RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 BRF2Q9HAW0 419 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 NMRAL1Q9HBL8 299 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 SLC35C2Q9NQQ7 365 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 SERINC1Q9NRX5 453 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 SLC7A10Q9NS82 523 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 ZNF275Q9NSD4 429 aaPredicted RBP3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 THAP1Q9NVV9 213 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 NKIRAS2Q9NYR9 191 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 GRHL1Q9NZI5 618 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 FLRT3Q9NZU0 649 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 SENP1Q9P0U3 644 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 ZDHHC2Q9UIJ5 367 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 ZNF346Q9UL40 294 aaKnown RBP3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 PACSIN2Q9UNF0 486 aaPredicted RBP3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 TRAPPC4Q9Y296 219 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 AUP1Q9Y679 476 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 POMT1Q9Y6A1 747 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 IGHV3-15A0A0B4J1V0 119 aa3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 NPIPB13A6NJU9 1138 aa3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 NPIPB5A8MRT5 1133 aa3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 SYCE1LA8MT33 242 aa3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 NPIPB4C9JG80 1138 aa3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 UPK1AO00322 258 aa3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 KLF11O14901 512 aa3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 WNT9BO14905 357 aa3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 TRAF3IP2O43734 574 aaPredicted RBP3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 XPNPEP2O43895 674 aa3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 GMFGO60234 142 aa3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 EIF4E2O60573 245 aaKnown RBP3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 PMS2P2O95744 297 aa3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 NUDT14O95848 222 aa3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 IGHV3-9P01782 118 aa3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 IGHV2-5P01817 119 aa3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 MYZAPP0CAP1 466 aa3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 PRPS2P11908 318 aa3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 STMN1P16949 149 aa3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 APOBEC1P41238 236 aaKnown RBP3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 SH3BGRP55822 239 aaPredicted RBP3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 SLC3A1Q07837 685 aa3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 IFT88Q13099 833 aa3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 ZNF154Q13106 437 aa3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 GTF2H2Q13888 395 aa3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 OR4D1Q15615 310 aa3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 MOGQ16653 247 aa3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 MRGPRG-AS1Q2M3A8 158 aa3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 PCGF3Q3KNV8 242 aa3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 HYDINQ4G0P3 5121 aa3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 KLF17Q5JT82 389 aaPredicted RBP3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 RNASEH2BQ5TBB1 312 aaKnown RBP3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 TSPO2Q5TGU0 170 aa3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 GTF2H2CQ6P1K8 395 aa3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 C3orf33Q6P1S2 294 aa3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 C16orf54Q6UWD8 224 aa3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 ZNF620Q6ZNG0 422 aa3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 CYS1Q717R9 158 aa3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 COMMD6Q7Z4G1 85 aa3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 CCDC91Q7Z6B0 441 aa3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 WDFY1Q8IWB7 410 aa3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 PDIK1LQ8N165 341 aa3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 CDRT4Q8N9R6 151 aa3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 DEFB108BQ8NET1 73 aa3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 OR52E4Q8NGH9 312 aa3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 OR52E2Q8NGJ4 325 aa3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 OR9A2Q8NGT5 310 aa3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 DNAH3Q8TD57 4116 aa3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 GPR151Q8TDV0 419 aa3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 ST7LQ8TDW4 575 aa3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 TMEM234Q8WY98 164 aa3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 ST8SIA1Q92185 356 aa3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 DYRK2Q92630 601 aa3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 BCL2L2Q92843 193 aaPredicted RBP3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 ATP6V1E2Q96A05 226 aa3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 TMEM45BQ96B21 275 aa3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 ELP4Q96EB1 424 aa3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 MAELQ96JY0 434 aaKnown RBP3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 DUX5Q96PT3 197 aa3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 OR5B2Q96R09 309 aa3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 ATOH8Q96SQ7 321 aa3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 SF3B5Q9BWJ5 86 aaKnown RBP3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 CADM1Q9BY67 442 aaKnown RBP3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 LAT2Q9GZY6 243 aa3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 C16orf95Q9H693 158 aa3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 DENND2DQ9H6A0 471 aaPredicted RBP3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 NARFLQ9H6Q4 476 aa3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 ZNF556Q9HAH1 456 aa3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 PFDN4Q9NQP4 134 aa3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 GIN1Q9NXP7 522 aa3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 SACSQ9NZJ4 4579 aa3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 C1RLQ9NZP8 487 aa3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 DSPPQ9NZW4 1301 aa3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 VPS29Q9UBQ0 182 aa3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 IL20RAQ9UHF4 553 aa3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 PRDM4Q9UKN5 801 aa3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 SLC9A8Q9Y2E8 581 aa3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 RNF11Q9Y3C5 154 aa3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 HDGFL3Q9Y3E1 203 aa3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 SPIN1Q9Y657 262 aaPredicted RBP3.06□□□□□ -1.92
PDLIM5-218ENST00000513341 ARHGAP32A7KAX9 2087 aa3.05□□□□□ -1.92
PDLIM5-218ENST00000513341 A6NLC8 198 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms