RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 MSI2Q96DH6 328 aaKnown RBP12.28□□□□□ -0.44
RAB28-205ENST00000508274 OR51B6Q9H340 312 aa12.28□□□□□ -0.44
RAB28-205ENST00000508274 RNF121Q9H920 327 aa12.28□□□□□ -0.44
RAB28-205ENST00000508274 SLC7A8Q9UHI5 535 aa12.28□□□□□ -0.44
RAB28-205ENST00000508274 SPEF1Q9Y4P9 236 aa12.28□□□□□ -0.44
RAB28-205ENST00000508274 LRP5LA4QPB2 252 aa12.27□□□□□ -0.44
RAB28-205ENST00000508274 M0R233 179 aa12.27□□□□□ -0.44
RAB28-205ENST00000508274 FFAR1O14842 300 aa12.27□□□□□ -0.44
RAB28-205ENST00000508274 FARS2O95363 451 aaKnown RBP12.27□□□□□ -0.44
RAB28-205ENST00000508274 ZNF682O95780 498 aa12.27□□□□□ -0.44
RAB28-205ENST00000508274 FAM157BP0CG42 384 aa12.27□□□□□ -0.44
RAB28-205ENST00000508274 IFI30P13284 250 aa12.27□□□□□ -0.44
RAB28-205ENST00000508274 TCN1P20061 433 aaPredicted RBP12.27□□□□□ -0.44
RAB28-205ENST00000508274 MAKP20794 623 aa12.27□□□□□ -0.44
RAB28-205ENST00000508274 IGFBP5P24593 272 aa12.27□□□□□ -0.44
RAB28-205ENST00000508274 DAP3P51398 398 aaKnown RBP12.27□□□□□ -0.44
RAB28-205ENST00000508274 SEC24CP53992 1094 aa12.27□□□□□ -0.44
RAB28-205ENST00000508274 TOP3AQ13472 1001 aaPredicted RBP12.27□□□□□ -0.44
RAB28-205ENST00000508274 C8orf82Q6P1X6 216 aaPredicted RBP12.27□□□□□ -0.44
RAB28-205ENST00000508274 IL17RELQ6ZVW7 336 aa12.27□□□□□ -0.44
RAB28-205ENST00000508274 SLC16A14Q7RTX9 510 aa12.27□□□□□ -0.44
RAB28-205ENST00000508274 IGFN1Q86VF2 1251 aa12.27□□□□□ -0.44
RAB28-205ENST00000508274 CLDN22Q8N7P3 220 aa12.27□□□□□ -0.44
RAB28-205ENST00000508274 SLC30A7Q8NEW0 376 aa12.27□□□□□ -0.44
RAB28-205ENST00000508274 BPIFA2Q96DR5 249 aa12.27□□□□□ -0.44
RAB28-205ENST00000508274 CHODLQ9H9P2 273 aa12.27□□□□□ -0.44
RAB28-205ENST00000508274 MED4Q9NPJ6 270 aa12.27□□□□□ -0.44
RAB28-205ENST00000508274 FBXO9Q9UK97 447 aaPredicted RBP12.27□□□□□ -0.44
RAB28-205ENST00000508274 FBXL3Q9UKT7 428 aa12.27□□□□□ -0.44
RAB28-205ENST00000508274 HIF3AQ9Y2N7 669 aa12.27□□□□□ -0.44
RAB28-205ENST00000508274 TRAV27A0A087WT01 109 aa12.26□□□□□ -0.45
RAB28-205ENST00000508274 CXCR6O00574 342 aa12.26□□□□□ -0.45
RAB28-205ENST00000508274 SYNGR3O43761 229 aa12.26□□□□□ -0.45
RAB28-205ENST00000508274 LMX1BO60663 402 aa12.26□□□□□ -0.45
RAB28-205ENST00000508274 ERCC1P07992 297 aaPredicted RBP12.26□□□□□ -0.45
RAB28-205ENST00000508274 MMP7P09237 267 aaPredicted RBP12.26□□□□□ -0.45
RAB28-205ENST00000508274 ZNF23P17027 643 aa12.26□□□□□ -0.45
RAB28-205ENST00000508274 IL2RGP31785 369 aa12.26□□□□□ -0.45
RAB28-205ENST00000508274 GZMKP49863 264 aa12.26□□□□□ -0.45
RAB28-205ENST00000508274 ZNF84P51523 738 aa12.26□□□□□ -0.45
RAB28-205ENST00000508274 ZNF133P52736 654 aaPredicted RBP12.26□□□□□ -0.45
RAB28-205ENST00000508274 ERVS71-1P61550 626 aa12.26□□□□□ -0.45
RAB28-205ENST00000508274 ALKBH6Q3KRA9 238 aa12.26□□□□□ -0.45
RAB28-205ENST00000508274 ALG10Q5BKT4 473 aa12.26□□□□□ -0.45
RAB28-205ENST00000508274 C10orf128Q5T292 105 aa12.26□□□□□ -0.45
RAB28-205ENST00000508274 CXXC5Q7LFL8 322 aaKnown RBP12.26□□□□□ -0.45
RAB28-205ENST00000508274 NRMQ8IXM6 262 aa12.26□□□□□ -0.45
RAB28-205ENST00000508274 OFCC1Q8IZS5 231 aa12.26□□□□□ -0.45
RAB28-205ENST00000508274 ZNF786Q8N393 782 aa12.26□□□□□ -0.45
RAB28-205ENST00000508274 RBM15BQ8NDT2 890 aaKnown RBP12.26□□□□□ -0.45
RAB28-205ENST00000508274 LZICQ8WZA0 190 aa12.26□□□□□ -0.45
RAB28-205ENST00000508274 NSMAFQ92636 917 aa12.26□□□□□ -0.45
RAB28-205ENST00000508274 NMD3Q96D46 503 aaKnown RBP12.26□□□□□ -0.45
RAB28-205ENST00000508274 REV1Q9UBZ9 1251 aa12.26□□□□□ -0.45
RAB28-205ENST00000508274 CDC42EP3Q9UKI2 254 aa12.26□□□□□ -0.45
RAB28-205ENST00000508274 UGT2A1Q9Y4X1 527 aa12.26□□□□□ -0.45
RAB28-205ENST00000508274 LOC100289279A0A1B0GTE1 492 aa12.26□□□□□ -0.45
RAB28-205ENST00000508274 CENPBD1B2RD01 187 aa12.26□□□□□ -0.45
RAB28-205ENST00000508274 CCDC22O60826 627 aa12.26□□□□□ -0.45
RAB28-205ENST00000508274 IFNW1P05000 195 aa12.26□□□□□ -0.45
RAB28-205ENST00000508274 NCK1P16333 377 aa12.26□□□□□ -0.45
RAB28-205ENST00000508274 GIFP27352 417 aa12.26□□□□□ -0.45
RAB28-205ENST00000508274 EVX1P49640 407 aa12.26□□□□□ -0.45
RAB28-205ENST00000508274 GSK3BP49841 420 aa12.26□□□□□ -0.45
RAB28-205ENST00000508274 NUDT2P50583 147 aa12.26□□□□□ -0.45
RAB28-205ENST00000508274 RPS23P62266 143 aaKnown RBP12.26□□□□□ -0.45
RAB28-205ENST00000508274 CD47Q08722 323 aa12.26□□□□□ -0.45
RAB28-205ENST00000508274 FHL1Q13642 323 aa12.26□□□□□ -0.45
RAB28-205ENST00000508274 RIN1Q13671 783 aa12.26□□□□□ -0.45
RAB28-205ENST00000508274 TRIP10Q15642 601 aa12.26□□□□□ -0.45
RAB28-205ENST00000508274 SLC36A2Q495M3 483 aa12.26□□□□□ -0.45
RAB28-205ENST00000508274 ELFN2Q5R3F8 820 aa12.26□□□□□ -0.45
RAB28-205ENST00000508274 TMEM53Q6P2H8 277 aa12.26□□□□□ -0.45
RAB28-205ENST00000508274 CBLL1Q75N03 491 aa12.26□□□□□ -0.45
RAB28-205ENST00000508274 HDDC2Q7Z4H3 204 aa12.26□□□□□ -0.45
RAB28-205ENST00000508274 UBASH3BQ8TF42 649 aa12.26□□□□□ -0.45
RAB28-205ENST00000508274 GEMIN6Q8WXD5 167 aaKnown RBP12.26□□□□□ -0.45
RAB28-205ENST00000508274 NABP1Q96AH0 204 aa12.26□□□□□ -0.45
RAB28-205ENST00000508274 HSH2DQ96JZ2 352 aa12.26□□□□□ -0.45
RAB28-205ENST00000508274 TSPAN32Q96QS1 320 aa12.26□□□□□ -0.45
RAB28-205ENST00000508274 FNDC11Q9BVV2 318 aa12.26□□□□□ -0.45
RAB28-205ENST00000508274 TXNIPQ9H3M7 391 aa12.26□□□□□ -0.45
RAB28-205ENST00000508274 TMEM160Q9NX00 188 aa12.26□□□□□ -0.45
RAB28-205ENST00000508274 DUSP13Q9UII6 198 aa12.26□□□□□ -0.45
RAB28-205ENST00000508274 A0A1W2PPW3 197 aa12.25□□□□□ -0.45
RAB28-205ENST00000508274 NPIPB13A6NJU9 1138 aa12.25□□□□□ -0.45
RAB28-205ENST00000508274 NPIPB4C9JG80 1138 aa12.25□□□□□ -0.45
RAB28-205ENST00000508274 GSTA4O15217 222 aa12.25□□□□□ -0.45
RAB28-205ENST00000508274 LILRA1O75019 489 aa12.25□□□□□ -0.45
RAB28-205ENST00000508274 ENTPD5O75356 428 aa12.25□□□□□ -0.45
RAB28-205ENST00000508274 PRSS23O95084 383 aa12.25□□□□□ -0.45
RAB28-205ENST00000508274 CLPTM1O96005 669 aa12.25□□□□□ -0.45
RAB28-205ENST00000508274 SERPINA1P01009 418 aa12.25□□□□□ -0.45
RAB28-205ENST00000508274 HPXP02790 462 aa12.25□□□□□ -0.45
RAB28-205ENST00000508274 FAM157CP0CG43 387 aa12.25□□□□□ -0.45
RAB28-205ENST00000508274 SAGP10523 405 aaPredicted RBP12.25□□□□□ -0.45
RAB28-205ENST00000508274 NAT2P11245 290 aa12.25□□□□□ -0.45
RAB28-205ENST00000508274 APEX1P27695 318 aaKnown RBP12.25□□□□□ -0.45
RAB28-205ENST00000508274 LSP1P33241 339 aa12.25□□□□□ -0.45
RAB28-205ENST00000508274 NRN1LQ496H8 165 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms