RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 ADIPOR1Q96A54 375 aa-2.46□□□□□ -2.8
RNU6-539P-201ENST00000516665 TIMM17AQ99595 171 aa-2.46□□□□□ -2.8
RNU6-539P-201ENST00000516665 GGTLC1Q9BX51 225 aa-2.46□□□□□ -2.8
RNU6-539P-201ENST00000516665 TMEM59Q9BXS4 323 aa-2.46□□□□□ -2.8
RNU6-539P-201ENST00000516665 GANQ9H2C0 597 aa-2.46□□□□□ -2.8
RNU6-539P-201ENST00000516665 AGPAT4Q9NRZ5 378 aa-2.46□□□□□ -2.8
RNU6-539P-201ENST00000516665 SPATA7Q9P0W8 599 aa-2.46□□□□□ -2.8
RNU6-539P-201ENST00000516665 RWDD2AQ9UIY3 292 aa-2.46□□□□□ -2.8
RNU6-539P-201ENST00000516665 ANAPC2Q9UJX6 822 aa-2.46□□□□□ -2.8
RNU6-539P-201ENST00000516665 PPIEQ9UNP9 301 aaKnown RBP-2.46□□□□□ -2.8
RNU6-539P-201ENST00000516665 EXPH5Q8NEV8 1989 aa-2.47□□□□□ -2.8
RNU6-539P-201ENST00000516665 LAMA2P24043 3122 aaKnown RBP-2.47□□□□□ -2.8
RNU6-539P-201ENST00000516665 ATP10DQ9P241 1426 aa-2.47□□□□□ -2.8
RNU6-539P-201ENST00000516665 NSG1A0A0A6YYJ2 146 aa-2.47□□□□□ -2.8
RNU6-539P-201ENST00000516665 TCRBV21S2A2A0A5A6 115 aa-2.47□□□□□ -2.8
RNU6-539P-201ENST00000516665 OR5H1A6NKK0 313 aa-2.47□□□□□ -2.8
RNU6-539P-201ENST00000516665 FAM86B1E9PN63 330 aa-2.47□□□□□ -2.8
RNU6-539P-201ENST00000516665 DCTN6O00399 190 aa-2.47□□□□□ -2.8
RNU6-539P-201ENST00000516665 PLPP3O14495 311 aa-2.47□□□□□ -2.8
RNU6-539P-201ENST00000516665 STAMBPO95630 424 aa-2.47□□□□□ -2.8
RNU6-539P-201ENST00000516665 HSPA4LO95757 839 aa-2.47□□□□□ -2.8
RNU6-539P-201ENST00000516665 IGHV3-11P01762 117 aa-2.47□□□□□ -2.8
RNU6-539P-201ENST00000516665 GAPDHP04406 335 aaKnown RBP-2.47□□□□□ -2.8
RNU6-539P-201ENST00000516665 FAM86B2P0C5J1 330 aa-2.47□□□□□ -2.8
RNU6-539P-201ENST00000516665 BCKDHAP12694 445 aa-2.47□□□□□ -2.8
RNU6-539P-201ENST00000516665 SCG2P13521 617 aa-2.47□□□□□ -2.8
RNU6-539P-201ENST00000516665 NPY2RP49146 381 aa-2.47□□□□□ -2.8
RNU6-539P-201ENST00000516665 ACADVLP49748 655 aa-2.47□□□□□ -2.8
RNU6-539P-201ENST00000516665 CRYBB1P53674 252 aaPredicted RBP-2.47□□□□□ -2.8
RNU6-539P-201ENST00000516665 DHRS2Q13268 280 aa-2.47□□□□□ -2.8
RNU6-539P-201ENST00000516665 AQP6Q13520 282 aa-2.47□□□□□ -2.8
RNU6-539P-201ENST00000516665 CUL1Q13616 776 aa-2.47□□□□□ -2.8
RNU6-539P-201ENST00000516665 LDLRAP1Q5SW96 308 aa-2.47□□□□□ -2.8
RNU6-539P-201ENST00000516665 BEND3Q5T5X7 828 aa-2.47□□□□□ -2.8
RNU6-539P-201ENST00000516665 PLET1Q6UQ28 207 aa-2.47□□□□□ -2.8
RNU6-539P-201ENST00000516665 OR2Z1Q8NG97 314 aa-2.47□□□□□ -2.8
RNU6-539P-201ENST00000516665 OR5D13Q8NGL4 314 aa-2.47□□□□□ -2.8
RNU6-539P-201ENST00000516665 OR4X1Q8NH49 305 aa-2.47□□□□□ -2.8
RNU6-539P-201ENST00000516665 OR8K3Q8NH51 312 aa-2.47□□□□□ -2.8
RNU6-539P-201ENST00000516665 C8orf48Q96LL4 319 aa-2.47□□□□□ -2.8
RNU6-539P-201ENST00000516665 RMDN2Q96LZ7 410 aa-2.47□□□□□ -2.8
RNU6-539P-201ENST00000516665 OR5B2Q96R09 309 aa-2.47□□□□□ -2.8
RNU6-539P-201ENST00000516665 TEX12Q9BXU0 123 aa-2.47□□□□□ -2.8
RNU6-539P-201ENST00000516665 AICDAQ9GZX7 198 aa-2.47□□□□□ -2.8
RNU6-539P-201ENST00000516665 PORCNQ9H237 461 aa-2.47□□□□□ -2.8
RNU6-539P-201ENST00000516665 NOL12Q9UGY1 213 aaKnown RBP eCLIP-2.47□□□□□ -2.8
RNU6-539P-201ENST00000516665 HYOU1Q9Y4L1 999 aa-2.47□□□□□ -2.8
RNU6-539P-201ENST00000516665 FKBP7Q9Y680 259 aa-2.47□□□□□ -2.8
RNU6-539P-201ENST00000516665 ATAD5Q96QE3 1844 aa-2.47□□□□□ -2.81
RNU6-539P-201ENST00000516665 NUP205Q92621 2012 aa-2.47□□□□□ -2.81
RNU6-539P-201ENST00000516665 ZNF729A6NN14 1252 aaPredicted RBP-2.48□□□□□ -2.81
RNU6-539P-201ENST00000516665 ENTPD6O75354 484 aa-2.48□□□□□ -2.81
RNU6-539P-201ENST00000516665 SCGB1D1O95968 90 aa-2.48□□□□□ -2.81
RNU6-539P-201ENST00000516665 ABCB1P08183 1280 aaPredicted RBP-2.48□□□□□ -2.81
RNU6-539P-201ENST00000516665 KDELR1P24390 212 aa-2.48□□□□□ -2.81
RNU6-539P-201ENST00000516665 HCAR3P49019 387 aa-2.48□□□□□ -2.81
RNU6-539P-201ENST00000516665 ZNF138P52744 262 aa-2.48□□□□□ -2.81
RNU6-539P-201ENST00000516665 DCAF7P61962 342 aa-2.48□□□□□ -2.81
RNU6-539P-201ENST00000516665 SETQ01105 290 aaPredicted RBP-2.48□□□□□ -2.81
RNU6-539P-201ENST00000516665 AKAP17AQ02040 695 aaKnown RBP-2.48□□□□□ -2.81
RNU6-539P-201ENST00000516665 STX1AQ16623 288 aa-2.48□□□□□ -2.81
RNU6-539P-201ENST00000516665 HAUS3Q68CZ6 603 aa-2.48□□□□□ -2.81
RNU6-539P-201ENST00000516665 KRTAP26-1Q6PEX3 210 aa-2.48□□□□□ -2.81
RNU6-539P-201ENST00000516665 CCDC137Q6PK04 289 aaKnown RBP-2.48□□□□□ -2.81
RNU6-539P-201ENST00000516665 FA2HQ7L5A8 372 aa-2.48□□□□□ -2.81
RNU6-539P-201ENST00000516665 SMAP1Q8IYB5 467 aaPredicted RBP-2.48□□□□□ -2.81
RNU6-539P-201ENST00000516665 CHST4Q8NCG5 386 aa-2.48□□□□□ -2.81
RNU6-539P-201ENST00000516665 VN1R2Q8NFZ6 395 aa-2.48□□□□□ -2.81
RNU6-539P-201ENST00000516665 OR4C16Q8NGL9 310 aa-2.48□□□□□ -2.81
RNU6-539P-201ENST00000516665 RAPGEF5Q92565 580 aa-2.48□□□□□ -2.81
RNU6-539P-201ENST00000516665 ZNF707Q96C28 371 aaPredicted RBP-2.48□□□□□ -2.81
RNU6-539P-201ENST00000516665 CMTM7Q96FZ5 175 aa-2.48□□□□□ -2.81
RNU6-539P-201ENST00000516665 FAHD2AQ96GK7 314 aa-2.48□□□□□ -2.81
RNU6-539P-201ENST00000516665 MRPL57Q9BQC6 102 aaKnown RBP-2.48□□□□□ -2.81
RNU6-539P-201ENST00000516665 SDF4Q9BRK5 362 aa-2.48□□□□□ -2.81
RNU6-539P-201ENST00000516665 TMEM70Q9BUB7 260 aa-2.48□□□□□ -2.81
RNU6-539P-201ENST00000516665 PPCSQ9HAB8 311 aa-2.48□□□□□ -2.81
RNU6-539P-201ENST00000516665 IL26Q9NPH9 171 aa-2.48□□□□□ -2.81
RNU6-539P-201ENST00000516665 MIOXQ9UGB7 285 aa-2.48□□□□□ -2.81
RNU6-539P-201ENST00000516665 GPR132Q9UNW8 380 aa-2.48□□□□□ -2.81
RNU6-539P-201ENST00000516665 CHD3Q12873 2000 aaKnown RBP-2.48□□□□□ -2.81
RNU6-539P-201ENST00000516665 C5orf51A6NDU8 294 aa-2.49□□□□□ -2.81
RNU6-539P-201ENST00000516665 C17orf98A8MV24 154 aa-2.49□□□□□ -2.81
RNU6-539P-201ENST00000516665 NPIPA7E9PJI5 369 aa-2.49□□□□□ -2.81
RNU6-539P-201ENST00000516665 CASKO14936 926 aa-2.49□□□□□ -2.81
RNU6-539P-201ENST00000516665 CTDSPLO15194 276 aa-2.49□□□□□ -2.81
RNU6-539P-201ENST00000516665 PLIN3O60664 434 aa-2.49□□□□□ -2.81
RNU6-539P-201ENST00000516665 STK17BO94768 372 aa-2.49□□□□□ -2.81
RNU6-539P-201ENST00000516665 KCNK2O95069 426 aa-2.49□□□□□ -2.81
RNU6-539P-201ENST00000516665 IGHV1-46P01743 117 aa-2.49□□□□□ -2.81
RNU6-539P-201ENST00000516665 NPIPA8P0DM63 369 aa-2.49□□□□□ -2.81
RNU6-539P-201ENST00000516665 SAT1P21673 171 aa-2.49□□□□□ -2.81
RNU6-539P-201ENST00000516665 CMA1P23946 247 aa-2.49□□□□□ -2.81
RNU6-539P-201ENST00000516665 HERV-K104P63124 156 aa-2.49□□□□□ -2.81
RNU6-539P-201ENST00000516665 CCNA1P78396 465 aa-2.49□□□□□ -2.81
RNU6-539P-201ENST00000516665 ASB16-AS1Q495Z4 193 aa-2.49□□□□□ -2.81
RNU6-539P-201ENST00000516665 ORMDL2Q53FV1 153 aa-2.49□□□□□ -2.81
RNU6-539P-201ENST00000516665 C1orf141Q5JVX7 400 aa-2.49□□□□□ -2.81
RNU6-539P-201ENST00000516665 SPECC1LQ69YQ0 1117 aa-2.49□□□□□ -2.81
RNU6-539P-201ENST00000516665 NEK5Q6P3R8 708 aa-2.49□□□□□ -2.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms