RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 CH25HO95992 272 aa17.99■□□□□ 0.47
SQSTM1-210ENST00000506042 CD247P20963 164 aa17.99■□□□□ 0.47
SQSTM1-210ENST00000506042 UCP2P55851 309 aa17.99■□□□□ 0.47
SQSTM1-210ENST00000506042 LMO4P61968 165 aa17.99■□□□□ 0.47
SQSTM1-210ENST00000506042 MVKQ03426 396 aa17.99■□□□□ 0.47
SQSTM1-210ENST00000506042 NPTX1Q15818 432 aa17.99■□□□□ 0.47
SQSTM1-210ENST00000506042 ZNF718Q3SXZ3 478 aa17.99■□□□□ 0.47
SQSTM1-210ENST00000506042 C1QL2Q7Z5L3 287 aa17.99■□□□□ 0.47
SQSTM1-210ENST00000506042 OR4K5Q8NGD3 323 aa17.99■□□□□ 0.47
SQSTM1-210ENST00000506042 YIPF5Q969M3 257 aa17.99■□□□□ 0.47
SQSTM1-210ENST00000506042 C7orf26Q96N11 449 aa17.99■□□□□ 0.47
SQSTM1-210ENST00000506042 DDX28Q9NUL7 540 aaKnown RBP17.99■□□□□ 0.47
SQSTM1-210ENST00000506042 SLC25A37Q9NYZ2 338 aa17.99■□□□□ 0.47
SQSTM1-210ENST00000506042 ZNF224Q9NZL3 707 aa17.99■□□□□ 0.47
SQSTM1-210ENST00000506042 VAPAQ9P0L0 249 aa17.99■□□□□ 0.47
SQSTM1-210ENST00000506042 RAB21Q9UL25 225 aa17.99■□□□□ 0.47
SQSTM1-210ENST00000506042 TMEM89A2RUT3 159 aa17.98■□□□□ 0.47
SQSTM1-210ENST00000506042 RP2O75695 350 aa17.98■□□□□ 0.47
SQSTM1-210ENST00000506042 MFN2O95140 757 aa17.98■□□□□ 0.47
SQSTM1-210ENST00000506042 QDPRP09417 244 aa17.98■□□□□ 0.47
SQSTM1-210ENST00000506042 ZNF74Q16587 644 aa17.98■□□□□ 0.47
SQSTM1-210ENST00000506042 ALKBH6Q3KRA9 238 aa17.98■□□□□ 0.47
SQSTM1-210ENST00000506042 ARL9Q6T311 187 aa17.98■□□□□ 0.47
SQSTM1-210ENST00000506042 DIRC2Q96SL1 478 aa17.98■□□□□ 0.47
SQSTM1-210ENST00000506042 SH3GL3Q99963 347 aa17.98■□□□□ 0.47
SQSTM1-210ENST00000506042 GAL3ST1Q99999 423 aa17.98■□□□□ 0.47
SQSTM1-210ENST00000506042 MYEF2Q9P2K5 600 aaKnown RBP17.98■□□□□ 0.47
SQSTM1-210ENST00000506042 LEF1Q9UJU2 399 aaPredicted RBP17.98■□□□□ 0.47
SQSTM1-210ENST00000506042 CPSF4LA6NMK7 179 aaKnown RBP17.97■□□□□ 0.47
SQSTM1-210ENST00000506042 ANGPT2O15123 496 aa17.97■□□□□ 0.47
SQSTM1-210ENST00000506042 NCR1O76036 304 aa17.97■□□□□ 0.47
SQSTM1-210ENST00000506042 HOXB9P17482 250 aaPredicted RBP17.97■□□□□ 0.47
SQSTM1-210ENST00000506042 MAGEB1P43366 347 aa17.97■□□□□ 0.47
SQSTM1-210ENST00000506042 ATP4BP51164 291 aa17.97■□□□□ 0.47
SQSTM1-210ENST00000506042 ZNF81P51508 661 aa17.97■□□□□ 0.47
SQSTM1-210ENST00000506042 AGKQ53H12 422 aa17.97■□□□□ 0.47
SQSTM1-210ENST00000506042 ENTPD8Q5MY95 495 aa17.97■□□□□ 0.47
SQSTM1-210ENST00000506042 USP51Q70EK9 711 aa17.97■□□□□ 0.47
SQSTM1-210ENST00000506042 ZER1Q7Z7L7 766 aa17.97■□□□□ 0.47
SQSTM1-210ENST00000506042 LSRQ86X29 649 aaPredicted RBP17.97■□□□□ 0.47
SQSTM1-210ENST00000506042 ALDH16A1Q8IZ83 802 aa17.97■□□□□ 0.47
SQSTM1-210ENST00000506042 SMYD1Q8NB12 490 aa17.97■□□□□ 0.47
SQSTM1-210ENST00000506042 OR1J1Q8NGS3 322 aa17.97■□□□□ 0.47
SQSTM1-210ENST00000506042 FNDC8Q8TC99 324 aa17.97■□□□□ 0.47
SQSTM1-210ENST00000506042 ADAMTS16Q8TE57 1224 aa17.97■□□□□ 0.47
SQSTM1-210ENST00000506042 OR51B6Q9H340 312 aa17.97■□□□□ 0.47
SQSTM1-210ENST00000506042 BLOC1S5-TXNDC5H3BN57 136 aa17.96■□□□□ 0.47
SQSTM1-210ENST00000506042 PGA4P0DJD7 388 aa17.96■□□□□ 0.47
SQSTM1-210ENST00000506042 PGA3P0DJD8 388 aa17.96■□□□□ 0.47
SQSTM1-210ENST00000506042 CCNOP22674 350 aa17.96■□□□□ 0.47
SQSTM1-210ENST00000506042 IFNA8P32881 189 aa17.96■□□□□ 0.47
SQSTM1-210ENST00000506042 MSMPQ1L6U9 139 aa17.96■□□□□ 0.47
SQSTM1-210ENST00000506042 LINC00114Q6XXX2 140 aa17.96■□□□□ 0.47
SQSTM1-210ENST00000506042 MAVSQ7Z434 540 aa17.96■□□□□ 0.47
SQSTM1-210ENST00000506042 CARM1Q86X55 608 aa17.96■□□□□ 0.47
SQSTM1-210ENST00000506042 ZNF584Q8IVC4 421 aa17.96■□□□□ 0.47
SQSTM1-210ENST00000506042 DYDC1Q8WWB3 177 aa17.96■□□□□ 0.47
SQSTM1-210ENST00000506042 ARHGDIGQ99819 225 aa17.96■□□□□ 0.47
SQSTM1-210ENST00000506042 ZMAT3Q9HA38 289 aaKnown RBP17.96■□□□□ 0.47
SQSTM1-210ENST00000506042 SLC7A7Q9UM01 511 aa17.96■□□□□ 0.47
SQSTM1-210ENST00000506042 TRIM33Q9UPN9 1127 aa17.96■□□□□ 0.47
SQSTM1-210ENST00000506042 ISPDA4D126 451 aa17.95■□□□□ 0.46
SQSTM1-210ENST00000506042 LRRN3E7EW58 273 aa17.95■□□□□ 0.46
SQSTM1-210ENST00000506042 H3BSA7 217 aa17.95■□□□□ 0.46
SQSTM1-210ENST00000506042 M0R3H8 397 aa17.95■□□□□ 0.46
SQSTM1-210ENST00000506042 PLPP2O43688 288 aa17.95■□□□□ 0.46
SQSTM1-210ENST00000506042 IGHV3-13P01766 116 aa17.95■□□□□ 0.46
SQSTM1-210ENST00000506042 PATE4P0C8F1 98 aa17.95■□□□□ 0.46
SQSTM1-210ENST00000506042 ARHGDIAP52565 204 aa17.95■□□□□ 0.46
SQSTM1-210ENST00000506042 FOXL1Q12952 345 aa17.95■□□□□ 0.46
SQSTM1-210ENST00000506042 MELKQ14680 651 aa17.95■□□□□ 0.46
SQSTM1-210ENST00000506042 AVPI1Q5T686 147 aa17.95■□□□□ 0.46
SQSTM1-210ENST00000506042 NHLRC1Q6VVB1 395 aa17.95■□□□□ 0.46
SQSTM1-210ENST00000506042 NOXO1Q8NFA2 376 aa17.95■□□□□ 0.46
SQSTM1-210ENST00000506042 SMURF2Q9HAU4 748 aa17.95■□□□□ 0.46
SQSTM1-210ENST00000506042 G6PC2Q9NQR9 355 aa17.95■□□□□ 0.46
SQSTM1-210ENST00000506042 TAS2R5Q9NYW4 299 aa17.95■□□□□ 0.46
SQSTM1-210ENST00000506042 ZDHHC8Q9ULC8 765 aa17.95■□□□□ 0.46
SQSTM1-210ENST00000506042 NDUFAF1Q9Y375 327 aa17.95■□□□□ 0.46
SQSTM1-210ENST00000506042 WIPI2Q9Y4P8 454 aa17.95■□□□□ 0.46
SQSTM1-210ENST00000506042 LOC105371242A0A075B767 164 aa17.94■□□□□ 0.46
SQSTM1-210ENST00000506042 M0QX08 132 aa17.94■□□□□ 0.46
SQSTM1-210ENST00000506042 KPNA4O00629 521 aaPredicted RBP17.94■□□□□ 0.46
SQSTM1-210ENST00000506042 FOXH1O75593 365 aa17.94■□□□□ 0.46
SQSTM1-210ENST00000506042 RGS9O75916 674 aaPredicted RBP17.94■□□□□ 0.46
SQSTM1-210ENST00000506042 CLPTM1O96005 669 aa17.94■□□□□ 0.46
SQSTM1-210ENST00000506042 IGHV2-5P01817 119 aa17.94■□□□□ 0.46
SQSTM1-210ENST00000506042 TNFSF4P23510 183 aa17.94■□□□□ 0.46
SQSTM1-210ENST00000506042 GDI2P50395 445 aaKnown RBP17.94■□□□□ 0.46
SQSTM1-210ENST00000506042 ARFIP2P53365 341 aa17.94■□□□□ 0.46
SQSTM1-210ENST00000506042 PCBD1P61457 104 aa17.94■□□□□ 0.46
SQSTM1-210ENST00000506042 PAGE3Q5JUK9 113 aa17.94■□□□□ 0.46
SQSTM1-210ENST00000506042 DHDDSQ86SQ9 333 aa17.94■□□□□ 0.46
SQSTM1-210ENST00000506042 MSRB3Q8IXL7 192 aa17.94■□□□□ 0.46
SQSTM1-210ENST00000506042 VANGL1Q8TAA9 524 aaPredicted RBP17.94■□□□□ 0.46
SQSTM1-210ENST00000506042 MCHR2Q969V1 340 aa17.94■□□□□ 0.46
SQSTM1-210ENST00000506042 GPA33Q99795 319 aa17.94■□□□□ 0.46
SQSTM1-210ENST00000506042 POLR2J2Q9GZM3 115 aaKnown RBP17.94■□□□□ 0.46
SQSTM1-210ENST00000506042 POLR2J3Q9H1A7 115 aaKnown RBP17.94■□□□□ 0.46
SQSTM1-210ENST00000506042 C7orf69Q9H7B7 122 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms