RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 EIF3GO75821 320 aaKnown RBP eCLIP2.99□□□□□ -1.93
SQLE-204ENST00000520493 SCELO95171 688 aa2.99□□□□□ -1.93
SQLE-204ENST00000520493 FARS2O95363 451 aaKnown RBP2.99□□□□□ -1.93
SQLE-204ENST00000520493 CD160O95971 181 aa2.99□□□□□ -1.93
SQLE-204ENST00000520493 HOXB8P17481 243 aaPredicted RBP2.99□□□□□ -1.93
SQLE-204ENST00000520493 CTRB1P17538 263 aa2.99□□□□□ -1.93
SQLE-204ENST00000520493 AQP1P29972 269 aa2.99□□□□□ -1.93
SQLE-204ENST00000520493 AQP2P41181 271 aa2.99□□□□□ -1.93
SQLE-204ENST00000520493 BTDP43251 543 aa2.99□□□□□ -1.93
SQLE-204ENST00000520493 P2RY4P51582 365 aa2.99□□□□□ -1.93
SQLE-204ENST00000520493 PSMD4P55036 377 aaKnown RBP2.99□□□□□ -1.93
SQLE-204ENST00000520493 RCAN2Q14206 197 aa2.99□□□□□ -1.93
SQLE-204ENST00000520493 TRAM2Q15035 370 aa2.99□□□□□ -1.93
SQLE-204ENST00000520493 KIAA0040Q15053 153 aa2.99□□□□□ -1.93
SQLE-204ENST00000520493 VAMP3Q15836 100 aa2.99□□□□□ -1.93
SQLE-204ENST00000520493 GSG1Q2KHT4 349 aa2.99□□□□□ -1.93
SQLE-204ENST00000520493 LCE1CQ5T751 118 aa2.99□□□□□ -1.93
SQLE-204ENST00000520493 LCE1BQ5T7P3 118 aa2.99□□□□□ -1.93
SQLE-204ENST00000520493 MARC1Q5VT66 337 aa2.99□□□□□ -1.93
SQLE-204ENST00000520493 CTRB2Q6GPI1 263 aa2.99□□□□□ -1.93
SQLE-204ENST00000520493 ANKRD26P1Q6NSI1 321 aa2.99□□□□□ -1.93
SQLE-204ENST00000520493 C1orf94Q6P1W5 598 aa2.99□□□□□ -1.93
SQLE-204ENST00000520493 Q6ZN92 141 aa2.99□□□□□ -1.93
SQLE-204ENST00000520493 MOB1BQ7L9L4 216 aa2.99□□□□□ -1.93
SQLE-204ENST00000520493 PEX26Q7Z412 305 aa2.99□□□□□ -1.93
SQLE-204ENST00000520493 ZNF546Q86UE3 836 aa2.99□□□□□ -1.93
SQLE-204ENST00000520493 MYOCDQ8IZQ8 938 aa2.99□□□□□ -1.93
SQLE-204ENST00000520493 TCAIMQ8N3R3 496 aa2.99□□□□□ -1.93
SQLE-204ENST00000520493 ZNF525Q8N782 197 aa2.99□□□□□ -1.93
SQLE-204ENST00000520493 ZNF740Q8NDX6 193 aa2.99□□□□□ -1.93
SQLE-204ENST00000520493 FBXO36Q8NEA4 188 aa2.99□□□□□ -1.93
SQLE-204ENST00000520493 OR56A4Q8NGH8 313 aa2.99□□□□□ -1.93
SQLE-204ENST00000520493 OR51S1Q8NGJ8 323 aa2.99□□□□□ -1.93
SQLE-204ENST00000520493 OR5K2Q8NHB8 316 aa2.99□□□□□ -1.93
SQLE-204ENST00000520493 RHOXF1Q8NHV9 184 aa2.99□□□□□ -1.93
SQLE-204ENST00000520493 NDNFQ8TB73 568 aa2.99□□□□□ -1.93
SQLE-204ENST00000520493 ZNF564Q8TBZ8 553 aaPredicted RBP2.99□□□□□ -1.93
SQLE-204ENST00000520493 LRRC20Q8TCA0 184 aa2.99□□□□□ -1.93
SQLE-204ENST00000520493 SLC7A13Q8TCU3 470 aa2.99□□□□□ -1.93
SQLE-204ENST00000520493 PIH1D2Q8WWB5 315 aa2.99□□□□□ -1.93
SQLE-204ENST00000520493 ACOT11Q8WXI4 607 aaPredicted RBP2.99□□□□□ -1.93
SQLE-204ENST00000520493 FRAT1Q92837 279 aaPredicted RBP2.99□□□□□ -1.93
SQLE-204ENST00000520493 FAM122AQ96E09 287 aa2.99□□□□□ -1.93
SQLE-204ENST00000520493 VSIG2Q96IQ7 327 aa2.99□□□□□ -1.93
SQLE-204ENST00000520493 SMIM14Q96QK8 99 aa2.99□□□□□ -1.93
SQLE-204ENST00000520493 PELOQ9BRX2 385 aaKnown RBP2.99□□□□□ -1.93
SQLE-204ENST00000520493 RIOK2Q9BVS4 552 aaKnown RBP2.99□□□□□ -1.93
SQLE-204ENST00000520493 PIGUQ9H490 435 aa2.99□□□□□ -1.93
SQLE-204ENST00000520493 SIAEQ9HAT2 523 aa2.99□□□□□ -1.93
SQLE-204ENST00000520493 KIF25Q9UIL4 384 aa2.99□□□□□ -1.93
SQLE-204ENST00000520493 KLHL21Q9UJP4 597 aa2.99□□□□□ -1.93
SQLE-204ENST00000520493 UBQLN1Q9UMX0 589 aaKnown RBP2.99□□□□□ -1.93
SQLE-204ENST00000520493 ING4Q9UNL4 249 aa2.99□□□□□ -1.93
SQLE-204ENST00000520493 FLVCR2Q9UPI3 526 aa2.99□□□□□ -1.93
SQLE-204ENST00000520493 CDH10Q9Y6N8 788 aa2.99□□□□□ -1.93
SQLE-204ENST00000520493 PHF3Q92576 2039 aaKnown RBP2.98□□□□□ -1.93
SQLE-204ENST00000520493 CFAP65Q6ZU64 1925 aaKnown RBP2.98□□□□□ -1.93
SQLE-204ENST00000520493 GLYATL1P3A0A0U1RQE8 302 aa2.98□□□□□ -1.93
SQLE-204ENST00000520493 A0A1W2PQ72 361 aa2.98□□□□□ -1.93
SQLE-204ENST00000520493 LYRM9A8MSI8 78 aa2.98□□□□□ -1.93
SQLE-204ENST00000520493 CETN3O15182 167 aa2.98□□□□□ -1.93
SQLE-204ENST00000520493 CLDN11O75508 207 aa2.98□□□□□ -1.93
SQLE-204ENST00000520493 CLIC3O95833 236 aa2.98□□□□□ -1.93
SQLE-204ENST00000520493 THY1P04216 161 aa2.98□□□□□ -1.93
SQLE-204ENST00000520493 SERPINA5P05154 406 aa2.98□□□□□ -1.93
SQLE-204ENST00000520493 OR8U8P0C7N1 319 aa2.98□□□□□ -1.93
SQLE-204ENST00000520493 CXCR2P25025 360 aa2.98□□□□□ -1.93
SQLE-204ENST00000520493 SPAM1P38567 509 aa2.98□□□□□ -1.93
SQLE-204ENST00000520493 KLK7P49862 253 aa2.98□□□□□ -1.93
SQLE-204ENST00000520493 SLC26A2P50443 739 aa2.98□□□□□ -1.93
SQLE-204ENST00000520493 CRISP1P54107 249 aa2.98□□□□□ -1.93
SQLE-204ENST00000520493 KRTAP10-1P60331 282 aa2.98□□□□□ -1.93
SQLE-204ENST00000520493 LCN2P80188 198 aa2.98□□□□□ -1.93
SQLE-204ENST00000520493 BCL2L1Q07817 233 aa2.98□□□□□ -1.93
SQLE-204ENST00000520493 C1orf146Q5VVC0 180 aa2.98□□□□□ -1.93
SQLE-204ENST00000520493 GPR107Q5VW38 600 aa2.98□□□□□ -1.93
SQLE-204ENST00000520493 ZNF571Q7Z3V5 609 aaPredicted RBP2.98□□□□□ -1.93
SQLE-204ENST00000520493 C6orf223Q8N319 242 aa2.98□□□□□ -1.93
SQLE-204ENST00000520493 GPD1LQ8N335 351 aa2.98□□□□□ -1.93
SQLE-204ENST00000520493 VN1R2Q8NFZ6 395 aa2.98□□□□□ -1.93
SQLE-204ENST00000520493 ZNF596Q8TC21 504 aa2.98□□□□□ -1.93
SQLE-204ENST00000520493 DUS3LQ96G46 650 aaKnown RBP2.98□□□□□ -1.93
SQLE-204ENST00000520493 ZNF414Q96IQ9 312 aa2.98□□□□□ -1.93
SQLE-204ENST00000520493 ZNF184Q99676 751 aaPredicted RBP2.98□□□□□ -1.93
SQLE-204ENST00000520493 SLC7A5P2Q9GIP4 190 aa2.98□□□□□ -1.93
SQLE-204ENST00000520493 DEFB129Q9H1M3 183 aa2.98□□□□□ -1.93
SQLE-204ENST00000520493 CD209Q9NNX6 404 aa2.98□□□□□ -1.93
SQLE-204ENST00000520493 VNN3Q9NY84 501 aa2.98□□□□□ -1.93
SQLE-204ENST00000520493 TREM2Q9NZC2 230 aa2.98□□□□□ -1.93
SQLE-204ENST00000520493 CHMP5Q9NZZ3 219 aa2.98□□□□□ -1.93
SQLE-204ENST00000520493 ZNF282Q9UDV7 671 aaPredicted RBP2.98□□□□□ -1.93
SQLE-204ENST00000520493 GOLT1BQ9Y3E0 138 aa2.98□□□□□ -1.93
SQLE-204ENST00000520493 UGT2A1Q9Y4X1 527 aa2.98□□□□□ -1.93
SQLE-204ENST00000520493 CNTNAP1P78357 1384 aa2.98□□□□□ -1.93
SQLE-204ENST00000520493 ADGRA3Q8IWK6 1321 aa2.97□□□□□ -1.93
SQLE-204ENST00000520493 OR6C74A6NCV1 312 aa2.97□□□□□ -1.93
SQLE-204ENST00000520493 A6NIZ1 184 aa2.97□□□□□ -1.93
SQLE-204ENST00000520493 PDZK1P1A8MUH7 402 aa2.97□□□□□ -1.93
SQLE-204ENST00000520493 PHOX2AO14813 284 aa2.97□□□□□ -1.93
SQLE-204ENST00000520493 XRCC2O43543 280 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms