RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 ENPP1P22413 925 aa7.15□□□□□ -1.26
SCN1A-207ENST00000507401 UQCRC2P22695 453 aa7.15□□□□□ -1.26
SCN1A-207ENST00000507401 CBX5P45973 191 aa7.15□□□□□ -1.26
SCN1A-207ENST00000507401 CARD18P57730 90 aa7.15□□□□□ -1.26
SCN1A-207ENST00000507401 ZNF117Q03924 483 aa7.15□□□□□ -1.26
SCN1A-207ENST00000507401 FAM27E3Q08E93 113 aa7.15□□□□□ -1.26
SCN1A-207ENST00000507401 RIN1Q13671 783 aa7.15□□□□□ -1.26
SCN1A-207ENST00000507401 CD226Q15762 336 aa7.15□□□□□ -1.26
SCN1A-207ENST00000507401 ZNF141Q15928 474 aa7.15□□□□□ -1.26
SCN1A-207ENST00000507401 SLC25A53Q5H9E4 307 aa7.15□□□□□ -1.26
SCN1A-207ENST00000507401 TOR2AQ5JU69 321 aa7.15□□□□□ -1.26
SCN1A-207ENST00000507401 LCN1P1Q5VSP4 162 aa7.15□□□□□ -1.26
SCN1A-207ENST00000507401 OR4F3Q6IEY1 312 aa7.15□□□□□ -1.26
SCN1A-207ENST00000507401 HEPHL1Q6MZM0 1159 aa7.15□□□□□ -1.26
SCN1A-207ENST00000507401 CBLN3Q6UW01 205 aa7.15□□□□□ -1.26
SCN1A-207ENST00000507401 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.15□□□□□ -1.26
SCN1A-207ENST00000507401 NRARPQ7Z6K4 114 aa7.15□□□□□ -1.26
SCN1A-207ENST00000507401 CLDN22Q8N7P3 220 aa7.15□□□□□ -1.26
SCN1A-207ENST00000507401 CELF2-AS1Q8N7Q2 184 aa7.15□□□□□ -1.26
SCN1A-207ENST00000507401 ZNF610Q8N9Z0 462 aa7.15□□□□□ -1.26
SCN1A-207ENST00000507401 OR6K3Q8NGY3 331 aa7.15□□□□□ -1.26
SCN1A-207ENST00000507401 OR5W2Q8NH69 310 aa7.15□□□□□ -1.26
SCN1A-207ENST00000507401 OR10D3Q8NH80 312 aa7.15□□□□□ -1.26
SCN1A-207ENST00000507401 OR2V1Q8NHB1 315 aa7.15□□□□□ -1.26
SCN1A-207ENST00000507401 POC1BQ8TC44 478 aa7.15□□□□□ -1.26
SCN1A-207ENST00000507401 NRGNQ92686 78 aa7.15□□□□□ -1.26
SCN1A-207ENST00000507401 OSTF1Q92882 214 aa7.15□□□□□ -1.26
SCN1A-207ENST00000507401 FAM162AQ96A26 154 aa7.15□□□□□ -1.26
SCN1A-207ENST00000507401 CREB3L1Q96BA8 519 aa7.15□□□□□ -1.26
SCN1A-207ENST00000507401 PYURFQ96I23 114 aa7.15□□□□□ -1.26
SCN1A-207ENST00000507401 HRASLS5Q96KN8 279 aa7.15□□□□□ -1.26
SCN1A-207ENST00000507401 MRGPRX4Q96LA9 322 aa7.15□□□□□ -1.26
SCN1A-207ENST00000507401 WFIKKN1Q96NZ8 548 aa7.15□□□□□ -1.26
SCN1A-207ENST00000507401 CDCA4Q9BXL8 241 aa7.15□□□□□ -1.26
SCN1A-207ENST00000507401 ADAM19Q9H013 955 aa7.15□□□□□ -1.26
SCN1A-207ENST00000507401 OR10A4Q9H209 315 aa7.15□□□□□ -1.26
SCN1A-207ENST00000507401 LIME1Q9H400 295 aa7.15□□□□□ -1.26
SCN1A-207ENST00000507401 POLE3Q9NRF9 147 aa7.15□□□□□ -1.26
SCN1A-207ENST00000507401 ZNF275Q9NSD4 429 aaPredicted RBP7.15□□□□□ -1.26
SCN1A-207ENST00000507401 EMC3Q9P0I2 261 aa7.15□□□□□ -1.26
SCN1A-207ENST00000507401 DUX4Q9UBX2 424 aa7.15□□□□□ -1.26
SCN1A-207ENST00000507401 PSORS1C1Q9UIG5 152 aa7.15□□□□□ -1.26
SCN1A-207ENST00000507401 BTNL2Q9UIR0 455 aa7.15□□□□□ -1.26
SCN1A-207ENST00000507401 TBC1D24Q9ULP9 559 aa7.15□□□□□ -1.26
SCN1A-207ENST00000507401 PROCRQ9UNN8 238 aa7.15□□□□□ -1.26
SCN1A-207ENST00000507401 EMC9Q9Y3B6 208 aa7.15□□□□□ -1.26
SCN1A-207ENST00000507401 PCDHB14Q9Y5E9 798 aa7.15□□□□□ -1.26
SCN1A-207ENST00000507401 KCNE3Q9Y6H6 103 aa7.15□□□□□ -1.26
SCN1A-207ENST00000507401 ARPC4-TTLL3A0A0A6YYG9 625 aa7.14□□□□□ -1.27
SCN1A-207ENST00000507401 A0A1B0GVI7 797 aa7.14□□□□□ -1.27
SCN1A-207ENST00000507401 SERINC4A6NH21 518 aa7.14□□□□□ -1.27
SCN1A-207ENST00000507401 TRIM77I1YAP6 450 aa7.14□□□□□ -1.27
SCN1A-207ENST00000507401 CXCR6O00574 342 aa7.14□□□□□ -1.27
SCN1A-207ENST00000507401 EFNA2O43921 213 aa7.14□□□□□ -1.27
SCN1A-207ENST00000507401 CXCL13O43927 109 aa7.14□□□□□ -1.27
SCN1A-207ENST00000507401 GMFGO60234 142 aa7.14□□□□□ -1.27
SCN1A-207ENST00000507401 FCMRO60667 390 aa7.14□□□□□ -1.27
SCN1A-207ENST00000507401 SS18L1O75177 396 aaPredicted RBP7.14□□□□□ -1.27
SCN1A-207ENST00000507401 NTN1O95631 604 aa7.14□□□□□ -1.27
SCN1A-207ENST00000507401 FADS2O95864 444 aaKnown RBP7.14□□□□□ -1.27
SCN1A-207ENST00000507401 PLGP00747 810 aaPredicted RBP7.14□□□□□ -1.27
SCN1A-207ENST00000507401 IL1AP01583 271 aa7.14□□□□□ -1.27
SCN1A-207ENST00000507401 RAF1P04049 648 aa7.14□□□□□ -1.27
SCN1A-207ENST00000507401 DBTP11182 482 aaKnown RBP7.14□□□□□ -1.27
SCN1A-207ENST00000507401 POU2F1P14859 743 aa7.14□□□□□ -1.27
SCN1A-207ENST00000507401 SPNP16150 400 aa7.14□□□□□ -1.27
SCN1A-207ENST00000507401 PRKACAP17612 351 aa7.14□□□□□ -1.27
SCN1A-207ENST00000507401 CRYGSP22914 178 aa7.14□□□□□ -1.27
SCN1A-207ENST00000507401 FKBP2P26885 142 aaKnown RBP7.14□□□□□ -1.27
SCN1A-207ENST00000507401 KCNJ5P48544 419 aa7.14□□□□□ -1.27
SCN1A-207ENST00000507401 RGS6P49758 472 aa7.14□□□□□ -1.27
SCN1A-207ENST00000507401 GBX2P52951 348 aaPredicted RBP7.14□□□□□ -1.27
SCN1A-207ENST00000507401 CTBP2P56545 445 aa7.14□□□□□ -1.27
SCN1A-207ENST00000507401 RIPPLY3P57055 190 aa7.14□□□□□ -1.27
SCN1A-207ENST00000507401 AKAP6Q13023 2319 aa7.14□□□□□ -1.27
SCN1A-207ENST00000507401 CBFBQ13951 182 aa7.14□□□□□ -1.27
SCN1A-207ENST00000507401 DGCR6Q14129 220 aa7.14□□□□□ -1.27
SCN1A-207ENST00000507401 GALEQ14376 348 aa7.14□□□□□ -1.27
SCN1A-207ENST00000507401 CAPRIN1Q14444 709 aaKnown RBP7.14□□□□□ -1.27
SCN1A-207ENST00000507401 MFSD13AQ14CX5 517 aa7.14□□□□□ -1.27
SCN1A-207ENST00000507401 RNPS1Q15287 305 aaKnown RBP7.14□□□□□ -1.27
SCN1A-207ENST00000507401 GRK1Q15835 563 aa7.14□□□□□ -1.27
SCN1A-207ENST00000507401 RABL3Q5HYI8 236 aa7.14□□□□□ -1.27
SCN1A-207ENST00000507401 PDZK1Q5T2W1 519 aa7.14□□□□□ -1.27
SCN1A-207ENST00000507401 MEDAGQ5VYS4 303 aa7.14□□□□□ -1.27
SCN1A-207ENST00000507401 HBMQ6B0K9 141 aa7.14□□□□□ -1.27
SCN1A-207ENST00000507401 OR2T5Q6IEZ7 315 aa7.14□□□□□ -1.27
SCN1A-207ENST00000507401 FAHD1Q6P587 224 aa7.14□□□□□ -1.27
SCN1A-207ENST00000507401 PAMR1Q6UXH9 720 aa7.14□□□□□ -1.27
SCN1A-207ENST00000507401 DLEU7Q6UYE1 221 aa7.14□□□□□ -1.27
SCN1A-207ENST00000507401 BEND4Q6ZU67 534 aa7.14□□□□□ -1.27
SCN1A-207ENST00000507401 EIF3MQ7L2H7 374 aaKnown RBP7.14□□□□□ -1.27
SCN1A-207ENST00000507401 ZBTB46Q86UZ6 589 aa7.14□□□□□ -1.27
SCN1A-207ENST00000507401 TGIF2LYQ8IUE0 185 aa7.14□□□□□ -1.27
SCN1A-207ENST00000507401 CLECL1Q8IZS7 167 aa7.14□□□□□ -1.27
SCN1A-207ENST00000507401 GATSQ8NAP1 163 aa7.14□□□□□ -1.27
SCN1A-207ENST00000507401 OR5D16Q8NGK9 328 aa7.14□□□□□ -1.27
SCN1A-207ENST00000507401 OR4A15Q8NGL6 344 aa7.14□□□□□ -1.27
SCN1A-207ENST00000507401 OR2T29Q8NH02 315 aa7.14□□□□□ -1.27
SCN1A-207ENST00000507401 OR5AK3PQ8NH89 298 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms