RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 TPK1Q9H3S4 243 aa13.95□□□□□ -0.18
LMNA-222ENST00000508500 DENND2DQ9H6A0 471 aaPredicted RBP13.95□□□□□ -0.18
LMNA-222ENST00000508500 CMAHPQ9Y471 501 aa13.95□□□□□ -0.18
LMNA-222ENST00000508500 RNF212BA8MTL3 300 aa13.94□□□□□ -0.18
LMNA-222ENST00000508500 LILRA1O75019 489 aa13.94□□□□□ -0.18
LMNA-222ENST00000508500 OR7A10O76100 309 aa13.94□□□□□ -0.18
LMNA-222ENST00000508500 BCL10O95999 233 aa13.94□□□□□ -0.18
LMNA-222ENST00000508500 SERPINA5P05154 406 aa13.94□□□□□ -0.18
LMNA-222ENST00000508500 APEHP13798 732 aaKnown RBP13.94□□□□□ -0.18
LMNA-222ENST00000508500 ZNF23P17027 643 aa13.94□□□□□ -0.18
LMNA-222ENST00000508500 AQP2P41181 271 aa13.94□□□□□ -0.18
LMNA-222ENST00000508500 NUDT2P50583 147 aa13.94□□□□□ -0.18
LMNA-222ENST00000508500 MYBPC1Q00872 1141 aa13.94□□□□□ -0.18
LMNA-222ENST00000508500 CYBRD1Q53TN4 286 aa13.94□□□□□ -0.18
LMNA-222ENST00000508500 NANOGNBQ7Z5D8 188 aa13.94□□□□□ -0.18
LMNA-222ENST00000508500 ZNF786Q8N393 782 aa13.94□□□□□ -0.18
LMNA-222ENST00000508500 PAQR4Q8N4S7 273 aaPredicted RBP13.94□□□□□ -0.18
LMNA-222ENST00000508500 MOSPD2Q8NHP6 518 aa13.94□□□□□ -0.18
LMNA-222ENST00000508500 LIPHQ8WWY8 451 aa13.94□□□□□ -0.18
LMNA-222ENST00000508500 ASB10Q8WXI3 467 aa13.94□□□□□ -0.18
LMNA-222ENST00000508500 MCHR2Q969V1 340 aa13.94□□□□□ -0.18
LMNA-222ENST00000508500 RCN3Q96D15 328 aa13.94□□□□□ -0.18
LMNA-222ENST00000508500 SYT3Q9BQG1 590 aa13.94□□□□□ -0.18
LMNA-222ENST00000508500 CADM1Q9BY67 442 aaKnown RBP13.94□□□□□ -0.18
LMNA-222ENST00000508500 CMTM6Q9NX76 183 aa13.94□□□□□ -0.18
LMNA-222ENST00000508500 CDC42EP3Q9UKI2 254 aa13.94□□□□□ -0.18
LMNA-222ENST00000508500 BAG5Q9UL15 447 aa13.94□□□□□ -0.18
LMNA-222ENST00000508500 FZR1Q9UM11 496 aa13.94□□□□□ -0.18
LMNA-222ENST00000508500 AP3M1Q9Y2T2 418 aa13.94□□□□□ -0.18
LMNA-222ENST00000508500 IGKV1D-43A0A0B4J1Z2 117 aa13.93□□□□□ -0.18
LMNA-222ENST00000508500 VSTM5A8MXK1 200 aa13.93□□□□□ -0.18
LMNA-222ENST00000508500 FAM220BPB1ANY3 271 aa13.93□□□□□ -0.18
LMNA-222ENST00000508500 H0YHG0 523 aa13.93□□□□□ -0.18
LMNA-222ENST00000508500 PIP5K1CO60331 668 aa13.93□□□□□ -0.18
LMNA-222ENST00000508500 TRMUO75648 421 aaKnown RBP13.93□□□□□ -0.18
LMNA-222ENST00000508500 OR5F1O95221 314 aa13.93□□□□□ -0.18
LMNA-222ENST00000508500 RAB36O95755 333 aa13.93□□□□□ -0.18
LMNA-222ENST00000508500 IGF2P01344 180 aa13.93□□□□□ -0.18
LMNA-222ENST00000508500 HIST1H2ABP04908 130 aa13.93□□□□□ -0.18
LMNA-222ENST00000508500 TACSTD2P09758 323 aa13.93□□□□□ -0.18
LMNA-222ENST00000508500 OR8G3PP0DMU2 310 aa13.93□□□□□ -0.18
LMNA-222ENST00000508500 CCL2P13500 99 aa13.93□□□□□ -0.18
LMNA-222ENST00000508500 KDELR2P33947 212 aa13.93□□□□□ -0.18
LMNA-222ENST00000508500 RBM34P42696 430 aaKnown RBP13.93□□□□□ -0.18
LMNA-222ENST00000508500 EVX1P49640 407 aa13.93□□□□□ -0.18
LMNA-222ENST00000508500 ZNF133P52736 654 aaPredicted RBP13.93□□□□□ -0.18
LMNA-222ENST00000508500 TAS2R41P59536 307 aa13.93□□□□□ -0.18
LMNA-222ENST00000508500 RIN1Q13671 783 aa13.93□□□□□ -0.18
LMNA-222ENST00000508500 LAPTM4AQ15012 233 aa13.93□□□□□ -0.18
LMNA-222ENST00000508500 MAD2L1BPQ15013 274 aaPredicted RBP13.93□□□□□ -0.18
LMNA-222ENST00000508500 TRIP10Q15642 601 aa13.93□□□□□ -0.18
LMNA-222ENST00000508500 ARMC4Q5T2S8 1044 aa13.93□□□□□ -0.18
LMNA-222ENST00000508500 ERICH5Q6P6B1 374 aa13.93□□□□□ -0.18
LMNA-222ENST00000508500 IL17RELQ6ZVW7 336 aa13.93□□□□□ -0.18
LMNA-222ENST00000508500 HIST3H2AQ7L7L0 130 aa13.93□□□□□ -0.18
LMNA-222ENST00000508500 ARPINQ7Z6K5 226 aa13.93□□□□□ -0.18
LMNA-222ENST00000508500 OR4K5Q8NGD3 323 aa13.93□□□□□ -0.18
LMNA-222ENST00000508500 UBASH3BQ8TF42 649 aa13.93□□□□□ -0.18
LMNA-222ENST00000508500 TMEM239Q8WW34 195 aa13.93□□□□□ -0.18
LMNA-222ENST00000508500 HIST1H2ACQ93077 130 aa13.93□□□□□ -0.18
LMNA-222ENST00000508500 NMD3Q96D46 503 aaKnown RBP13.93□□□□□ -0.18
LMNA-222ENST00000508500 SGTBQ96EQ0 304 aa13.93□□□□□ -0.18
LMNA-222ENST00000508500 DYNLRB1Q9NP97 96 aa13.93□□□□□ -0.18
LMNA-222ENST00000508500 FBXO9Q9UK97 447 aaPredicted RBP13.93□□□□□ -0.18
LMNA-222ENST00000508500 A4GNTQ9UNA3 340 aa13.93□□□□□ -0.18
LMNA-222ENST00000508500 LOC100289279A0A1B0GTE1 492 aa13.92□□□□□ -0.18
LMNA-222ENST00000508500 SYNGR3O43761 229 aa13.92□□□□□ -0.18
LMNA-222ENST00000508500 HPXP02790 462 aa13.92□□□□□ -0.18
LMNA-222ENST00000508500 MMP7P09237 267 aaPredicted RBP13.92□□□□□ -0.18
LMNA-222ENST00000508500 TCN1P20061 433 aaPredicted RBP13.92□□□□□ -0.18
LMNA-222ENST00000508500 ALDH3B1P43353 468 aa13.92□□□□□ -0.18
LMNA-222ENST00000508500 IQCCQ4KMZ1 466 aa13.92□□□□□ -0.18
LMNA-222ENST00000508500 LRRC23Q53EV4 343 aaPredicted RBP13.92□□□□□ -0.18
LMNA-222ENST00000508500 ELFN2Q5R3F8 820 aa13.92□□□□□ -0.18
LMNA-222ENST00000508500 C8orf82Q6P1X6 216 aaPredicted RBP13.92□□□□□ -0.18
LMNA-222ENST00000508500 SYT14Q8NB59 555 aa13.92□□□□□ -0.18
LMNA-222ENST00000508500 NOXO1Q8NFA2 376 aa13.92□□□□□ -0.18
LMNA-222ENST00000508500 HDAC2Q92769 488 aaKnown RBP13.92□□□□□ -0.18
LMNA-222ENST00000508500 BEX2Q9BXY8 128 aa13.92□□□□□ -0.18
LMNA-222ENST00000508500 POLR2J2Q9GZM3 115 aaKnown RBP13.92□□□□□ -0.18
LMNA-222ENST00000508500 POLR2J3Q9H1A7 115 aaKnown RBP13.92□□□□□ -0.18
LMNA-222ENST00000508500 CHODLQ9H9P2 273 aa13.92□□□□□ -0.18
LMNA-222ENST00000508500 UGT2A1Q9Y4X1 527 aa13.92□□□□□ -0.18
LMNA-222ENST00000508500 SNX13Q9Y5W8 968 aa13.92□□□□□ -0.18
LMNA-222ENST00000508500 ARHGAP32A7KAX9 2087 aa13.91□□□□□ -0.18
LMNA-222ENST00000508500 SLC2A10O95528 541 aa13.91□□□□□ -0.18
LMNA-222ENST00000508500 CLPTM1O96005 669 aa13.91□□□□□ -0.18
LMNA-222ENST00000508500 IFNA2P01563 188 aa13.91□□□□□ -0.18
LMNA-222ENST00000508500 IGHG1P01857 330 aa13.91□□□□□ -0.18
LMNA-222ENST00000508500 ACADSP16219 412 aa13.91□□□□□ -0.18
LMNA-222ENST00000508500 COL8A2P25067 703 aa13.91□□□□□ -0.18
LMNA-222ENST00000508500 CLRN1P58418 232 aa13.91□□□□□ -0.18
LMNA-222ENST00000508500 ERVS71-1P61550 626 aa13.91□□□□□ -0.18
LMNA-222ENST00000508500 SELENOWP63302 87 aa13.91□□□□□ -0.18
LMNA-222ENST00000508500 FAM120AOSQ5T036 256 aa13.91□□□□□ -0.18
LMNA-222ENST00000508500 FAM166AQ6J272 317 aa13.91□□□□□ -0.18
LMNA-222ENST00000508500 PGM2L1Q6PCE3 622 aa13.91□□□□□ -0.18
LMNA-222ENST00000508500 SLC15A3Q8IY34 581 aa13.91□□□□□ -0.18
LMNA-222ENST00000508500 MICU2Q8IYU8 434 aa13.91□□□□□ -0.18
LMNA-222ENST00000508500 DEFB107AQ8IZN7 70 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms