RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 MPGP29372 298 aa18.48■□□□□ 0.55
LSM6-207ENST00000515311 ZNF691Q5VV52 312 aa18.48■□□□□ 0.55
LSM6-207ENST00000515311 LUZP2Q86TE4 346 aa18.48■□□□□ 0.55
LSM6-207ENST00000515311 ZBTB46Q86UZ6 589 aa18.48■□□□□ 0.55
LSM6-207ENST00000515311 TCEANCQ8N8B7 351 aa18.48■□□□□ 0.55
LSM6-207ENST00000515311 OR2T4Q8NH00 348 aa18.48■□□□□ 0.55
LSM6-207ENST00000515311 ZNF184Q99676 751 aaPredicted RBP18.48■□□□□ 0.55
LSM6-207ENST00000515311 NUAK2Q9H093 628 aa18.48■□□□□ 0.55
LSM6-207ENST00000515311 HINT3Q9NQE9 182 aaKnown RBP18.48■□□□□ 0.55
LSM6-207ENST00000515311 TAS2R16Q9NYV7 291 aa18.48■□□□□ 0.55
LSM6-207ENST00000515311 IGLV1-36A0A0B4J1U3 117 aa18.47■□□□□ 0.55
LSM6-207ENST00000515311 WIPF3A6NGB9 483 aa18.47■□□□□ 0.55
LSM6-207ENST00000515311 M0R129 80 aa18.47■□□□□ 0.55
LSM6-207ENST00000515311 TLX2O43763 284 aaPredicted RBP18.47■□□□□ 0.55
LSM6-207ENST00000515311 MPZL2O60487 215 aa18.47■□□□□ 0.55
LSM6-207ENST00000515311 SLC16A7O60669 478 aa18.47■□□□□ 0.55
LSM6-207ENST00000515311 ZNF84P51523 738 aa18.47■□□□□ 0.55
LSM6-207ENST00000515311 SNRPGP62308 76 aaKnown RBP18.47■□□□□ 0.55
LSM6-207ENST00000515311 CEACAM16Q2WEN9 425 aa18.47■□□□□ 0.55
LSM6-207ENST00000515311 PLBD1Q6P4A8 553 aa18.47■□□□□ 0.55
LSM6-207ENST00000515311 CXXC5Q7LFL8 322 aaKnown RBP18.47■□□□□ 0.55
LSM6-207ENST00000515311 CPOQ8IVL8 374 aa18.47■□□□□ 0.55
LSM6-207ENST00000515311 OR6V1Q8N148 313 aa18.47■□□□□ 0.55
LSM6-207ENST00000515311 FAM26EQ8N5C1 309 aa18.47■□□□□ 0.55
LSM6-207ENST00000515311 SETD9Q8NE22 299 aa18.47■□□□□ 0.55
LSM6-207ENST00000515311 PTP4A1Q93096 173 aa18.47■□□□□ 0.55
LSM6-207ENST00000515311 RACGAP1Q9H0H5 632 aa18.47■□□□□ 0.55
LSM6-207ENST00000515311 IGKV1D-43A0A0B4J1Z2 117 aa18.46■□□□□ 0.55
LSM6-207ENST00000515311 FAM183AA6NL82 134 aa18.46■□□□□ 0.55
LSM6-207ENST00000515311 ZNF99A8MXY4 864 aaPredicted RBP18.46■□□□□ 0.55
LSM6-207ENST00000515311 DCTN6O00399 190 aa18.46■□□□□ 0.55
LSM6-207ENST00000515311 PRODHO43272 600 aa18.46■□□□□ 0.55
LSM6-207ENST00000515311 KHDRBS3O75525 346 aaKnown RBP18.46■□□□□ 0.55
LSM6-207ENST00000515311 ITGA5P08648 1049 aa18.46■□□□□ 0.55
LSM6-207ENST00000515311 IGHV1-2P23083 117 aa18.46■□□□□ 0.55
LSM6-207ENST00000515311 TGFBR3Q03167 851 aa18.46■□□□□ 0.55
LSM6-207ENST00000515311 SLC25A30Q5SVS4 291 aa18.46■□□□□ 0.55
LSM6-207ENST00000515311 C6orf52Q5T4I8 152 aa18.46■□□□□ 0.55
LSM6-207ENST00000515311 USP51Q70EK9 711 aa18.46■□□□□ 0.55
LSM6-207ENST00000515311 ZNF627Q7L945 461 aa18.46■□□□□ 0.55
LSM6-207ENST00000515311 C1orf162Q8NEQ5 155 aaPredicted RBP18.46■□□□□ 0.55
LSM6-207ENST00000515311 ZNF837Q96EG3 531 aaPredicted RBP18.46■□□□□ 0.55
LSM6-207ENST00000515311 TSSK2Q96PF2 358 aa18.46■□□□□ 0.55
LSM6-207ENST00000515311 IL4I1Q96RQ9 567 aa18.46■□□□□ 0.55
LSM6-207ENST00000515311 RBM24Q9BX46 236 aaKnown RBP18.46■□□□□ 0.55
LSM6-207ENST00000515311 HCAR1Q9BXC0 346 aa18.46■□□□□ 0.55
LSM6-207ENST00000515311 KCNJ16Q9NPI9 418 aa18.46■□□□□ 0.55
LSM6-207ENST00000515311 ZNF226Q9NYT6 803 aa18.46■□□□□ 0.55
LSM6-207ENST00000515311 RAB26Q9ULW5 256 aa18.46■□□□□ 0.55
LSM6-207ENST00000515311 B9D1Q9UPM9 204 aa18.46■□□□□ 0.55
LSM6-207ENST00000515311 UGT2A1Q9Y4X1 527 aa18.46■□□□□ 0.55
LSM6-207ENST00000515311 HSPE1-MOB4S4R3N1 261 aa18.46■□□□□ 0.55
LSM6-207ENST00000515311 USP9XQ93008 2570 aaPredicted RBP18.45■□□□□ 0.54
LSM6-207ENST00000515311 FAM90A27PA6NNH2 459 aa18.45■□□□□ 0.54
LSM6-207ENST00000515311 CLDN14O95500 239 aa18.45■□□□□ 0.54
LSM6-207ENST00000515311 GNAO1P09471 354 aa18.45■□□□□ 0.54
LSM6-207ENST00000515311 SPI1P17947 270 aa18.45■□□□□ 0.54
LSM6-207ENST00000515311 PSMB1P20618 241 aaKnown RBP18.45■□□□□ 0.54
LSM6-207ENST00000515311 CD79BP40259 229 aa18.45■□□□□ 0.54
LSM6-207ENST00000515311 NRN1LQ496H8 165 aa18.45■□□□□ 0.54
LSM6-207ENST00000515311 FOXL2NBQ6ZUU3 175 aa18.45■□□□□ 0.54
LSM6-207ENST00000515311 CXorf67Q86X51 503 aaPredicted RBP18.45■□□□□ 0.54
LSM6-207ENST00000515311 GLB1L2Q8IW92 636 aa18.45■□□□□ 0.54
LSM6-207ENST00000515311 ENTHD1Q8IYW4 607 aa18.45■□□□□ 0.54
LSM6-207ENST00000515311 ZNF433Q8N7K0 673 aaPredicted RBP18.45■□□□□ 0.54
LSM6-207ENST00000515311 OR9Q1Q8NGQ5 310 aa18.45■□□□□ 0.54
LSM6-207ENST00000515311 RHOXF1Q8NHV9 184 aa18.45■□□□□ 0.54
LSM6-207ENST00000515311 NSMAFQ92636 917 aa18.45■□□□□ 0.54
LSM6-207ENST00000515311 OTULINQ96BN8 352 aa18.45■□□□□ 0.54
LSM6-207ENST00000515311 LRRC46Q96FV0 321 aa18.45■□□□□ 0.54
LSM6-207ENST00000515311 BOD1Q96IK1 185 aa18.45■□□□□ 0.54
LSM6-207ENST00000515311 MUS81Q96NY9 551 aa18.45■□□□□ 0.54
LSM6-207ENST00000515311 HDHD5Q9BXW7 423 aa18.45■□□□□ 0.54
LSM6-207ENST00000515311 MED20Q9H944 212 aa18.45■□□□□ 0.54
LSM6-207ENST00000515311 SRA1Q9HD15 236 aaKnown RBP18.45■□□□□ 0.54
LSM6-207ENST00000515311 GALNT8Q9NY28 637 aa18.45■□□□□ 0.54
LSM6-207ENST00000515311 DOPEY1Q5JWR5 2465 aa18.44■□□□□ 0.54
LSM6-207ENST00000515311 CLEC18AA5D8T8 446 aa18.44■□□□□ 0.54
LSM6-207ENST00000515311 AGFG2O95081 481 aa18.44■□□□□ 0.54
LSM6-207ENST00000515311 CLIC3O95833 236 aa18.44■□□□□ 0.54
LSM6-207ENST00000515311 GABRB1P18505 474 aa18.44■□□□□ 0.54
LSM6-207ENST00000515311 SLC2A5P22732 501 aa18.44■□□□□ 0.54
LSM6-207ENST00000515311 CENPAP49450 140 aa18.44■□□□□ 0.54
LSM6-207ENST00000515311 FOXG1P55316 489 aaPredicted RBP18.44■□□□□ 0.54
LSM6-207ENST00000515311 MRPS34P82930 218 aaKnown RBP18.44■□□□□ 0.54
LSM6-207ENST00000515311 GLO1Q04760 184 aa18.44■□□□□ 0.54
LSM6-207ENST00000515311 CDSNQ15517 529 aa18.44■□□□□ 0.54
LSM6-207ENST00000515311 SFRP5Q5T4F7 317 aa18.44■□□□□ 0.54
LSM6-207ENST00000515311 AADACL4Q5VUY2 407 aa18.44■□□□□ 0.54
LSM6-207ENST00000515311 NXNL2Q5VZ03 156 aa18.44■□□□□ 0.54
LSM6-207ENST00000515311 CLEC18BQ6UXF7 455 aa18.44■□□□□ 0.54
LSM6-207ENST00000515311 STAC2Q6ZMT1 411 aa18.44■□□□□ 0.54
LSM6-207ENST00000515311 GID4Q8IVV7 300 aa18.44■□□□□ 0.54
LSM6-207ENST00000515311 C8orf59Q8N0T1 100 aaPredicted RBP18.44■□□□□ 0.54
LSM6-207ENST00000515311 CLEC18CQ8NCF0 446 aa18.44■□□□□ 0.54
LSM6-207ENST00000515311 PROKR2Q8NFJ6 384 aa18.44■□□□□ 0.54
LSM6-207ENST00000515311 UBE2FQ969M7 185 aa18.44■□□□□ 0.54
LSM6-207ENST00000515311 FOXB1Q99853 325 aa18.44■□□□□ 0.54
LSM6-207ENST00000515311 ANKRD60Q9BZ19 345 aa18.44■□□□□ 0.54
LSM6-207ENST00000515311 RERGLQ9H628 205 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms