RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 ZNF735P0CB33 412 aa3.08□□□□□ -1.92
HMGCS1-207ENST00000514610 CHMLP26374 656 aa3.08□□□□□ -1.92
HMGCS1-207ENST00000514610 AK4P27144 223 aaPredicted RBP3.08□□□□□ -1.92
HMGCS1-207ENST00000514610 LINC00315P59091 139 aa3.08□□□□□ -1.92
HMGCS1-207ENST00000514610 LCE3AQ5TA76 89 aa3.08□□□□□ -1.92
HMGCS1-207ENST00000514610 SASS6Q6UVJ0 657 aa3.08□□□□□ -1.92
HMGCS1-207ENST00000514610 ZYG11AQ6WRX3 759 aa3.08□□□□□ -1.92
HMGCS1-207ENST00000514610 ZNF493Q6ZR52 646 aa3.08□□□□□ -1.92
HMGCS1-207ENST00000514610 NCCRP1Q6ZVX7 275 aaPredicted RBP3.08□□□□□ -1.92
HMGCS1-207ENST00000514610 KRTAP5-2Q701N4 177 aa3.08□□□□□ -1.92
HMGCS1-207ENST00000514610 SAXO1Q8IYX7 474 aa3.08□□□□□ -1.92
HMGCS1-207ENST00000514610 FAM86B1Q8N7N1 296 aa3.08□□□□□ -1.92
HMGCS1-207ENST00000514610 STARD4Q96DR4 205 aa3.08□□□□□ -1.92
HMGCS1-207ENST00000514610 IFI27L2Q9H2X8 130 aa3.08□□□□□ -1.92
HMGCS1-207ENST00000514610 NOX3Q9HBY0 568 aa3.08□□□□□ -1.92
HMGCS1-207ENST00000514610 CD84Q9UIB8 345 aa3.08□□□□□ -1.92
HMGCS1-207ENST00000514610 NUP50Q9UKX7 468 aa3.08□□□□□ -1.92
HMGCS1-207ENST00000514610 MN1Q10571 1320 aaPredicted RBP3.08□□□□□ -1.92
HMGCS1-207ENST00000514610 CENPJQ9HC77 1338 aaPredicted RBP3.08□□□□□ -1.92
HMGCS1-207ENST00000514610 CARMIL3Q8ND23 1372 aa3.08□□□□□ -1.92
HMGCS1-207ENST00000514610 A0A0B4J2A0 478 aa3.07□□□□□ -1.92
HMGCS1-207ENST00000514610 ZNF324O75467 553 aaPredicted RBP3.07□□□□□ -1.92
HMGCS1-207ENST00000514610 LONP1P36776 959 aaKnown RBP3.07□□□□□ -1.92
HMGCS1-207ENST00000514610 NSG1P42857 185 aa3.07□□□□□ -1.92
HMGCS1-207ENST00000514610 CCNHP51946 323 aaPredicted RBP3.07□□□□□ -1.92
HMGCS1-207ENST00000514610 NUTF2P61970 127 aaKnown RBP3.07□□□□□ -1.92
HMGCS1-207ENST00000514610 ACTA2P62736 377 aa3.07□□□□□ -1.92
HMGCS1-207ENST00000514610 ACTG2P63267 376 aa3.07□□□□□ -1.92
HMGCS1-207ENST00000514610 ACTC1P68032 377 aa3.07□□□□□ -1.92
HMGCS1-207ENST00000514610 KCTD19Q17RG1 926 aaPredicted RBP3.07□□□□□ -1.92
HMGCS1-207ENST00000514610 DUX4L9Q6RFH8 374 aaPredicted RBP3.07□□□□□ -1.92
HMGCS1-207ENST00000514610 Q6ZR03 302 aa3.07□□□□□ -1.92
HMGCS1-207ENST00000514610 TMEM179Q6ZVK1 233 aa3.07□□□□□ -1.92
HMGCS1-207ENST00000514610 NANOGNBQ7Z5D8 188 aa3.07□□□□□ -1.92
HMGCS1-207ENST00000514610 PDIK1LQ8N165 341 aa3.07□□□□□ -1.92
HMGCS1-207ENST00000514610 EID2Q8N6I1 236 aa3.07□□□□□ -1.92
HMGCS1-207ENST00000514610 CYB561D1Q8N8Q1 229 aa3.07□□□□□ -1.92
HMGCS1-207ENST00000514610 C15orf56Q8N910 161 aa3.07□□□□□ -1.92
HMGCS1-207ENST00000514610 OR10G2Q8NGC3 310 aa3.07□□□□□ -1.92
HMGCS1-207ENST00000514610 OR10R2Q8NGX6 335 aa3.07□□□□□ -1.92
HMGCS1-207ENST00000514610 PIBF1Q8WXW3 757 aa3.07□□□□□ -1.92
HMGCS1-207ENST00000514610 TPD52L3Q96J77 140 aa3.07□□□□□ -1.92
HMGCS1-207ENST00000514610 BMFQ96LC9 184 aa3.07□□□□□ -1.92
HMGCS1-207ENST00000514610 P2RX4Q99571 388 aa3.07□□□□□ -1.92
HMGCS1-207ENST00000514610 CHAC1Q9BUX1 264 aa3.07□□□□□ -1.92
HMGCS1-207ENST00000514610 PKIBQ9C010 78 aa3.07□□□□□ -1.92
HMGCS1-207ENST00000514610 NEUROG2Q9H2A3 272 aa3.07□□□□□ -1.92
HMGCS1-207ENST00000514610 FGF20Q9NP95 211 aaPredicted RBP3.07□□□□□ -1.92
HMGCS1-207ENST00000514610 SHPKQ9UHJ6 478 aa3.07□□□□□ -1.92
HMGCS1-207ENST00000514610 PSG8Q9UQ74 426 aa3.07□□□□□ -1.92
HMGCS1-207ENST00000514610 IGKV2D-24A0A075B6R9 120 aa3.06□□□□□ -1.92
HMGCS1-207ENST00000514610 UBXN8O00124 270 aa3.06□□□□□ -1.92
HMGCS1-207ENST00000514610 MRPS12O15235 138 aaKnown RBP3.06□□□□□ -1.92
HMGCS1-207ENST00000514610 MAGEB4O15481 346 aaPredicted RBP3.06□□□□□ -1.92
HMGCS1-207ENST00000514610 CLPXO76031 633 aa3.06□□□□□ -1.92
HMGCS1-207ENST00000514610 AIFM1O95831 613 aa3.06□□□□□ -1.92
HMGCS1-207ENST00000514610 CLIC3O95833 236 aa3.06□□□□□ -1.92
HMGCS1-207ENST00000514610 RETP07949 1114 aa3.06□□□□□ -1.92
HMGCS1-207ENST00000514610 GNAO1P09471 354 aa3.06□□□□□ -1.92
HMGCS1-207ENST00000514610 AQP2P41181 271 aa3.06□□□□□ -1.92
HMGCS1-207ENST00000514610 MNAT1P51948 309 aa3.06□□□□□ -1.92
HMGCS1-207ENST00000514610 ATP5IP56385 69 aaPredicted RBP3.06□□□□□ -1.92
HMGCS1-207ENST00000514610 PFN3P60673 137 aa3.06□□□□□ -1.92
HMGCS1-207ENST00000514610 YWHAGP61981 247 aaKnown RBP eCLIP3.06□□□□□ -1.92
HMGCS1-207ENST00000514610 HMGN5P82970 282 aaKnown RBP3.06□□□□□ -1.92
HMGCS1-207ENST00000514610 SLAQ13239 276 aa3.06□□□□□ -1.92
HMGCS1-207ENST00000514610 POU2AF1Q16633 256 aa3.06□□□□□ -1.92
HMGCS1-207ENST00000514610 FAM83EQ2M2I3 478 aa3.06□□□□□ -1.92
HMGCS1-207ENST00000514610 VPS26BQ4G0F5 336 aa3.06□□□□□ -1.92
HMGCS1-207ENST00000514610 ANKRD26P1Q6NSI1 321 aa3.06□□□□□ -1.92
HMGCS1-207ENST00000514610 TAS2R42Q7RTR8 314 aa3.06□□□□□ -1.92
HMGCS1-207ENST00000514610 PEX26Q7Z412 305 aa3.06□□□□□ -1.92
HMGCS1-207ENST00000514610 MMAAQ8IVH4 418 aaKnown RBP3.06□□□□□ -1.92
HMGCS1-207ENST00000514610 FBXL13Q8NEE6 735 aa3.06□□□□□ -1.92
HMGCS1-207ENST00000514610 SPATA4Q8NEY3 305 aa3.06□□□□□ -1.92
HMGCS1-207ENST00000514610 RHEBL1Q8TAI7 183 aa3.06□□□□□ -1.92
HMGCS1-207ENST00000514610 GPR151Q8TDV0 419 aa3.06□□□□□ -1.92
HMGCS1-207ENST00000514610 RNF139Q8WU17 664 aa3.06□□□□□ -1.92
HMGCS1-207ENST00000514610 KIFAP3Q92845 792 aa3.06□□□□□ -1.92
HMGCS1-207ENST00000514610 PIK3IP1Q96FE7 263 aa3.06□□□□□ -1.92
HMGCS1-207ENST00000514610 ATP5SQ99766 215 aa3.06□□□□□ -1.92
HMGCS1-207ENST00000514610 ING4Q9UNL4 249 aa3.06□□□□□ -1.92
HMGCS1-207ENST00000514610 IGHV3-66A0A0C4DH42 116 aa3.05□□□□□ -1.92
HMGCS1-207ENST00000514610 HEATR9A2RTY3 570 aa3.05□□□□□ -1.92
HMGCS1-207ENST00000514610 GOLGA8OA6NCC3 632 aa3.05□□□□□ -1.92
HMGCS1-207ENST00000514610 GOLGA8NF8WBI6 632 aa3.05□□□□□ -1.92
HMGCS1-207ENST00000514610 INS-IGF2F8WCM5 200 aa3.05□□□□□ -1.92
HMGCS1-207ENST00000514610 SPAG7O75391 227 aa3.05□□□□□ -1.92
HMGCS1-207ENST00000514610 EEDO75530 441 aaKnown RBP3.05□□□□□ -1.92
HMGCS1-207ENST00000514610 PRPS2P11908 318 aa3.05□□□□□ -1.92
HMGCS1-207ENST00000514610 TNNI1P19237 187 aa3.05□□□□□ -1.92
HMGCS1-207ENST00000514610 SSR4P51571 173 aa3.05□□□□□ -1.92
HMGCS1-207ENST00000514610 ZSCAN26Q16670 478 aa3.05□□□□□ -1.92
HMGCS1-207ENST00000514610 HES5Q5TA89 166 aa3.05□□□□□ -1.92
HMGCS1-207ENST00000514610 FAM92BQ6ZTR7 304 aa3.05□□□□□ -1.92
HMGCS1-207ENST00000514610 OR10G4Q8NGN3 311 aa3.05□□□□□ -1.92
HMGCS1-207ENST00000514610 RAB3IL1Q8TBN0 382 aa3.05□□□□□ -1.92
HMGCS1-207ENST00000514610 CXorf40AQ8TE69 158 aa3.05□□□□□ -1.92
HMGCS1-207ENST00000514610 FAM3DQ96BQ1 224 aa3.05□□□□□ -1.92
HMGCS1-207ENST00000514610 DUS3LQ96G46 650 aaKnown RBP3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms