RNA–Protein interactions for RNA: ENST00000511586.5

PDLIM5-215, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-215ENST00000511586 TUBA1BP68363 451 aa6.24□□□□□ -1.41
PDLIM5-215ENST00000511586 TUBA4AP68366 448 aa6.24□□□□□ -1.41
PDLIM5-215ENST00000511586 MYBPC1Q00872 1141 aa6.24□□□□□ -1.41
PDLIM5-215ENST00000511586 CD47Q08722 323 aa6.24□□□□□ -1.41
PDLIM5-215ENST00000511586 PPP1R8Q12972 351 aaKnown RBP6.24□□□□□ -1.41
PDLIM5-215ENST00000511586 MICAQ29983 383 aa6.24□□□□□ -1.41
PDLIM5-215ENST00000511586 RFX4Q33E94 735 aa6.24□□□□□ -1.41
PDLIM5-215ENST00000511586 NRN1LQ496H8 165 aa6.24□□□□□ -1.41
PDLIM5-215ENST00000511586 ZNF672Q499Z4 452 aaPredicted RBP6.24□□□□□ -1.41
PDLIM5-215ENST00000511586 C10orf128Q5T292 105 aa6.24□□□□□ -1.41
PDLIM5-215ENST00000511586 GPR139Q6DWJ6 353 aa6.24□□□□□ -1.41
PDLIM5-215ENST00000511586 ZNF770Q6IQ21 691 aaPredicted RBP6.24□□□□□ -1.41
PDLIM5-215ENST00000511586 PGBD2Q6P3X8 592 aa6.24□□□□□ -1.41
PDLIM5-215ENST00000511586 SLC25A47Q6Q0C1 308 aa6.24□□□□□ -1.41
PDLIM5-215ENST00000511586 SMARCD3Q6STE5 483 aa6.24□□□□□ -1.41
PDLIM5-215ENST00000511586 SLC22A25Q6T423 547 aa6.24□□□□□ -1.41
PDLIM5-215ENST00000511586 THSD4Q6ZMP0 1018 aa6.24□□□□□ -1.41
PDLIM5-215ENST00000511586 C20orf204Q6ZNR8 217 aa6.24□□□□□ -1.41
PDLIM5-215ENST00000511586 TUBA1AQ71U36 451 aa6.24□□□□□ -1.41
PDLIM5-215ENST00000511586 FAM122BQ7Z309 247 aa6.24□□□□□ -1.41
PDLIM5-215ENST00000511586 DPPA2Q7Z7J5 298 aa6.24□□□□□ -1.41
PDLIM5-215ENST00000511586 AMIGO2Q86SJ2 522 aa6.24□□□□□ -1.41
PDLIM5-215ENST00000511586 SLC22A24Q8N4F4 322 aa6.24□□□□□ -1.41
PDLIM5-215ENST00000511586 ZNF611Q8N823 705 aa6.24□□□□□ -1.41
PDLIM5-215ENST00000511586 PAPD5Q8NDF8 572 aaKnown RBP6.24□□□□□ -1.41
PDLIM5-215ENST00000511586 OR9Q2Q8NGE9 314 aa6.24□□□□□ -1.41
PDLIM5-215ENST00000511586 LILRB1Q8NHL6 650 aaPredicted RBP6.24□□□□□ -1.41
PDLIM5-215ENST00000511586 FANK1Q8TC84 345 aa6.24□□□□□ -1.41
PDLIM5-215ENST00000511586 NANOS1Q8WY41 292 aaKnown RBP6.24□□□□□ -1.41
PDLIM5-215ENST00000511586 Q96M85 177 aa6.24□□□□□ -1.41
PDLIM5-215ENST00000511586 ZNF570Q96NI8 536 aa6.24□□□□□ -1.41
PDLIM5-215ENST00000511586 SLC38A2Q96QD8 506 aa6.24□□□□□ -1.41
PDLIM5-215ENST00000511586 TSPAN32Q96QS1 320 aa6.24□□□□□ -1.41
PDLIM5-215ENST00000511586 GPX7Q96SL4 187 aaPredicted RBP6.24□□□□□ -1.41
PDLIM5-215ENST00000511586 KCNK17Q96T54 332 aa6.24□□□□□ -1.41
PDLIM5-215ENST00000511586 KCNS3Q9BQ31 491 aa6.24□□□□□ -1.41
PDLIM5-215ENST00000511586 NRIP3Q9NQ35 241 aa6.24□□□□□ -1.41
PDLIM5-215ENST00000511586 TMEM38BQ9NVV0 291 aa6.24□□□□□ -1.41
PDLIM5-215ENST00000511586 VNN3Q9NY84 501 aa6.24□□□□□ -1.41
PDLIM5-215ENST00000511586 CRNNQ9UBG3 495 aaPredicted RBP6.24□□□□□ -1.41
PDLIM5-215ENST00000511586 IL20RAQ9UHF4 553 aa6.24□□□□□ -1.41
PDLIM5-215ENST00000511586 ITGB1BP2Q9UKP3 347 aa6.24□□□□□ -1.41
PDLIM5-215ENST00000511586 PLEKHA6Q9Y2H5 1048 aa6.24□□□□□ -1.41
PDLIM5-215ENST00000511586 ADAM18Q9Y3Q7 739 aa6.24□□□□□ -1.41
PDLIM5-215ENST00000511586 IER3IP1Q9Y5U9 82 aa6.24□□□□□ -1.41
PDLIM5-215ENST00000511586 CENPEQ02224 2701 aa6.24□□□□□ -1.41
PDLIM5-215ENST00000511586 ABCA4P78363 2273 aa6.23□□□□□ -1.41
PDLIM5-215ENST00000511586 ALPK2Q86TB3 2170 aa6.23□□□□□ -1.41
PDLIM5-215ENST00000511586 IGHV1-18A0A0C4DH31 117 aa6.23□□□□□ -1.41
PDLIM5-215ENST00000511586 TEX13CA0A0J9YWL9 993 aa6.23□□□□□ -1.41
PDLIM5-215ENST00000511586 PRSS37A4D1T9 235 aa6.23□□□□□ -1.41
PDLIM5-215ENST00000511586 SHISA9B4DS77 424 aa6.23□□□□□ -1.41
PDLIM5-215ENST00000511586 IMPA2O14732 288 aa6.23□□□□□ -1.41
PDLIM5-215ENST00000511586 ARPC3O15145 178 aa6.23□□□□□ -1.41
PDLIM5-215ENST00000511586 IDH3BO43837 385 aa6.23□□□□□ -1.41
PDLIM5-215ENST00000511586 UBL3O95164 117 aa6.23□□□□□ -1.41
PDLIM5-215ENST00000511586 ATE1O95260 518 aa6.23□□□□□ -1.41
PDLIM5-215ENST00000511586 SLC2A10O95528 541 aa6.23□□□□□ -1.41
PDLIM5-215ENST00000511586 TXNDC12O95881 172 aa6.23□□□□□ -1.41
PDLIM5-215ENST00000511586 GASTP01350 101 aa6.23□□□□□ -1.41
PDLIM5-215ENST00000511586 IGKV3-15P01624 115 aa6.23□□□□□ -1.41
PDLIM5-215ENST00000511586 IGLV1-44P01699 117 aa6.23□□□□□ -1.41
PDLIM5-215ENST00000511586 HLA-HP01893 362 aa6.23□□□□□ -1.41
PDLIM5-215ENST00000511586 CRYAAP02489 173 aa6.23□□□□□ -1.41
PDLIM5-215ENST00000511586 RPSAP08865 295 aaKnown RBP6.23□□□□□ -1.41
PDLIM5-215ENST00000511586 CD53P19397 219 aa6.23□□□□□ -1.41
PDLIM5-215ENST00000511586 NPR2P20594 1047 aa6.23□□□□□ -1.41
PDLIM5-215ENST00000511586 GSTM3P21266 225 aa6.23□□□□□ -1.41
PDLIM5-215ENST00000511586 SLC6A6P31641 620 aa6.23□□□□□ -1.41
PDLIM5-215ENST00000511586 IST1P53990 364 aa6.23□□□□□ -1.41
PDLIM5-215ENST00000511586 FXYD6P3P58550 94 aa6.23□□□□□ -1.41
PDLIM5-215ENST00000511586 PIGFQ07326 219 aa6.23□□□□□ -1.41
PDLIM5-215ENST00000511586 KRR1Q13601 381 aaKnown RBP6.23□□□□□ -1.41
PDLIM5-215ENST00000511586 ATP6AP1Q15904 470 aa6.23□□□□□ -1.41
PDLIM5-215ENST00000511586 GSG1Q2KHT4 349 aa6.23□□□□□ -1.41
PDLIM5-215ENST00000511586 RPL13AP3Q6NVV1 102 aa6.23□□□□□ -1.41
PDLIM5-215ENST00000511586 ZNF620Q6ZNG0 422 aa6.23□□□□□ -1.41
PDLIM5-215ENST00000511586 ADCK1Q86TW2 530 aa6.23□□□□□ -1.41
PDLIM5-215ENST00000511586 MDP1Q86V88 176 aa6.23□□□□□ -1.41
PDLIM5-215ENST00000511586 SKA3Q8IX90 412 aa6.23□□□□□ -1.41
PDLIM5-215ENST00000511586 GALNT4Q8N4A0 578 aa6.23□□□□□ -1.41
PDLIM5-215ENST00000511586 CLDN22Q8N7P3 220 aa6.23□□□□□ -1.41
PDLIM5-215ENST00000511586 AQP11Q8NBQ7 271 aa6.23□□□□□ -1.41
PDLIM5-215ENST00000511586 IL17RDQ8NFM7 739 aa6.23□□□□□ -1.41
PDLIM5-215ENST00000511586 KBTBD8Q8NFY9 601 aa6.23□□□□□ -1.41
PDLIM5-215ENST00000511586 GIPC3Q8TF64 312 aa6.23□□□□□ -1.41
PDLIM5-215ENST00000511586 NSMAFQ92636 917 aa6.23□□□□□ -1.41
PDLIM5-215ENST00000511586 PIGTQ969N2 578 aa6.23□□□□□ -1.41
PDLIM5-215ENST00000511586 FBXW5Q969U6 566 aa6.23□□□□□ -1.41
PDLIM5-215ENST00000511586 GTPBP3Q969Y2 492 aaKnown RBP6.23□□□□□ -1.41
PDLIM5-215ENST00000511586 NMD3Q96D46 503 aaKnown RBP6.23□□□□□ -1.41
PDLIM5-215ENST00000511586 MBD6Q96DN6 1003 aa6.23□□□□□ -1.41
PDLIM5-215ENST00000511586 CENPNQ96H22 339 aaPredicted RBP6.23□□□□□ -1.41
PDLIM5-215ENST00000511586 SAMD8Q96LT4 415 aa6.23□□□□□ -1.41
PDLIM5-215ENST00000511586 ERMAPQ96PL5 475 aaPredicted RBP6.23□□□□□ -1.41
PDLIM5-215ENST00000511586 CCL19Q99731 98 aa6.23□□□□□ -1.41
PDLIM5-215ENST00000511586 CIB1Q99828 191 aa6.23□□□□□ -1.41
PDLIM5-215ENST00000511586 BDH2Q9BUT1 245 aa6.23□□□□□ -1.41
PDLIM5-215ENST00000511586 C9orf16Q9BUW7 83 aa6.23□□□□□ -1.41
PDLIM5-215ENST00000511586 IFT27Q9BW83 186 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms