RNA–Protein interactions for RNA: ENST00000509769.5

USP53-205, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 1 (best)

Gene USP53, Length 4,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-205ENST00000509769 TRA2BP62995 288 aaKnown RBP3.31□□□□□ -1.88
USP53-205ENST00000509769 HBA1P69905 142 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 GABREP78334 506 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 SLC35A1P78382 337 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 HLA-DRB3P79483 266 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 GTF2BQ00403 316 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 ZNF85Q03923 595 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 AESQ08117 197 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 IL10RBQ08334 325 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 TCP10Q12799 353 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 GUCA2BQ16661 112 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 PNLIPRP3Q17RR3 467 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 RPEL1Q2QD12 228 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 CLEC6AQ6EIG7 209 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 POMZP3Q6PJE2 187 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 LCTLQ6UWM7 567 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 TMEM136Q6ZRR5 245 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 LRRTM1Q86UE6 522 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 AMZ2Q86W34 360 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 FAM129CQ86XR2 697 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 CDC20BQ86Y33 519 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 ZNF573Q86YE8 665 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 MISPQ8IVT2 679 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 OR4N4Q8N0Y3 316 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 C4orf32Q8N8J7 132 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 DTWD2Q8NBA8 298 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 OR2M7Q8NG81 312 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 OR9A2Q8NGT5 310 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 OR51Q1Q8NH59 317 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 UBA3Q8TBC4 463 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 CNIH3Q8TBE1 160 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 NETO1Q8TDF5 533 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 CDS1Q92903 461 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 TMEM106AQ96A25 262 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 RPL10LQ96L21 214 aaKnown RBP3.31□□□□□ -1.88
USP53-205ENST00000509769 MYADMQ96S97 322 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 WDR77Q9BQA1 342 aaPredicted RBP3.31□□□□□ -1.88
USP53-205ENST00000509769 ANAPC13Q9BS18 74 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 DDA1Q9BW61 102 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 MAGEH1Q9H213 219 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 SUV39H2Q9H5I1 410 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 ASCL3Q9NQ33 180 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 PARP11Q9NR21 331 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 DNAJC27Q9NZQ0 273 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 OSGIN1Q9UJX0 560 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 KCNK7Q9Y2U2 307 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 OR2A25A4D2G3 310 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 NPEPPSL1A6NEC2 478 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 C4orf47A7E2U8 309 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 CEBPZOSA8MTT3 80 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 ADM5C9JUS6 153 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 SULT2B1O00204 365 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 DCTN6O00399 190 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 HCRTR1O43613 425 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 PPP1R11O60927 126 aaPredicted RBP3.31□□□□□ -1.88
USP53-205ENST00000509769 ADAP1O75689 374 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 GLSO94925 669 aaPredicted RBP3.31□□□□□ -1.88
USP53-205ENST00000509769 THY1P04216 161 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 SPATA31C1P0DKV0 1188 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 CCKBRP32239 447 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 MC4RP32245 332 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 PYCR1P32322 319 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 DCTP40126 519 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 GYG1P46976 350 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 GALR1P47211 349 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 CCR8P51685 355 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 CNN1P51911 297 aaKnown RBP3.31□□□□□ -1.88
USP53-205ENST00000509769 WNT3AP56704 352 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 JAM2P57087 298 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 MRPS34P82930 218 aaKnown RBP3.31□□□□□ -1.88
USP53-205ENST00000509769 MEF2CQ06413 473 aaPredicted RBP3.31□□□□□ -1.88
USP53-205ENST00000509769 LTBQ06643 244 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 MGAT3Q09327 533 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 UGCGQ16739 394 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 HNRNPA1L2Q32P51 320 aaKnown RBP3.31□□□□□ -1.88
USP53-205ENST00000509769 ADPRMQ3LIE5 342 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 TMEM35AQ53FP2 167 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 ENTPD8Q5MY95 495 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 OR5M10Q6IEU7 315 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 FAM71F2Q6NXP2 309 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 AADACL2Q6P093 401 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 PARM1Q6UWI2 310 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 SBSNQ6UWP8 590 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 VGLL2Q8N8G2 317 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 OR2M3Q8NG83 312 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 OR5M9Q8NGP3 310 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 SPTSSAQ969W0 71 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 SHISA4Q96DD7 197 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 TMEM19Q96HH6 336 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 FAM71F1Q96KD3 344 aaPredicted RBP3.31□□□□□ -1.88
USP53-205ENST00000509769 OR5M11Q96RB7 305 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 F2RL3Q96RI0 385 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 NEURL2Q9BR09 285 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 CDCA4Q9BXL8 241 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 RIMS4Q9H426 269 aaPredicted RBP3.31□□□□□ -1.88
USP53-205ENST00000509769 OCEL1Q9H607 264 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 PIPOXQ9P0Z9 390 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 VAX2Q9UIW0 290 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 NAGKQ9UJ70 344 aa3.31□□□□□ -1.88
USP53-205ENST00000509769 GPR55Q9Y2T6 319 aaPredicted RBP3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms