR4Q05215 589 aa7.31□□□□□ -1.24
TRAPPC9-212ENST00000521944 EPS8Q12929 822 aa7.31□□□□□ -1.24
TRAPPC9-212ENST00000521944 PMS2P3Q13401 168 aa7.31□□□□□ -1.24
TRAPPC9-212ENST00000521944 NSUN5P1Q3KNT7 163 aa7.31□□□□□ -1.24
TRAPPC9-212ENST00000521944 SPATA46Q5T0L3 261 aa7.31□□□□□ -1.24
TRAPPC9-212ENST00000521944 THEM4Q5T1C6 240 aa7.31□□□□□ -1.24
TRAPPC9-212ENST00000521944 DHRS7BQ6IAN0 325 aaPredicted RBP7.31□□□□□ -1.24
TRAPPC9-212ENST00000521944 WDR88Q6ZMY6 472 aa7.31□□□□□ -1.24
TRAPPC9-212ENST00000521944 C1orf122Q6ZSJ8 110 aa7.31□□□□□ -1.24
TRAPPC9-212ENST00000521944 C6orf120Q7Z4R8 191 aa7.31□□□□□ -1.24
TRAPPC9-212ENST00000521944 KLBQ86Z14 1044 aa7.31□□□□□ -1.24
TRAPPC9-212ENST00000521944 ZNF101Q8IZC7 436 aa7.31□□□□□ -1.24
TRAPPC9-212ENST00000521944 SPC24Q8NBT2 197 aa7.31□□□□□ -1.24
TRAPPC9-212ENST00000521944 PIK3C3Q8NEB9 887 aa7.31□□□□□ -1.24
TRAPPC9-212ENST00000521944 MUC7Q8TAX7 377 aa7.31□□□□□ -1.24
TRAPPC9-212ENST00000521944 SFXN5Q8TD22 340 aa7.31□□□□□ -1.24
TRAPPC9-212ENST00000521944 IPCEF1Q8WWN9 437 aaPredicted RBP7.31□□□□□ -1.24
TRAPPC9-212ENST00000521944 MTERF3Q96E29 417 aa7.31□□□□□ -1.24
TRAPPC9-212ENST00000521944 L3HYPDHQ96EM0 354 aa7.31□□□□□ -1.24
TRAPPC9-212ENST00000521944 METTL2AQ96IZ6 378 aaKnown RBP7.31□□□□□ -1.24
TRAPPC9-212ENST00000521944 TXNDC15Q96J42 360 aa7.31□□□□□ -1.24
TRAPPC9-212ENST00000521944 ARHGDIGQ99819 225 aa7.31□□□□□ -1.24
TRAPPC9-212ENST00000521944 FOXB1Q99853 325 aa7.31□□□□□ -1.24
TRAPPC9-212ENST00000521944 EMC6Q9BV81 110 aa7.31□□□□□ -1.24
TRAPPC9-212ENST00000521944 EGLN1Q9GZT9 426 aa7.31□□□□□ -1.24
TRAPPC9-212ENST00000521944 MSL2Q9HCI7 577 aa7.31□□□□□ -1.24
TRAPPC9-212ENST00000521944 C1orf109Q9NX04 203 aa7.31□□□□□ -1.24
TRAPPC9-212ENST00000521944 TMEM216Q9P0N5 145 aa7.31□□□□□ -1.24
TRAPPC9-212ENST00000521944 SNX12Q9UMY4 172 aa7.31□□□□□ -1.24
TRAPPC9-212ENST00000521944 STK38LQ9Y2H1 464 aa7.31□□□□□ -1.24
TRAPPC9-212ENST00000521944 WDR45Q9Y484 360 aa7.31□□□□□ -1.24
TRAPPC9-212ENST00000521944 GPR45Q9Y5Y3 372 aa7.31□□□□□ -1.24
TRAPPC9-212ENST00000521944 USH1CQ9Y6N9 552 aa7.31□□□□□ -1.24
TRAPPC9-212ENST00000521944 LOC102725191A0A1B0GVB3 256 aa7.3□□□□□ -1.24
TRAPPC9-212ENST00000521944 MS4A18H0YCH9 400 aa7.3□□□□□ -1.24
TRAPPC9-212ENST00000521944 TMEM178BH3BS89 294 aa7.3□□□□□ -1.24
TRAPPC9-212ENST00000521944 UBL3O95164 117 aa7.3□□□□□ -1.24
TRAPPC9-212ENST00000521944 AK1P00568 194 aa7.3□□□□□ -1.24
TRAPPC9-212ENST00000521944 OR12D1P0DN82 309 aa7.3□□□□□ -1.24
TRAPPC9-212ENST00000521944 ATF4P18848 351 aaPredicted RBP7.3□□□□□ -1.24
TRAPPC9-212ENST00000521944 DRD4P21917 467 aa7.3□□□□□ -1.24
TRAPPC9-212ENST00000521944 SLC6A2P23975 617 aa7.3□□□□□ -1.24
TRAPPC9-212ENST00000521944 CXCR1P25024 350 aa7.3□□□□□ -1.24
TRAPPC9-212ENST00000521944 GABRA5P31644 462 aa7.3□□□□□ -1.24
TRAPPC9-212ENST00000521944 RPL4P36578 427 aaKnown RBP7.3□□□□□ -1.24
TRAPPC9-212ENST00000521944 TGFBR2P37173 567 aa7.3□□□□□ -1.24
TRAPPC9-212ENST00000521944 MDH2P40926 338 aaKnown RBP7.3□□□□□ -1.24
TRAPPC9-212ENST00000521944 WNT5AP41221 380 aa7.3□□□□□ -1.24
TRAPPC9-212ENST00000521944 EGFEM1PQ0D2K5 195 aa7.3□□□□□ -1.24
TRAPPC9-212ENST00000521944 COX10Q12887 443 aa7.3□□□□□ -1.24
TRAPPC9-212ENST00000521944 CAMK2DQ13557 499 aa7.3□□□□□ -1.24
TRAPPC9-212ENST00000521944 UAP1Q16222 522 aaPredicted RBP7.3□□□□□ -1.24
TRAPPC9-212ENST00000521944 MOGQ16653 247 aa7.3□□□□□ -1.24
TRAPPC9-212ENST00000521944 MS4A18Q3C1V0 323 aa7.3□□□□□ -1.24
TRAPPC9-212ENST00000521944 SPDYE7PQ495Y7 208 aa7.3□□□□□ -1.24
TRAPPC9-212ENST00000521944 LIPMQ5VYY2 423 aa7.3□□□□□ -1.24
TRAPPC9-212ENST00000521944 ZNF841Q6ZN19 808 aa7.3□□□□□ -1.24
TRAPPC9-212ENST00000521944 KLHDC1Q8N7A1 406 aa7.3□□□□□ -1.24
TRAPPC9-212ENST00000521944 ICA1LQ8NDH6 482 aa7.3□□□□□ -1.24
TRAPPC9-212ENST00000521944 MFSD8Q8NHS3 518 aa7.3□□□□□ -1.24
TRAPPC9-212ENST00000521944 MIPOL1Q8TD10 442 aa7.3□□□□□ -1.24
TRAPPC9-212ENST00000521944 OIT3Q8WWZ8 545 aa7.3□□□□□ -1.24
TRAPPC9-212ENST00000521944 SLC25A36Q96CQ1 311 aa7.3□□□□□ -1.24
TRAPPC9-212ENST00000521944 R3HDM4Q96D70 268 aa7.3□□□□□ -1.24
TRAPPC9-212ENST00000521944 LRR1Q96L50 414 aa7.3□□□□□ -1.24
TRAPPC9-212ENST00000521944 SH3GL3Q99963 347 aa7.3□□□□□ -1.24
TRAPPC9-212ENST00000521944 RHOXF2Q9BQY4 288 aa7.3□□□□□ -1.24
TRAPPC9-212ENST00000521944 PCGF1Q9BSM1 259 aa7.3□□□□□ -1.24
TRAPPC9-212ENST00000521944 MECRQ9BV79 373 aa7.3□□□□□ -1.24
TRAPPC9-212ENST00000521944 TAPBPLQ9BX59 468 aa7.3□□□□□ -1.24
TRAPPC9-212ENST00000521944 BCL2L14Q9BZR8 327 aa7.3□□□□□ -1.24
TRAPPC9-212ENST00000521944 OR51I1Q9H343 314 aa7.3□□□□□ -1.24
TRAPPC9-212ENST00000521944 TUBB1Q9H4B7 451 aa7.3□□□□□ -1.24
TRAPPC9-212ENST00000521944 RRAGDQ9NQL2 400 aaPredicted RBP7.3□□□□□ -1.24
TRAPPC9-212ENST00000521944 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.3□□□□□ -1.24
TRAPPC9-212ENST00000521944 RLIMQ9NVW2 624 aa7.3□□□□□ -1.24
TRAPPC9-212ENST00000521944 RPUSD1Q9UJJ7 312 aaKnown RBP7.3□□□□□ -1.24
TRAPPC9-212ENST00000521944 POFUT2Q9Y2G5 429 aa7.3□□□□□ -1.24
TRAPPC9-212ENST00000521944 IGHV1-69DA0A0B4J2H0 117 aa7.29□□□□□ -1.24
TRAPPC9-212ENST00000521944 CFAP73A6NFT4 308 aa7.29□□□□□ -1.24
TRAPPC9-212ENST00000521944 DUXAA6NLW8 204 aa7.29□□□□□ -1.24
TRAPPC9-212ENST00000521944 POC1B-GALNT4F8VUJ3 575 aa7.29□□□□□ -1.24
TRAPPC9-212ENST00000521944 RNASEK-C17orf49H0YIS7 233 aa7.29□□□□□ -1.24
TRAPPC9-212ENST00000521944 IGHV1-69P01742 117 aa7.29□□□□□ -1.24
TRAPPC9-212ENST00000521944 GKN3PP0CG01 181 aa7.29□□□□□ -1.24
TRAPPC9-212ENST00000521944 CD28P10747 220 aa7.29□□□□□ -1.24
TRAPPC9-212ENST00000521944 PRG2P13727 222 aa7.29□□□□□ -1.24
TRAPPC9-212ENST00000521944 UQCRC2P22695 453 aa7.29□□□□□ -1.24
TRAPPC9-212ENST00000521944 LSP1P33241 339 aa7.29□□□□□ -1.24
TRAPPC9-212ENST00000521944 GNB2P62879 340 aa7.29□□□□□ -1.24
TRAPPC9-212ENST00000521944 TNFAIP6P98066 277 aaPredicted RBP7.29□□□□□ -1.24
TRAPPC9-212ENST00000521944 SLC7A5Q01650 507 aa7.29□□□□□ -1.24
TRAPPC9-212ENST00000521944 GSTA3Q16772 222 aa7.29□□□□□ -1.24
TRAPPC9-212ENST00000521944 FAM153CQ494X1 144 aa7.29□□□□□ -1.24
TRAPPC9-212ENST00000521944 DMRTC1Q5HYR2 192 aa7.29□□□□□ -1.24
TRAPPC9-212ENST00000521944 MBNL2Q5VZF2 373 aaKnown RBP7.29□□□□□ -1.24
TRAPPC9-212ENST00000521944 SLC27A4Q6P1M0 643 aa7.29□□□□□ -1.24
TRAPPC9-212ENST00000521944 Q6ZR03 302 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms