RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 OVCH1Q7RTY7 1134 aa9.19□□□□□ -0.94
MCF2-209ENST00000520602 OR2T35Q8NGX2 323 aa9.19□□□□□ -0.94
MCF2-209ENST00000520602 OR52I2Q8NH67 350 aa9.19□□□□□ -0.94
MCF2-209ENST00000520602 OR14L1PQ8NHC6 308 aa9.19□□□□□ -0.94
MCF2-209ENST00000520602 GRPEL2Q8TAA5 225 aa9.19□□□□□ -0.94
MCF2-209ENST00000520602 TXNIPQ9H3M7 391 aa9.19□□□□□ -0.94
MCF2-209ENST00000520602 PRDM6Q9NQX0 595 aa9.19□□□□□ -0.94
MCF2-209ENST00000520602 HAO2Q9NYQ3 351 aa9.19□□□□□ -0.94
MCF2-209ENST00000520602 COMMD9Q9P000 198 aa9.19□□□□□ -0.94
MCF2-209ENST00000520602 MGAT4CQ9UBM8 478 aa9.19□□□□□ -0.94
MCF2-209ENST00000520602 CGGBP1Q9UFW8 167 aaPredicted RBP9.19□□□□□ -0.94
MCF2-209ENST00000520602 COLQQ9Y215 455 aaPredicted RBP9.19□□□□□ -0.94
MCF2-209ENST00000520602 TMA7Q9Y2S6 64 aaKnown RBP9.19□□□□□ -0.94
MCF2-209ENST00000520602 NUBP2Q9Y5Y2 271 aa9.19□□□□□ -0.94
MCF2-209ENST00000520602 CNOT1A5YKK6 2376 aaKnown RBP9.19□□□□□ -0.94
MCF2-209ENST00000520602 C2orf16Q68DN1 1984 aa9.19□□□□□ -0.94
MCF2-209ENST00000520602 ACOT7O00154 380 aa9.19□□□□□ -0.94
MCF2-209ENST00000520602 DCTN6O00399 190 aa9.19□□□□□ -0.94
MCF2-209ENST00000520602 MPZL1O95297 269 aa9.19□□□□□ -0.94
MCF2-209ENST00000520602 CYB5AP00167 134 aa9.19□□□□□ -0.94
MCF2-209ENST00000520602 P04436 131 aa9.19□□□□□ -0.94
MCF2-209ENST00000520602 SLC2A5P22732 501 aa9.19□□□□□ -0.94
MCF2-209ENST00000520602 RRAS2P62070 204 aaPredicted RBP9.19□□□□□ -0.94
MCF2-209ENST00000520602 HSF1Q00613 529 aa9.19□□□□□ -0.94
MCF2-209ENST00000520602 NKPD1Q17RQ9 610 aa9.19□□□□□ -0.94
MCF2-209ENST00000520602 FAAP20Q6NZ36 180 aa9.19□□□□□ -0.94
MCF2-209ENST00000520602 GALNT6Q8NCL4 622 aa9.19□□□□□ -0.94
MCF2-209ENST00000520602 OR10G3Q8NGC4 313 aa9.19□□□□□ -0.94
MCF2-209ENST00000520602 DEDD2Q8WXF8 326 aa9.19□□□□□ -0.94
MCF2-209ENST00000520602 PGAM5Q96HS1 289 aa9.19□□□□□ -0.94
MCF2-209ENST00000520602 ARL5BQ96KC2 179 aa9.19□□□□□ -0.94
MCF2-209ENST00000520602 PPIL3Q9H2H8 161 aaKnown RBP9.19□□□□□ -0.94
MCF2-209ENST00000520602 COPZ2Q9P299 210 aa9.19□□□□□ -0.94
MCF2-209ENST00000520602 MGAT4AQ9UM21 535 aa9.19□□□□□ -0.94
MCF2-209ENST00000520602 OR6C76A6NM76 312 aa9.18□□□□□ -0.94
MCF2-209ENST00000520602 PLA2G10O15496 165 aa9.18□□□□□ -0.94
MCF2-209ENST00000520602 CER1O95813 267 aa9.18□□□□□ -0.94
MCF2-209ENST00000520602 WDPCPO95876 746 aa9.18□□□□□ -0.94
MCF2-209ENST00000520602 PLATP00750 562 aa9.18□□□□□ -0.94
MCF2-209ENST00000520602 MESTQ5EB52 335 aa9.18□□□□□ -0.94
MCF2-209ENST00000520602 RHBDD2Q6NTF9 364 aa9.18□□□□□ -0.94
MCF2-209ENST00000520602 OGFOD3Q6PK18 319 aa9.18□□□□□ -0.94
MCF2-209ENST00000520602 OPN5Q6U736 354 aa9.18□□□□□ -0.94
MCF2-209ENST00000520602 STAC2Q6ZMT1 411 aa9.18□□□□□ -0.94
MCF2-209ENST00000520602 ZNF704Q6ZNC4 412 aaPredicted RBP9.18□□□□□ -0.94
MCF2-209ENST00000520602 ABHD12BQ7Z5M8 362 aaPredicted RBP9.18□□□□□ -0.94
MCF2-209ENST00000520602 MAFAQ8NHW3 353 aaPredicted RBP9.18□□□□□ -0.94
MCF2-209ENST00000520602 CREB3L1Q96BA8 519 aa9.18□□□□□ -0.94
MCF2-209ENST00000520602 DCBLD2Q96PD2 775 aa9.18□□□□□ -0.94
MCF2-209ENST00000520602 KLHL13Q9P2N7 655 aa9.18□□□□□ -0.94
MCF2-209ENST00000520602 KIF26AQ9ULI4 1882 aaPredicted RBP9.18□□□□□ -0.94
MCF2-209ENST00000520602 SLC43A1O75387 559 aa9.18□□□□□ -0.94
MCF2-209ENST00000520602 IGHG1P01857 330 aa9.18□□□□□ -0.94
MCF2-209ENST00000520602 CCNOP22674 350 aa9.18□□□□□ -0.94
MCF2-209ENST00000520602 VAMP1P23763 118 aa9.18□□□□□ -0.94
MCF2-209ENST00000520602 DPP4P27487 766 aa9.18□□□□□ -0.94
MCF2-209ENST00000520602 ACSM1Q08AH1 577 aa9.18□□□□□ -0.94
MCF2-209ENST00000520602 IL10RAQ13651 578 aa9.18□□□□□ -0.94
MCF2-209ENST00000520602 CDONQ4KMG0 1287 aa9.18□□□□□ -0.94
MCF2-209ENST00000520602 GLYATL3Q5SZD4 288 aa9.18□□□□□ -0.94
MCF2-209ENST00000520602 ANKRD37Q7Z713 158 aa9.18□□□□□ -0.94
MCF2-209ENST00000520602 HAVCR2Q8TDQ0 301 aa9.18□□□□□ -0.94
MCF2-209ENST00000520602 GIMAP1Q8WWP7 306 aa9.18□□□□□ -0.94
MCF2-209ENST00000520602 ZNF501Q96CX3 271 aaPredicted RBP9.18□□□□□ -0.94
MCF2-209ENST00000520602 ACTR6Q9GZN1 396 aa9.18□□□□□ -0.94
MCF2-209ENST00000520602 FXYD6-FXYD2A0A087WZ82 144 aa9.18□□□□□ -0.94
MCF2-209ENST00000520602 RAB40ALP0C0E4 278 aa9.18□□□□□ -0.94
MCF2-209ENST00000520602 CTLA4P16410 223 aa9.18□□□□□ -0.94
MCF2-209ENST00000520602 APOBEC1P41238 236 aaKnown RBP9.18□□□□□ -0.94
MCF2-209ENST00000520602 POU3F4P49335 361 aa9.18□□□□□ -0.94
MCF2-209ENST00000520602 CLDN17P56750 224 aa9.18□□□□□ -0.94
MCF2-209ENST00000520602 GMFBP60983 142 aa9.18□□□□□ -0.94
MCF2-209ENST00000520602 RAB40AQ8WXH6 277 aa9.18□□□□□ -0.94
MCF2-209ENST00000520602 SDHCQ99643 169 aaPredicted RBP9.18□□□□□ -0.94
MCF2-209ENST00000520602 ABHD6Q9BV23 337 aa9.18□□□□□ -0.94
MCF2-209ENST00000520602 STRADBQ9C0K7 418 aa9.18□□□□□ -0.94
MCF2-209ENST00000520602 FXYD6Q9H0Q3 95 aa9.18□□□□□ -0.94
MCF2-209ENST00000520602 CDCP1Q9H5V8 836 aa9.18□□□□□ -0.94
MCF2-209ENST00000520602 EMC7Q9NPA0 242 aa9.18□□□□□ -0.94
MCF2-209ENST00000520602 OCIAD1Q9NX40 245 aa9.18□□□□□ -0.94
MCF2-209ENST00000520602 VSX1Q9NZR4 365 aaPredicted RBP9.18□□□□□ -0.94
MCF2-209ENST00000520602 TICRRQ7Z2Z1 1910 aa9.18□□□□□ -0.94
MCF2-209ENST00000520602 AIPO00170 330 aa9.17□□□□□ -0.94
MCF2-209ENST00000520602 HLA-DMAP28067 261 aa9.17□□□□□ -0.94
MCF2-209ENST00000520602 HOXD12P35452 270 aa9.17□□□□□ -0.94
MCF2-209ENST00000520602 RPS15P62841 145 aaKnown RBP9.17□□□□□ -0.94
MCF2-209ENST00000520602 SRYQ05066 204 aa9.17□□□□□ -0.94
MCF2-209ENST00000520602 DMRTC1Q5HYR2 192 aa9.17□□□□□ -0.94
MCF2-209ENST00000520602 TMEM244Q5VVB8 128 aa9.17□□□□□ -0.94
MCF2-209ENST00000520602 ZNF679Q8IYX0 411 aa9.17□□□□□ -0.94
MCF2-209ENST00000520602 OR13C9Q8NGT0 318 aa9.17□□□□□ -0.94
MCF2-209ENST00000520602 PHYHIPQ92561 330 aa9.17□□□□□ -0.94
MCF2-209ENST00000520602 KISS1RQ969F8 398 aaPredicted RBP9.17□□□□□ -0.94
MCF2-209ENST00000520602 NOX3Q9HBY0 568 aa9.17□□□□□ -0.94
MCF2-209ENST00000520602 KLK11Q9UBX7 282 aa9.17□□□□□ -0.94
MCF2-209ENST00000520602 MRM2Q9UI43 246 aaKnown RBP9.17□□□□□ -0.94
MCF2-209ENST00000520602 ZMIZ1Q9ULJ6 1067 aa9.17□□□□□ -0.94
MCF2-209ENST00000520602 TRAV1-2A0A0B4J238 106 aa9.17□□□□□ -0.94
MCF2-209ENST00000520602 ZNF208O43345 1280 aa9.17□□□□□ -0.94
MCF2-209ENST00000520602 POU3F3P20264 500 aaPredicted RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms