RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 EPHA2P29317 976 aa8.59□□□□□ -1.03
TOPBP1-209ENST00000513818 POLR2IP36954 125 aaKnown RBP8.59□□□□□ -1.03
TOPBP1-209ENST00000513818 CDKN2AP42771 156 aaKnown RBP8.59□□□□□ -1.03
TOPBP1-209ENST00000513818 RAP1BP61224 184 aa8.59□□□□□ -1.03
TOPBP1-209ENST00000513818 RAP1AP62834 184 aa8.59□□□□□ -1.03
TOPBP1-209ENST00000513818 PPP2R2BQ00005 443 aa8.59□□□□□ -1.03
TOPBP1-209ENST00000513818 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.59□□□□□ -1.03
TOPBP1-209ENST00000513818 DAG1Q14118 895 aa8.59□□□□□ -1.03
TOPBP1-209ENST00000513818 P2RY6Q15077 328 aa8.59□□□□□ -1.03
TOPBP1-209ENST00000513818 TAF11Q15544 211 aa8.59□□□□□ -1.03
TOPBP1-209ENST00000513818 LRRC36Q1X8D7 754 aa8.59□□□□□ -1.03
TOPBP1-209ENST00000513818 TBRG1Q3YBR2 411 aa8.59□□□□□ -1.03
TOPBP1-209ENST00000513818 LPCAT4Q643R3 524 aa8.59□□□□□ -1.03
TOPBP1-209ENST00000513818 RPL13AP3Q6NVV1 102 aa8.59□□□□□ -1.03
TOPBP1-209ENST00000513818 ZNF813Q6ZN06 617 aa8.59□□□□□ -1.03
TOPBP1-209ENST00000513818 HDDC2Q7Z4H3 204 aa8.59□□□□□ -1.03
TOPBP1-209ENST00000513818 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.59□□□□□ -1.03
TOPBP1-209ENST00000513818 LILRB2Q8N423 598 aa8.59□□□□□ -1.03
TOPBP1-209ENST00000513818 CBR4Q8N4T8 237 aa8.59□□□□□ -1.03
TOPBP1-209ENST00000513818 WDR31Q8NA23 367 aa8.59□□□□□ -1.03
TOPBP1-209ENST00000513818 ACBD4Q8NC06 268 aa8.59□□□□□ -1.03
TOPBP1-209ENST00000513818 STEAP2Q8NFT2 490 aa8.59□□□□□ -1.03
TOPBP1-209ENST00000513818 OR52E2Q8NGJ4 325 aa8.59□□□□□ -1.03
TOPBP1-209ENST00000513818 OR9Q1Q8NGQ5 310 aa8.59□□□□□ -1.03
TOPBP1-209ENST00000513818 TSSK2Q96PF2 358 aa8.59□□□□□ -1.03
TOPBP1-209ENST00000513818 ALG12Q9BV10 488 aa8.59□□□□□ -1.03
TOPBP1-209ENST00000513818 C1QTNF6Q9BXI9 259 aa8.59□□□□□ -1.03
TOPBP1-209ENST00000513818 RIBC2Q9H4K1 309 aa8.59□□□□□ -1.03
TOPBP1-209ENST00000513818 NOX3Q9HBY0 568 aa8.59□□□□□ -1.03
TOPBP1-209ENST00000513818 B3GAT2Q9NPZ5 323 aa8.59□□□□□ -1.03
TOPBP1-209ENST00000513818 IL20Q9NYY1 176 aa8.59□□□□□ -1.03
TOPBP1-209ENST00000513818 NPAP1Q9NZP6 1156 aa8.59□□□□□ -1.03
TOPBP1-209ENST00000513818 POFUT2Q9Y2G5 429 aa8.59□□□□□ -1.03
TOPBP1-209ENST00000513818 GPR52Q9Y2T5 361 aa8.59□□□□□ -1.03
TOPBP1-209ENST00000513818 UGT2A1Q9Y4X1 527 aa8.59□□□□□ -1.03
TOPBP1-209ENST00000513818 ANKHD1Q8IWZ3 2542 aaKnown RBP8.59□□□□□ -1.03
TOPBP1-209ENST00000513818 PRR14LQ5THK1 2151 aa8.59□□□□□ -1.03
TOPBP1-209ENST00000513818 CELSR2Q9HCU4 2923 aa8.59□□□□□ -1.03
TOPBP1-209ENST00000513818 OR6C68A6NDL8 312 aa8.58□□□□□ -1.04
TOPBP1-209ENST00000513818 OR6C65A6NJZ3 312 aa8.58□□□□□ -1.04
TOPBP1-209ENST00000513818 OR5H1A6NKK0 313 aa8.58□□□□□ -1.04
TOPBP1-209ENST00000513818 FAM171A2A8MVW0 826 aa8.58□□□□□ -1.04
TOPBP1-209ENST00000513818 ZNF99A8MXY4 864 aaPredicted RBP8.58□□□□□ -1.04
TOPBP1-209ENST00000513818 DCTN6O00399 190 aa8.58□□□□□ -1.04
TOPBP1-209ENST00000513818 DHHO43323 396 aa8.58□□□□□ -1.04
TOPBP1-209ENST00000513818 TXNDC12O95881 172 aa8.58□□□□□ -1.04
TOPBP1-209ENST00000513818 PATE4P0C8F1 98 aa8.58□□□□□ -1.04
TOPBP1-209ENST00000513818 PEX2P28328 305 aa8.58□□□□□ -1.04
TOPBP1-209ENST00000513818 NOS3P29474 1203 aa8.58□□□□□ -1.04
TOPBP1-209ENST00000513818 PYCR1P32322 319 aa8.58□□□□□ -1.04
TOPBP1-209ENST00000513818 GNALP38405 381 aa8.58□□□□□ -1.04
TOPBP1-209ENST00000513818 CAPZA2P47755 286 aa8.58□□□□□ -1.04
TOPBP1-209ENST00000513818 ZNF83P51522 516 aa8.58□□□□□ -1.04
TOPBP1-209ENST00000513818 CRMP1Q14194 572 aa8.58□□□□□ -1.04
TOPBP1-209ENST00000513818 GINS1Q14691 196 aa8.58□□□□□ -1.04
TOPBP1-209ENST00000513818 TRIP10Q15642 601 aa8.58□□□□□ -1.04
TOPBP1-209ENST00000513818 HIST3H3Q16695 136 aa8.58□□□□□ -1.04
TOPBP1-209ENST00000513818 ZIK1Q3SY52 487 aaPredicted RBP8.58□□□□□ -1.04
TOPBP1-209ENST00000513818 FAM205BPQ63HN1 556 aa8.58□□□□□ -1.04
TOPBP1-209ENST00000513818 KDM4DQ6B0I6 523 aa8.58□□□□□ -1.04
TOPBP1-209ENST00000513818 GPR139Q6DWJ6 353 aa8.58□□□□□ -1.04
TOPBP1-209ENST00000513818 ACSM5Q6NUN0 579 aa8.58□□□□□ -1.04
TOPBP1-209ENST00000513818 SLC25A47Q6Q0C1 308 aa8.58□□□□□ -1.04
TOPBP1-209ENST00000513818 SEZ6L2Q6UXD5 910 aa8.58□□□□□ -1.04
TOPBP1-209ENST00000513818 CD300LDQ6UXZ3 194 aa8.58□□□□□ -1.04
TOPBP1-209ENST00000513818 ABHD12BQ7Z5M8 362 aaPredicted RBP8.58□□□□□ -1.04
TOPBP1-209ENST00000513818 SLC37A3Q8NCC5 494 aa8.58□□□□□ -1.04
TOPBP1-209ENST00000513818 OR2T33Q8NG76 320 aa8.58□□□□□ -1.04
TOPBP1-209ENST00000513818 FGFBP3Q8TAT2 258 aa8.58□□□□□ -1.04
TOPBP1-209ENST00000513818 BCL2L2Q92843 193 aaPredicted RBP8.58□□□□□ -1.04
TOPBP1-209ENST00000513818 LRR1Q96L50 414 aa8.58□□□□□ -1.04
TOPBP1-209ENST00000513818 SLC29A1Q99808 456 aa8.58□□□□□ -1.04
TOPBP1-209ENST00000513818 FOXB1Q99853 325 aa8.58□□□□□ -1.04
TOPBP1-209ENST00000513818 OSBPL10Q9BXB5 764 aa8.58□□□□□ -1.04
TOPBP1-209ENST00000513818 MED20Q9H944 212 aa8.58□□□□□ -1.04
TOPBP1-209ENST00000513818 SEC61A2Q9H9S3 476 aa8.58□□□□□ -1.04
TOPBP1-209ENST00000513818 RPRD1BQ9NQG5 326 aaKnown RBP8.58□□□□□ -1.04
TOPBP1-209ENST00000513818 SLC17A5Q9NRA2 495 aa8.58□□□□□ -1.04
TOPBP1-209ENST00000513818 TMEM38BQ9NVV0 291 aa8.58□□□□□ -1.04
TOPBP1-209ENST00000513818 STX18Q9P2W9 335 aaKnown RBP8.58□□□□□ -1.04
TOPBP1-209ENST00000513818 NKX1-2Q9UD57 310 aaPredicted RBP8.58□□□□□ -1.04
TOPBP1-209ENST00000513818 ASH1LQ9NR48 2969 aaKnown RBP8.57□□□□□ -1.04
TOPBP1-209ENST00000513818 FAM183AA6NL82 134 aa8.57□□□□□ -1.04
TOPBP1-209ENST00000513818 H0YHG0 523 aa8.57□□□□□ -1.04
TOPBP1-209ENST00000513818 RPL36A-HNRNPH2H7BZ11 118 aa8.57□□□□□ -1.04
TOPBP1-209ENST00000513818 ARPC3O15145 178 aa8.57□□□□□ -1.04
TOPBP1-209ENST00000513818 SLC16A7O60669 478 aa8.57□□□□□ -1.04
TOPBP1-209ENST00000513818 MPZL1O95297 269 aa8.57□□□□□ -1.04
TOPBP1-209ENST00000513818 HLA-HP01893 362 aa8.57□□□□□ -1.04
TOPBP1-209ENST00000513818 ALPLP05186 524 aa8.57□□□□□ -1.04
TOPBP1-209ENST00000513818 SCG5P05408 212 aa8.57□□□□□ -1.04
TOPBP1-209ENST00000513818 GYPBP06028 91 aa8.57□□□□□ -1.04
TOPBP1-209ENST00000513818 CELA3BP08861 270 aa8.57□□□□□ -1.04
TOPBP1-209ENST00000513818 CLUP10909 449 aa8.57□□□□□ -1.04
TOPBP1-209ENST00000513818 APEHP13798 732 aaKnown RBP8.57□□□□□ -1.04
TOPBP1-209ENST00000513818 HOXC12P31275 282 aa8.57□□□□□ -1.04
TOPBP1-209ENST00000513818 GRK5P34947 590 aa8.57□□□□□ -1.04
TOPBP1-209ENST00000513818 CENPAP49450 140 aa8.57□□□□□ -1.04
TOPBP1-209ENST00000513818 CRISP1P54107 249 aa8.57□□□□□ -1.04
TOPBP1-209ENST00000513818 PIGFQ07326 219 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms