RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 SPHARQ15513 63 aa-2.31□□□□□ -2.78
SNORA40.16-201ENST00000517238 SPIN4Q56A73 249 aa-2.31□□□□□ -2.78
SNORA40.16-201ENST00000517238 SOHLH1Q5JUK2 328 aa-2.31□□□□□ -2.78
SNORA40.16-201ENST00000517238 PVRIGQ6DKI7 326 aa-2.31□□□□□ -2.78
SNORA40.16-201ENST00000517238 NOXRED1Q6NXP6 359 aa-2.31□□□□□ -2.78
SNORA40.16-201ENST00000517238 FAM199XQ6PEV8 388 aaPredicted RBP-2.31□□□□□ -2.78
SNORA40.16-201ENST00000517238 C1orf228Q6PIY5 440 aa-2.31□□□□□ -2.78
SNORA40.16-201ENST00000517238 C16orf54Q6UWD8 224 aa-2.31□□□□□ -2.78
SNORA40.16-201ENST00000517238 BTNL8Q6UX41 500 aa-2.31□□□□□ -2.78
SNORA40.16-201ENST00000517238 SLC16A14Q7RTX9 510 aa-2.31□□□□□ -2.78
SNORA40.16-201ENST00000517238 COMTD1Q86VU5 262 aa-2.31□□□□□ -2.78
SNORA40.16-201ENST00000517238 DIS3L2Q8IYB7 885 aaKnown RBP-2.31□□□□□ -2.78
SNORA40.16-201ENST00000517238 CLECL1Q8IZS7 167 aa-2.31□□□□□ -2.78
SNORA40.16-201ENST00000517238 MCUQ8NE86 351 aa-2.31□□□□□ -2.78
SNORA40.16-201ENST00000517238 PAQR8Q8TEZ7 354 aa-2.31□□□□□ -2.78
SNORA40.16-201ENST00000517238 HEXDCQ8WVB3 486 aa-2.31□□□□□ -2.78
SNORA40.16-201ENST00000517238 GEMIN6Q8WXD5 167 aaKnown RBP-2.31□□□□□ -2.78
SNORA40.16-201ENST00000517238 DLX4Q92988 240 aaPredicted RBP-2.31□□□□□ -2.78
SNORA40.16-201ENST00000517238 EEF1AKMT3Q96AZ1 226 aa-2.31□□□□□ -2.78
SNORA40.16-201ENST00000517238 APH1AQ96BI3 265 aa-2.31□□□□□ -2.78
SNORA40.16-201ENST00000517238 UPRTQ96BW1 309 aa-2.31□□□□□ -2.78
SNORA40.16-201ENST00000517238 MRPS24Q96EL2 167 aaKnown RBP-2.31□□□□□ -2.78
SNORA40.16-201ENST00000517238 PRRC1Q96M27 445 aa-2.31□□□□□ -2.78
SNORA40.16-201ENST00000517238 SPATA33Q96N06 139 aa-2.31□□□□□ -2.78
SNORA40.16-201ENST00000517238 LRRC3BQ96PB8 259 aa-2.31□□□□□ -2.78
SNORA40.16-201ENST00000517238 RBM14Q96PK6 669 aaKnown RBP-2.31□□□□□ -2.78
SNORA40.16-201ENST00000517238 TIMM17AQ99595 171 aa-2.31□□□□□ -2.78
SNORA40.16-201ENST00000517238 SLC25A2Q9BXI2 301 aa-2.31□□□□□ -2.78
SNORA40.16-201ENST00000517238 GABARAPL3Q9BY60 117 aa-2.31□□□□□ -2.78
SNORA40.16-201ENST00000517238 PPDPFQ9H3Y8 114 aa-2.31□□□□□ -2.78
SNORA40.16-201ENST00000517238 SMYD3Q9H7B4 428 aa-2.31□□□□□ -2.78
SNORA40.16-201ENST00000517238 PROK2Q9HC23 129 aa-2.31□□□□□ -2.78
SNORA40.16-201ENST00000517238 GLRX2Q9NS18 164 aa-2.31□□□□□ -2.78
SNORA40.16-201ENST00000517238 P2RX2Q9UBL9 471 aa-2.31□□□□□ -2.78
SNORA40.16-201ENST00000517238 PCSK1NQ9UHG2 260 aa-2.31□□□□□ -2.78
SNORA40.16-201ENST00000517238 SLC7A8Q9UHI5 535 aa-2.31□□□□□ -2.78
SNORA40.16-201ENST00000517238 SPTBN4Q9H254 2564 aa-2.31□□□□□ -2.78
SNORA40.16-201ENST00000517238 PEAK1Q9H792 1746 aa-2.31□□□□□ -2.78
SNORA40.16-201ENST00000517238 LCTP09848 1927 aa-2.32□□□□□ -2.78
SNORA40.16-201ENST00000517238 AK9Q5TCS8 1911 aa-2.32□□□□□ -2.78
SNORA40.16-201ENST00000517238 LOC102724200A0A096LPH7 203 aaPredicted RBP-2.32□□□□□ -2.78
SNORA40.16-201ENST00000517238 GOLGA6CA6NDK9 693 aa-2.32□□□□□ -2.78
SNORA40.16-201ENST00000517238 GOLGA6BA6NDN3 693 aa-2.32□□□□□ -2.78
SNORA40.16-201ENST00000517238 OR5H1A6NKK0 313 aa-2.32□□□□□ -2.78
SNORA40.16-201ENST00000517238 NPIPA7E9PJI5 369 aa-2.32□□□□□ -2.78
SNORA40.16-201ENST00000517238 TIMM17BO60830 172 aa-2.32□□□□□ -2.78
SNORA40.16-201ENST00000517238 REM1O75628 298 aa-2.32□□□□□ -2.78
SNORA40.16-201ENST00000517238 IGHV3-11P01762 117 aa-2.32□□□□□ -2.78
SNORA40.16-201ENST00000517238 CLTBP09497 229 aa-2.32□□□□□ -2.78
SNORA40.16-201ENST00000517238 NPIPA8P0DM63 369 aa-2.32□□□□□ -2.78
SNORA40.16-201ENST00000517238 SERPINA2P20848 420 aa-2.32□□□□□ -2.78
SNORA40.16-201ENST00000517238 EEF1B2P24534 225 aaKnown RBP-2.32□□□□□ -2.78
SNORA40.16-201ENST00000517238 TSPAN7P41732 249 aa-2.32□□□□□ -2.78
SNORA40.16-201ENST00000517238 GNPDA1P46926 289 aa-2.32□□□□□ -2.78
SNORA40.16-201ENST00000517238 MFAP4P55083 255 aa-2.32□□□□□ -2.78
SNORA40.16-201ENST00000517238 CMC4P56277 68 aaPredicted RBP-2.32□□□□□ -2.78
SNORA40.16-201ENST00000517238 PRAMEP78395 509 aa-2.32□□□□□ -2.78
SNORA40.16-201ENST00000517238 TSTA3Q13630 321 aaPredicted RBP-2.32□□□□□ -2.78
SNORA40.16-201ENST00000517238 PRPSAP1Q14558 356 aa-2.32□□□□□ -2.78
SNORA40.16-201ENST00000517238 PON2Q15165 354 aa-2.32□□□□□ -2.78
SNORA40.16-201ENST00000517238 PSG3Q16557 428 aa-2.32□□□□□ -2.78
SNORA40.16-201ENST00000517238 BAK1Q16611 211 aa-2.32□□□□□ -2.78
SNORA40.16-201ENST00000517238 NDUFAF6Q330K2 333 aa-2.32□□□□□ -2.78
SNORA40.16-201ENST00000517238 GFOD2Q3B7J2 385 aa-2.32□□□□□ -2.78
SNORA40.16-201ENST00000517238 NSUN5P1Q3KNT7 163 aa-2.32□□□□□ -2.78
SNORA40.16-201ENST00000517238 LUZP6Q538Z0 58 aa-2.32□□□□□ -2.78
SNORA40.16-201ENST00000517238 Q6ZQT7 251 aa-2.32□□□□□ -2.78
SNORA40.16-201ENST00000517238 C2orf91Q6ZV80 131 aa-2.32□□□□□ -2.78
SNORA40.16-201ENST00000517238 FA2HQ7L5A8 372 aa-2.32□□□□□ -2.78
SNORA40.16-201ENST00000517238 NRARPQ7Z6K4 114 aa-2.32□□□□□ -2.78
SNORA40.16-201ENST00000517238 TLK2Q86UE8 772 aa-2.32□□□□□ -2.78
SNORA40.16-201ENST00000517238 IQCA1Q86XH1 822 aa-2.32□□□□□ -2.78
SNORA40.16-201ENST00000517238 BBS7Q8IWZ6 715 aa-2.32□□□□□ -2.78
SNORA40.16-201ENST00000517238 LINC00471Q8N535 108 aa-2.32□□□□□ -2.78
SNORA40.16-201ENST00000517238 SLC4A11Q8NBS3 891 aa-2.32□□□□□ -2.78
SNORA40.16-201ENST00000517238 OR5T3Q8NGG3 340 aa-2.32□□□□□ -2.78
SNORA40.16-201ENST00000517238 MFSD8Q8NHS3 518 aa-2.32□□□□□ -2.78
SNORA40.16-201ENST00000517238 SPATA18Q8TC71 538 aa-2.32□□□□□ -2.78
SNORA40.16-201ENST00000517238 CORO2AQ92828 525 aa-2.32□□□□□ -2.78
SNORA40.16-201ENST00000517238 PTX4Q96A99 478 aa-2.32□□□□□ -2.78
SNORA40.16-201ENST00000517238 PGAM5Q96HS1 289 aa-2.32□□□□□ -2.78
SNORA40.16-201ENST00000517238 BTN2A3PQ96KV6 586 aa-2.32□□□□□ -2.78
SNORA40.16-201ENST00000517238 S1PR3Q99500 378 aa-2.32□□□□□ -2.78
SNORA40.16-201ENST00000517238 PYM1Q9BRP8 204 aaKnown RBP-2.32□□□□□ -2.78
SNORA40.16-201ENST00000517238 POTEKPQ9BYX7 375 aa-2.32□□□□□ -2.78
SNORA40.16-201ENST00000517238 ZNF436Q9C0F3 470 aaPredicted RBP-2.32□□□□□ -2.78
SNORA40.16-201ENST00000517238 SLC26A1Q9H2B4 701 aa-2.32□□□□□ -2.78
SNORA40.16-201ENST00000517238 LRRN3Q9H3W5 708 aa-2.32□□□□□ -2.78
SNORA40.16-201ENST00000517238 GPN2Q9H9Y4 310 aaPredicted RBP-2.32□□□□□ -2.78
SNORA40.16-201ENST00000517238 SMOXQ9NWM0 555 aa-2.32□□□□□ -2.78
SNORA40.16-201ENST00000517238 GOLGA6AQ9NYA3 693 aa-2.32□□□□□ -2.78
SNORA40.16-201ENST00000517238 SH3BGRL2Q9UJC5 107 aa-2.32□□□□□ -2.78
SNORA40.16-201ENST00000517238 MEMO1Q9Y316 297 aa-2.32□□□□□ -2.78
SNORA40.16-201ENST00000517238 LOC285556D6RIA3 1793 aa-2.33□□□□□ -2.78
SNORA40.16-201ENST00000517238 KDRP35968 1356 aa-2.33□□□□□ -2.78
SNORA40.16-201ENST00000517238 LAMA3Q16787 3333 aa-2.33□□□□□ -2.78
SNORA40.16-201ENST00000517238 USP42Q9H9J4 1324 aaKnown RBP-2.33□□□□□ -2.78
SNORA40.16-201ENST00000517238 IGHV3-72A0A0B4J1Y9 119 aa-2.33□□□□□ -2.78
SNORA40.16-201ENST00000517238 A0A0J9YX75 114 aa-2.33□□□□□ -2.78
SNORA40.16-201ENST00000517238 ANKDD1BA6NHY2 528 aa-2.33□□□□□ -2.78
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms