RNA–Protein interactions for RNA: ENST00000516816.1

RNU1-40P-201, Transcript of RNA, U1 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU1-40P, Length 164 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-40P-201ENST00000516816 SOX2P48431 317 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 HOXA1P49639 335 aaPredicted RBP1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 CSNK1EP49674 416 aaKnown RBP1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 VEGFCP49767 419 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 RAB5CP51148 216 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 P2RX1P51575 399 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 ZNF41P51814 821 aaPredicted RBP1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 AKR1D1P51857 326 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 PGDP52209 483 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 ZNF136P52737 540 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 HCCSP53701 268 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 GAS1P54826 345 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 CLRN1P58418 232 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 TAS2R46P59540 309 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 TAS2R20P59543 309 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 CD81P60033 236 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 GPR85P60893 370 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 RAB1AP62820 205 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 ERVK-25P63136 954 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 NTHL1P78549 312 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 HTRA4P83105 476 aaPredicted RBP1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 RPL19P84098 196 aaKnown RBP1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 DGCR2P98153 550 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 HOXC5Q00444 222 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 SORDQ00796 357 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 MC2RQ01718 297 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 NAAAQ02083 359 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 DHODHQ02127 395 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 HHEXQ03014 270 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 ZNF85Q03923 595 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 PLA2G7Q13093 441 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 MADCAM1Q13477 382 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 SNTB1Q13884 538 aaKnown RBP1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 KLF9Q13886 244 aaPredicted RBP1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 EIF2B1Q14232 305 aaKnown RBP1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 RBM39Q14498 530 aaKnown RBP1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 SLC17A1Q14916 467 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 UBXN2BQ14CS0 331 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 EXOSC7Q15024 291 aaKnown RBP1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 RSU1Q15404 277 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 PNLIPRP3Q17RR3 467 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 CPEB4Q17RY0 729 aaKnown RBP eCLIP1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 SLC25A35Q3KQZ1 300 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 CHRFAM7AQ494W8 412 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 ABCA11PQ4W5N1 156 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 SMUG1Q53HV7 270 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 C2orf27AQ580R0 203 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 TMEM128Q5BJH2 165 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 ARSJQ5FYB0 599 aaPredicted RBP1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 VWA2Q5GFL6 755 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 TOR2AQ5JU69 321 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 FAM78AQ5JUQ0 283 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 THEM4Q5T1C6 240 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 PDSS1Q5T2R2 415 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 AVPI1Q5T686 147 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 PHF19Q5T6S3 580 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 PRAMEF17Q5VTA0 474 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 LIPNQ5VXI9 398 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 ZNF425Q6IV72 752 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 RGS7BPQ6MZT1 257 aaPredicted RBP1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 PWWP2BQ6NUJ5 590 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 C3orf33Q6P1S2 294 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 FDX2Q6P4F2 183 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 C16orf54Q6UWD8 224 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 ALKAL2Q6UX46 152 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 LINC00114Q6XXX2 140 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 TMEM184AQ6ZMB5 413 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 IL34Q6ZMJ4 242 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 Q6ZSR6 202 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 Q6ZTK2 550 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 HIST2H3AQ71DI3 136 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 MED25Q71SY5 747 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 H1FNTQ75WM6 255 aaPredicted RBP1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 KCTD9Q7L273 389 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 RAB11FIP2Q7L804 512 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 FAM122BQ7Z309 247 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 MDGA2Q7Z553 956 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 TMED4Q7Z7H5 227 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 CD163Q86VB7 1156 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 WDR5BQ86VZ2 330 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 COMMD2Q86X83 199 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 ANGPTL5Q86XS5 388 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 PLXDC1Q8IUK5 500 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 BAP18Q8IXM2 172 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 CARFQ8N187 725 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 GABRG1Q8N1C3 465 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 CA13Q8N1Q1 262 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 GALNT16Q8N428 558 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 SLC22A24Q8N4F4 322 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 KCNRGQ8N5I3 272 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 SIRT6Q8N6T7 355 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 TMEM99Q8N816 258 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 BCORP1Q8N888 145 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 CYB561A3Q8NBI2 242 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 ZNF485Q8NCK3 441 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 BVESQ8NE79 360 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 LFNGQ8NES3 379 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 SDR9C7Q8NEX9 313 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 BBS1Q8NFJ9 593 aa1.88□□□□□ -2.11
RNU1-40P-201ENST00000516816 OR11H7Q8NGC8 314 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms