RNA–Protein interactions for RNA: ENST00000509576.5

DDX41-210, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-210ENST00000509576 PCMT1P22061 227 aa11.34□□□□□ -0.59
DDX41-210ENST00000509576 ZFP36P26651 326 aaKnown RBP11.34□□□□□ -0.59
DDX41-210ENST00000509576 CDAP32320 146 aa11.34□□□□□ -0.59
DDX41-210ENST00000509576 GZMMP51124 257 aa11.34□□□□□ -0.59
DDX41-210ENST00000509576 MMP15P51511 669 aa11.34□□□□□ -0.59
DDX41-210ENST00000509576 ZNF133P52736 654 aaPredicted RBP11.34□□□□□ -0.59
DDX41-210ENST00000509576 UCP2P55851 309 aa11.34□□□□□ -0.59
DDX41-210ENST00000509576 KLF3P57682 345 aaPredicted RBP11.34□□□□□ -0.59
DDX41-210ENST00000509576 RBBP4Q09028 425 aa11.34□□□□□ -0.59
DDX41-210ENST00000509576 TSTQ16762 297 aaKnown RBP11.34□□□□□ -0.59
DDX41-210ENST00000509576 SPATA46Q5T0L3 261 aa11.34□□□□□ -0.59
DDX41-210ENST00000509576 SWT1Q5T5J6 900 aaKnown RBP11.34□□□□□ -0.59
DDX41-210ENST00000509576 ACSM5Q6NUN0 579 aa11.34□□□□□ -0.59
DDX41-210ENST00000509576 ZNF613Q6PF04 617 aa11.34□□□□□ -0.59
DDX41-210ENST00000509576 HIPK4Q8NE63 616 aa11.34□□□□□ -0.59
DDX41-210ENST00000509576 VANGL1Q8TAA9 524 aaPredicted RBP11.34□□□□□ -0.59
DDX41-210ENST00000509576 SYNPRQ8TBG9 265 aa11.34□□□□□ -0.59
DDX41-210ENST00000509576 ADAMTS16Q8TE57 1224 aa11.34□□□□□ -0.59
DDX41-210ENST00000509576 ZNF418Q8TF45 676 aaPredicted RBP11.34□□□□□ -0.59
DDX41-210ENST00000509576 SLC25A44Q96H78 314 aaPredicted RBP11.34□□□□□ -0.59
DDX41-210ENST00000509576 CACYBPQ9HB71 228 aaKnown RBP11.34□□□□□ -0.59
DDX41-210ENST00000509576 NKIRAS2Q9NYR9 191 aa11.34□□□□□ -0.59
DDX41-210ENST00000509576 VWFP04275 2813 aa11.33□□□□□ -0.6
DDX41-210ENST00000509576 FMO6PO60774 539 aa11.33□□□□□ -0.6
DDX41-210ENST00000509576 TRMUO75648 421 aaKnown RBP11.33□□□□□ -0.6
DDX41-210ENST00000509576 UBOX5O94941 541 aa11.33□□□□□ -0.6
DDX41-210ENST00000509576 SLC2A10O95528 541 aa11.33□□□□□ -0.6
DDX41-210ENST00000509576 IGHV3-13P01766 116 aa11.33□□□□□ -0.6
DDX41-210ENST00000509576 F13BP05160 661 aa11.33□□□□□ -0.6
DDX41-210ENST00000509576 LCKP06239 509 aa11.33□□□□□ -0.6
DDX41-210ENST00000509576 TSPAN19P0C672 248 aa11.33□□□□□ -0.6
DDX41-210ENST00000509576 FUT1P19526 365 aa11.33□□□□□ -0.6
DDX41-210ENST00000509576 TNFRSF1BP20333 461 aa11.33□□□□□ -0.6
DDX41-210ENST00000509576 SLC6A2P23975 617 aa11.33□□□□□ -0.6
DDX41-210ENST00000509576 UGT2B15P54855 530 aa11.33□□□□□ -0.6
DDX41-210ENST00000509576 MTPNP58546 118 aa11.33□□□□□ -0.6
DDX41-210ENST00000509576 NCALDP61601 193 aa11.33□□□□□ -0.6
DDX41-210ENST00000509576 UBA52P62987 128 aaKnown RBP11.33□□□□□ -0.6
DDX41-210ENST00000509576 FMODQ06828 376 aa11.33□□□□□ -0.6
DDX41-210ENST00000509576 RPL18Q07020 188 aaKnown RBP11.33□□□□□ -0.6
DDX41-210ENST00000509576 KLF17Q5JT82 389 aaPredicted RBP11.33□□□□□ -0.6
DDX41-210ENST00000509576 SHQ1Q6PI26 577 aaKnown RBP11.33□□□□□ -0.6
DDX41-210ENST00000509576 RFPL4BQ6ZWI9 263 aa11.33□□□□□ -0.6
DDX41-210ENST00000509576 KRT73Q86Y46 540 aa11.33□□□□□ -0.6
DDX41-210ENST00000509576 BCL6BQ8N143 479 aaPredicted RBP11.33□□□□□ -0.6
DDX41-210ENST00000509576 LRRC18Q8N456 261 aa11.33□□□□□ -0.6
DDX41-210ENST00000509576 CLDN22Q8N7P3 220 aa11.33□□□□□ -0.6
DDX41-210ENST00000509576 C3orf56Q8N813 242 aa11.33□□□□□ -0.6
DDX41-210ENST00000509576 SYT14Q8NB59 555 aa11.33□□□□□ -0.6
DDX41-210ENST00000509576 NOXO1Q8NFA2 376 aa11.33□□□□□ -0.6
DDX41-210ENST00000509576 MOSPD2Q8NHP6 518 aa11.33□□□□□ -0.6
DDX41-210ENST00000509576 PFN4Q8NHR9 129 aa11.33□□□□□ -0.6
DDX41-210ENST00000509576 ZNF519Q8TB69 540 aa11.33□□□□□ -0.6
DDX41-210ENST00000509576 IPCEF1Q8WWN9 437 aaPredicted RBP11.33□□□□□ -0.6
DDX41-210ENST00000509576 ASB10Q8WXI3 467 aa11.33□□□□□ -0.6
DDX41-210ENST00000509576 HDAC2Q92769 488 aaKnown RBP11.33□□□□□ -0.6
DDX41-210ENST00000509576 GCDHQ92947 438 aaPredicted RBP11.33□□□□□ -0.6
DDX41-210ENST00000509576 ZNF566Q969W8 418 aa11.33□□□□□ -0.6
DDX41-210ENST00000509576 MARS2Q96GW9 593 aaKnown RBP11.33□□□□□ -0.6
DDX41-210ENST00000509576 POM121L2Q96KW2 1035 aa11.33□□□□□ -0.6
DDX41-210ENST00000509576 ZNF48Q96MX3 618 aaPredicted RBP11.33□□□□□ -0.6
DDX41-210ENST00000509576 SPATA5L1Q9BVQ7 753 aa11.33□□□□□ -0.6
DDX41-210ENST00000509576 PCDHAC1Q9H158 963 aa11.33□□□□□ -0.6
DDX41-210ENST00000509576 POFUT1Q9H488 388 aa11.33□□□□□ -0.6
DDX41-210ENST00000509576 TMBIM4Q9HC24 238 aa11.33□□□□□ -0.6
DDX41-210ENST00000509576 MMP26Q9NRE1 261 aa11.33□□□□□ -0.6
DDX41-210ENST00000509576 C20orf141Q9NUB4 165 aa11.33□□□□□ -0.6
DDX41-210ENST00000509576 ZNF346Q9UL40 294 aaKnown RBP11.33□□□□□ -0.6
DDX41-210ENST00000509576 SLC7A7Q9UM01 511 aa11.33□□□□□ -0.6
DDX41-210ENST00000509576 PCDHGB1Q9Y5G3 927 aa11.33□□□□□ -0.6
DDX41-210ENST00000509576 SOX21Q9Y651 276 aaPredicted RBP11.33□□□□□ -0.6
DDX41-210ENST00000509576 TMPRSS2O15393 492 aa11.32□□□□□ -0.6
DDX41-210ENST00000509576 RNF13O43567 381 aa11.32□□□□□ -0.6
DDX41-210ENST00000509576 ZNF32P17041 273 aa11.32□□□□□ -0.6
DDX41-210ENST00000509576 SEC61A1P61619 476 aaKnown RBP11.32□□□□□ -0.6
DDX41-210ENST00000509576 AGKQ53H12 422 aa11.32□□□□□ -0.6
DDX41-210ENST00000509576 PABPC1L2AQ5JQF8 200 aa11.32□□□□□ -0.6
DDX41-210ENST00000509576 ARMC4Q5T2S8 1044 aa11.32□□□□□ -0.6
DDX41-210ENST00000509576 REP15Q6BDI9 236 aa11.32□□□□□ -0.6
DDX41-210ENST00000509576 RANBP3LQ86VV4 465 aaPredicted RBP11.32□□□□□ -0.6
DDX41-210ENST00000509576 NKAIN4Q8IVV8 208 aa11.32□□□□□ -0.6
DDX41-210ENST00000509576 ICA1LQ8NDH6 482 aa11.32□□□□□ -0.6
DDX41-210ENST00000509576 DEFB108BQ8NET1 73 aa11.32□□□□□ -0.6
DDX41-210ENST00000509576 AKR7LQ8NHP1 331 aa11.32□□□□□ -0.6
DDX41-210ENST00000509576 GEMIN6Q8WXD5 167 aaKnown RBP11.32□□□□□ -0.6
DDX41-210ENST00000509576 LRRC58Q96CX6 371 aa11.32□□□□□ -0.6
DDX41-210ENST00000509576 C7orf26Q96N11 449 aa11.32□□□□□ -0.6
DDX41-210ENST00000509576 DUX5Q96PT3 197 aa11.32□□□□□ -0.6
DDX41-210ENST00000509576 CDH20Q9HBT6 801 aa11.32□□□□□ -0.6
DDX41-210ENST00000509576 NPHS2Q9NP85 383 aa11.32□□□□□ -0.6
DDX41-210ENST00000509576 NANSQ9NR45 359 aa11.32□□□□□ -0.6
DDX41-210ENST00000509576 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.32□□□□□ -0.6
DDX41-210ENST00000509576 LEF1Q9UJU2 399 aaPredicted RBP11.32□□□□□ -0.6
DDX41-210ENST00000509576 PPIAL4AQ9Y536 164 aa11.32□□□□□ -0.6
DDX41-210ENST00000509576 WNK1Q9H4A3 2382 aa11.31□□□□□ -0.6
DDX41-210ENST00000509576 PRORSD1PA6NEY8 169 aa11.31□□□□□ -0.6
DDX41-210ENST00000509576 TRAPPC2LH3BP13 241 aa11.31□□□□□ -0.6
DDX41-210ENST00000509576 TRIM77I1YAP6 450 aa11.31□□□□□ -0.6
DDX41-210ENST00000509576 SPRY3O43610 288 aa11.31□□□□□ -0.6
DDX41-210ENST00000509576 SHOX2O60902 331 aaPredicted RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms