RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 HMGA2P52926 109 aa13.97□□□□□ -0.17
PDLIM5-212ENST00000509333 CHRNB3Q05901 458 aa13.97□□□□□ -0.17
PDLIM5-212ENST00000509333 NPRL3Q12980 569 aa13.97□□□□□ -0.17
PDLIM5-212ENST00000509333 TNK1Q13470 666 aa13.97□□□□□ -0.17
PDLIM5-212ENST00000509333 ADIPOQQ15848 244 aa13.97□□□□□ -0.17
PDLIM5-212ENST00000509333 ETFDHQ16134 617 aa13.97□□□□□ -0.17
PDLIM5-212ENST00000509333 CLEC12BQ2HXU8 276 aa13.97□□□□□ -0.17
PDLIM5-212ENST00000509333 THEM4Q5T1C6 240 aa13.97□□□□□ -0.17
PDLIM5-212ENST00000509333 HDDC2Q7Z4H3 204 aa13.97□□□□□ -0.17
PDLIM5-212ENST00000509333 ZER1Q7Z7L7 766 aa13.97□□□□□ -0.17
PDLIM5-212ENST00000509333 IGFN1Q86VF2 1251 aa13.97□□□□□ -0.17
PDLIM5-212ENST00000509333 ARHGAP24Q8N264 748 aa13.97□□□□□ -0.17
PDLIM5-212ENST00000509333 ARIH2OSQ8N7S6 290 aa13.97□□□□□ -0.17
PDLIM5-212ENST00000509333 NUP37Q8NFH4 326 aa13.97□□□□□ -0.17
PDLIM5-212ENST00000509333 OR4K5Q8NGD3 323 aa13.97□□□□□ -0.17
PDLIM5-212ENST00000509333 OR52J3Q8NH60 311 aa13.97□□□□□ -0.17
PDLIM5-212ENST00000509333 HTRA1Q92743 480 aa13.97□□□□□ -0.17
PDLIM5-212ENST00000509333 GPA33Q99795 319 aa13.97□□□□□ -0.17
PDLIM5-212ENST00000509333 ALG12Q9BV10 488 aa13.97□□□□□ -0.17
PDLIM5-212ENST00000509333 SIAEQ9HAT2 523 aa13.97□□□□□ -0.17
PDLIM5-212ENST00000509333 TMEM5Q9Y2B1 443 aa13.97□□□□□ -0.17
PDLIM5-212ENST00000509333 UGT2A1Q9Y4X1 527 aa13.97□□□□□ -0.17
PDLIM5-212ENST00000509333 V9GYQ6 96 aa13.97□□□□□ -0.17
PDLIM5-212ENST00000509333 TMEM129A0AVI4 362 aa13.96□□□□□ -0.17
PDLIM5-212ENST00000509333 SH3PXD2BA1X283 911 aa13.96□□□□□ -0.17
PDLIM5-212ENST00000509333 UBL3O95164 117 aa13.96□□□□□ -0.17
PDLIM5-212ENST00000509333 CD14P08571 375 aa13.96□□□□□ -0.17
PDLIM5-212ENST00000509333 OR4A8P0C604 315 aa13.96□□□□□ -0.17
PDLIM5-212ENST00000509333 LIMS1P48059 325 aa13.96□□□□□ -0.17
PDLIM5-212ENST00000509333 PTDSS1P48651 473 aaKnown RBP13.96□□□□□ -0.17
PDLIM5-212ENST00000509333 ZNF84P51523 738 aa13.96□□□□□ -0.17
PDLIM5-212ENST00000509333 SMIM11AP58511 58 aa13.96□□□□□ -0.17
PDLIM5-212ENST00000509333 ERVK-25P63136 954 aa13.96□□□□□ -0.17
PDLIM5-212ENST00000509333 TRIM25Q14258 630 aaKnown RBP13.96□□□□□ -0.17
PDLIM5-212ENST00000509333 RAB39AQ14964 217 aa13.96□□□□□ -0.17
PDLIM5-212ENST00000509333 RAB35Q15286 201 aa13.96□□□□□ -0.17
PDLIM5-212ENST00000509333 BIVMQ86UB2 503 aa13.96□□□□□ -0.17
PDLIM5-212ENST00000509333 ZNF584Q8IVC4 421 aa13.96□□□□□ -0.17
PDLIM5-212ENST00000509333 CLDN22Q8N7P3 220 aa13.96□□□□□ -0.17
PDLIM5-212ENST00000509333 NOXO1Q8NFA2 376 aa13.96□□□□□ -0.17
PDLIM5-212ENST00000509333 ZNF519Q8TB69 540 aa13.96□□□□□ -0.17
PDLIM5-212ENST00000509333 NANOS1Q8WY41 292 aaKnown RBP13.96□□□□□ -0.17
PDLIM5-212ENST00000509333 FBXO17Q96EF6 278 aa13.96□□□□□ -0.17
PDLIM5-212ENST00000509333 FAM46AQ96IP4 442 aaKnown RBP13.96□□□□□ -0.17
PDLIM5-212ENST00000509333 COX4I2Q96KJ9 171 aa13.96□□□□□ -0.17
PDLIM5-212ENST00000509333 TSPAN32Q96QS1 320 aa13.96□□□□□ -0.17
PDLIM5-212ENST00000509333 DOK1Q99704 481 aa13.96□□□□□ -0.17
PDLIM5-212ENST00000509333 C1orf21Q9H246 121 aa13.96□□□□□ -0.17
PDLIM5-212ENST00000509333 SMURF2Q9HAU4 748 aa13.96□□□□□ -0.17
PDLIM5-212ENST00000509333 SIGLEC7Q9Y286 467 aa13.96□□□□□ -0.17
PDLIM5-212ENST00000509333 PMF1-BGLAPU3KQ54 211 aa13.96□□□□□ -0.17
PDLIM5-212ENST00000509333 ZANQ9Y493 2812 aa13.96□□□□□ -0.18
PDLIM5-212ENST00000509333 TLN2Q9Y4G6 2542 aa13.95□□□□□ -0.18
PDLIM5-212ENST00000509333 VSTM5A8MXK1 200 aa13.95□□□□□ -0.18
PDLIM5-212ENST00000509333 B9A039 149 aa13.95□□□□□ -0.18
PDLIM5-212ENST00000509333 H7C417 338 aa13.95□□□□□ -0.18
PDLIM5-212ENST00000509333 ENTPD5O75356 428 aa13.95□□□□□ -0.18
PDLIM5-212ENST00000509333 FARS2O95363 451 aaKnown RBP13.95□□□□□ -0.18
PDLIM5-212ENST00000509333 SLC2A10O95528 541 aa13.95□□□□□ -0.18
PDLIM5-212ENST00000509333 BMP4P12644 408 aa13.95□□□□□ -0.18
PDLIM5-212ENST00000509333 MRPS34P82930 218 aaKnown RBP13.95□□□□□ -0.18
PDLIM5-212ENST00000509333 FMODQ06828 376 aa13.95□□□□□ -0.18
PDLIM5-212ENST00000509333 TOP3AQ13472 1001 aaPredicted RBP13.95□□□□□ -0.18
PDLIM5-212ENST00000509333 EFNB3Q15768 340 aa13.95□□□□□ -0.18
PDLIM5-212ENST00000509333 FGD3Q5JSP0 725 aa13.95□□□□□ -0.18
PDLIM5-212ENST00000509333 FAM27BQ5VT28 67 aa13.95□□□□□ -0.18
PDLIM5-212ENST00000509333 VHLLQ6RSH7 139 aa13.95□□□□□ -0.18
PDLIM5-212ENST00000509333 CYP2R1Q6VVX0 501 aa13.95□□□□□ -0.18
PDLIM5-212ENST00000509333 DPPA2Q7Z7J5 298 aa13.95□□□□□ -0.18
PDLIM5-212ENST00000509333 BCAS4Q8TDM0 211 aa13.95□□□□□ -0.18
PDLIM5-212ENST00000509333 MCUR1Q96AQ8 359 aa13.95□□□□□ -0.18
PDLIM5-212ENST00000509333 Q96M85 177 aa13.95□□□□□ -0.18
PDLIM5-212ENST00000509333 ZNF442Q9H7R0 627 aa13.95□□□□□ -0.18
PDLIM5-212ENST00000509333 BARX1Q9HBU1 254 aaPredicted RBP13.95□□□□□ -0.18
PDLIM5-212ENST00000509333 C2CD3Q4AC94 2353 aa13.95□□□□□ -0.18
PDLIM5-212ENST00000509333 TCRBV5S2A0A599 114 aa13.94□□□□□ -0.18
PDLIM5-212ENST00000509333 A6NIZ1 184 aa13.94□□□□□ -0.18
PDLIM5-212ENST00000509333 SSX4O60224 188 aa13.94□□□□□ -0.18
PDLIM5-212ENST00000509333 PDE5AO76074 875 aa13.94□□□□□ -0.18
PDLIM5-212ENST00000509333 GADD45GO95257 159 aa13.94□□□□□ -0.18
PDLIM5-212ENST00000509333 RAB36O95755 333 aa13.94□□□□□ -0.18
PDLIM5-212ENST00000509333 FABP3P05413 133 aa13.94□□□□□ -0.18
PDLIM5-212ENST00000509333 MMP7P09237 267 aaPredicted RBP13.94□□□□□ -0.18
PDLIM5-212ENST00000509333 ATP6V1B2P21281 511 aa13.94□□□□□ -0.18
PDLIM5-212ENST00000509333 CDAP32320 146 aa13.94□□□□□ -0.18
PDLIM5-212ENST00000509333 RPL4P36578 427 aaKnown RBP13.94□□□□□ -0.18
PDLIM5-212ENST00000509333 FXYD6P3P58550 94 aa13.94□□□□□ -0.18
PDLIM5-212ENST00000509333 RAP1BP61224 184 aa13.94□□□□□ -0.18
PDLIM5-212ENST00000509333 RAP1AP62834 184 aa13.94□□□□□ -0.18
PDLIM5-212ENST00000509333 DAG1Q14118 895 aa13.94□□□□□ -0.18
PDLIM5-212ENST00000509333 FAM205BPQ63HN1 556 aa13.94□□□□□ -0.18
PDLIM5-212ENST00000509333 THSD4Q6ZMP0 1018 aa13.94□□□□□ -0.18
PDLIM5-212ENST00000509333 SLC16A14Q7RTX9 510 aa13.94□□□□□ -0.18
PDLIM5-212ENST00000509333 TRPM8Q7Z2W7 1104 aa13.94□□□□□ -0.18
PDLIM5-212ENST00000509333 FAM122BQ7Z309 247 aa13.94□□□□□ -0.18
PDLIM5-212ENST00000509333 OR10H5Q8NGA6 315 aa13.94□□□□□ -0.18
PDLIM5-212ENST00000509333 FNDC8Q8TC99 324 aa13.94□□□□□ -0.18
PDLIM5-212ENST00000509333 NSMAFQ92636 917 aa13.94□□□□□ -0.18
PDLIM5-212ENST00000509333 NABP1Q96AH0 204 aa13.94□□□□□ -0.18
PDLIM5-212ENST00000509333 PLK3Q9H4B4 646 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms