RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 TMEM174Q8WUU8 243 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 SLC38A5Q8WUX1 472 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 UPRTQ96BW1 309 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 RHOVQ96L33 236 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 NSUN5Q96P11 429 aaKnown RBP2.7□□□□□ -1.98
NEDD4-208ENST00000508342 TTTY12Q9BZ98 90 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 QRSL1Q9H0R6 528 aaKnown RBP2.7□□□□□ -1.98
NEDD4-208ENST00000508342 MMP25Q9NPA2 562 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 C12orf4Q9NQ89 552 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 SLC35A3Q9Y2D2 325 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 PLLPQ9Y342 182 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 TNCP24821 2201 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 TRBV2A0A0J9YWF9 115 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 A0A1W2PR77 199 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 SLC5A10A0PJK1 596 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 GABARAPH6UMI1 98 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 SYT7O43581 403 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 RGS11O94810 467 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 GABARAPO95166 117 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 ACTL6AO96019 429 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 IGHV3-9P01782 118 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 IGHG1P01857 330 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 SERPINA7P05543 415 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 LINC00271P0C7V0 271 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 APEHP13798 732 aaKnown RBP2.69□□□□□ -1.98
NEDD4-208ENST00000508342 ETFAP13804 333 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 ELK4P28324 431 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 PTGER1P34995 402 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 EIF1P41567 113 aaKnown RBP2.69□□□□□ -1.98
NEDD4-208ENST00000508342 TAS2R43P59537 309 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 MESP2Q0VG99 397 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 YIF1BQ5BJH7 314 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 MTX3Q5HYI7 312 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 TOR2AQ5JU69 321 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.69□□□□□ -1.98
NEDD4-208ENST00000508342 C6orf183Q5T699 404 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 PLCXD3Q63HM9 321 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 PODNL1Q6PEZ8 512 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 TMEM108Q6UXF1 575 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 AHSA2Q719I0 299 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 AMIGO2Q86SJ2 522 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 ZNF554Q86TJ5 538 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 CPNE8Q86YQ8 564 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 Q8N402 240 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 SLC15A4Q8N697 577 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 NOA1Q8NC60 698 aaKnown RBP2.69□□□□□ -1.98
NEDD4-208ENST00000508342 OR13C2Q8NGS9 318 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 ZNF417Q8TAU3 575 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 THAP6Q8TBB0 222 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 FANK1Q8TC84 345 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 NT5CQ8TCD5 201 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 UBTD2Q8WUN7 234 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 DAZAP1Q96EP5 407 aaKnown RBP2.69□□□□□ -1.98
NEDD4-208ENST00000508342 LINC00615Q96LM1 132 aaPredicted RBP2.69□□□□□ -1.98
NEDD4-208ENST00000508342 IL4I1Q96RQ9 567 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 ZNF587Q96SQ5 575 aaPredicted RBP2.69□□□□□ -1.98
NEDD4-208ENST00000508342 SYT4Q9H2B2 425 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 MYNNQ9NPC7 610 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 LANCL2Q9NS86 450 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 SLC6A13Q9NSD5 602 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 TMEM30AQ9NV96 361 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 SIDT1Q9NXL6 827 aaKnown RBP2.69□□□□□ -1.98
NEDD4-208ENST00000508342 ZKSCAN7Q9P0L1 754 aaPredicted RBP2.69□□□□□ -1.98
NEDD4-208ENST00000508342 PCNX2A6NKB5 2137 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 MN1Q10571 1320 aaPredicted RBP2.69□□□□□ -1.98
NEDD4-208ENST00000508342 ZSCAN5BA6NJL1 495 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 DISC1C4P0D8 188 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 SMAD9O15198 467 aaKnown RBP2.69□□□□□ -1.98
NEDD4-208ENST00000508342 CREBL2O60519 120 aaPredicted RBP2.69□□□□□ -1.98
NEDD4-208ENST00000508342 NPPAP01160 153 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 CT45A6P0DMU7 189 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 CT45A5P0DMU8 189 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 CT45A7P0DMV0 189 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 CT45A8P0DMV1 189 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 CT45A9P0DMV2 189 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 CD99P14209 185 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 MMP11P24347 488 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 ELAVL4P26378 380 aaKnown RBP2.69□□□□□ -1.98
NEDD4-208ENST00000508342 CSF2RBP32927 897 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 UGT2B10P36537 528 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 FRKP42685 505 aaPredicted RBP2.69□□□□□ -1.98
NEDD4-208ENST00000508342 ASCL1P50553 236 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 CCR9P51686 369 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 MLF1P58340 268 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 PRPS1P60891 318 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 CSNK1G2P78368 415 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 PLAURQ03405 335 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 RNPS1Q15287 305 aaKnown RBP2.69□□□□□ -1.98
NEDD4-208ENST00000508342 GRK1Q15835 563 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 CT45A2Q5DJT8 189 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 CT45A1Q5HYN5 189 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 ZNF773Q6PK81 442 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 ZNF321PQ8N8H1 164 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 CDRT4Q8N9R6 151 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 TMEM185AQ8NFB2 350 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 STEAP2Q8NFT2 490 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 OR10X1Q8NGY0 326 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 CT45A3Q8NHU0 189 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 CHPT1Q8WUD6 406 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 PTP4A1Q93096 173 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms