RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 IGHV3-66A0A0C4DH42 116 aa2.34□□□□□ -2.03
TOPBP1-204ENST00000505804 DYNC1I1O14576 645 aa2.34□□□□□ -2.03
TOPBP1-204ENST00000505804 SERPIND1P05546 499 aa2.34□□□□□ -2.03
TOPBP1-204ENST00000505804 MRPL3P09001 348 aaKnown RBP2.34□□□□□ -2.03
TOPBP1-204ENST00000505804 FOLR1P15328 257 aa2.34□□□□□ -2.03
TOPBP1-204ENST00000505804 HRH1P35367 487 aa2.34□□□□□ -2.03
TOPBP1-204ENST00000505804 PMELP40967 661 aa2.34□□□□□ -2.03
TOPBP1-204ENST00000505804 CDKN2BP42772 138 aa2.34□□□□□ -2.03
TOPBP1-204ENST00000505804 CRYBB2P43320 205 aa2.34□□□□□ -2.03
TOPBP1-204ENST00000505804 ECH1Q13011 328 aa2.34□□□□□ -2.03
TOPBP1-204ENST00000505804 TGFBIQ15582 683 aa2.34□□□□□ -2.03
TOPBP1-204ENST00000505804 ZSCAN26Q16670 478 aa2.34□□□□□ -2.03
TOPBP1-204ENST00000505804 UBE2SQ16763 222 aa2.34□□□□□ -2.03
TOPBP1-204ENST00000505804 CEP55Q53EZ4 464 aa2.34□□□□□ -2.03
TOPBP1-204ENST00000505804 PRAMEF5Q5TYX0 476 aa2.34□□□□□ -2.03
TOPBP1-204ENST00000505804 PRAMEF6Q5VXH4 476 aa2.34□□□□□ -2.03
TOPBP1-204ENST00000505804 ZNF836Q6ZNA1 936 aa2.34□□□□□ -2.03
TOPBP1-204ENST00000505804 ABHD13Q7L211 337 aa2.34□□□□□ -2.03
TOPBP1-204ENST00000505804 PEX26Q7Z412 305 aa2.34□□□□□ -2.03
TOPBP1-204ENST00000505804 TTC5Q8N0Z6 440 aa2.34□□□□□ -2.03
TOPBP1-204ENST00000505804 UBE2J2Q8N2K1 259 aa2.34□□□□□ -2.03
TOPBP1-204ENST00000505804 C15orf56Q8N910 161 aa2.34□□□□□ -2.03
TOPBP1-204ENST00000505804 PLPPR1Q8TBJ4 325 aa2.34□□□□□ -2.03
TOPBP1-204ENST00000505804 FBXO32Q969P5 355 aa2.34□□□□□ -2.03
TOPBP1-204ENST00000505804 OR2A5Q96R48 311 aa2.34□□□□□ -2.03
TOPBP1-204ENST00000505804 P2RX4Q99571 388 aa2.34□□□□□ -2.03
TOPBP1-204ENST00000505804 NDFIP1Q9BT67 221 aa2.34□□□□□ -2.03
TOPBP1-204ENST00000505804 MRPL37Q9BZE1 423 aaKnown RBP2.34□□□□□ -2.03
TOPBP1-204ENST00000505804 CWH43Q9H720 699 aa2.34□□□□□ -2.03
TOPBP1-204ENST00000505804 NTN4Q9HB63 628 aa2.34□□□□□ -2.03
TOPBP1-204ENST00000505804 COX16Q9P0S2 106 aa2.34□□□□□ -2.03
TOPBP1-204ENST00000505804 ZNF629Q9UEG4 869 aaPredicted RBP2.34□□□□□ -2.03
TOPBP1-204ENST00000505804 SHPKQ9UHJ6 478 aa2.34□□□□□ -2.03
TOPBP1-204ENST00000505804 ZNF222Q9UK12 451 aa2.34□□□□□ -2.03
TOPBP1-204ENST00000505804 PSG8Q9UQ74 426 aa2.34□□□□□ -2.03
TOPBP1-204ENST00000505804 GPATCH8Q9UKJ3 1502 aaKnown RBP2.33□□□□□ -2.04
TOPBP1-204ENST00000505804 A0A1B0GVX0 72 aa2.33□□□□□ -2.04
TOPBP1-204ENST00000505804 A0A1W2PP18 115 aa2.33□□□□□ -2.04
TOPBP1-204ENST00000505804 F6UB75 175 aa2.33□□□□□ -2.04
TOPBP1-204ENST00000505804 FABP3P05413 133 aa2.33□□□□□ -2.04
TOPBP1-204ENST00000505804 RHOXF2BP0C7M4 288 aa2.33□□□□□ -2.04
TOPBP1-204ENST00000505804 CALM1P0DP23 149 aa2.33□□□□□ -2.04
TOPBP1-204ENST00000505804 CALM2P0DP24 149 aa2.33□□□□□ -2.04
TOPBP1-204ENST00000505804 CALM3P0DP25 149 aa2.33□□□□□ -2.04
TOPBP1-204ENST00000505804 MCF2P10911 925 aa2.33□□□□□ -2.04
TOPBP1-204ENST00000505804 NCF2P19878 526 aaPredicted RBP2.33□□□□□ -2.04
TOPBP1-204ENST00000505804 HNRNPH3P31942 346 aaKnown RBP2.33□□□□□ -2.04
TOPBP1-204ENST00000505804 PLP1P60201 277 aa2.33□□□□□ -2.04
TOPBP1-204ENST00000505804 NUTF2P61970 127 aaKnown RBP2.33□□□□□ -2.04
TOPBP1-204ENST00000505804 MRPS22P82650 360 aaKnown RBP2.33□□□□□ -2.04
TOPBP1-204ENST00000505804 BST2Q10589 180 aaKnown RBP2.33□□□□□ -2.04
TOPBP1-204ENST00000505804 STK11Q15831 433 aa2.33□□□□□ -2.04
TOPBP1-204ENST00000505804 LY6G6FQ5SQ64 297 aa2.33□□□□□ -2.04
TOPBP1-204ENST00000505804 DNAJC24Q6P3W2 148 aa2.33□□□□□ -2.04
TOPBP1-204ENST00000505804 ZNF561Q8N587 486 aa2.33□□□□□ -2.04
TOPBP1-204ENST00000505804 OR10G4Q8NGN3 311 aa2.33□□□□□ -2.04
TOPBP1-204ENST00000505804 OR1S2Q8NGQ3 325 aa2.33□□□□□ -2.04
TOPBP1-204ENST00000505804 OR13C2Q8NGS9 318 aa2.33□□□□□ -2.04
TOPBP1-204ENST00000505804 CHAC1Q9BUX1 264 aa2.33□□□□□ -2.04
TOPBP1-204ENST00000505804 ZNF430Q9H8G1 570 aaPredicted RBP2.33□□□□□ -2.04
TOPBP1-204ENST00000505804 YTHDF2Q9Y5A9 579 aaKnown RBP2.33□□□□□ -2.04
TOPBP1-204ENST00000505804 A0A0U1RQS6 177 aa2.32□□□□□ -2.04
TOPBP1-204ENST00000505804 TMEM150BA6NC51 233 aa2.32□□□□□ -2.04
TOPBP1-204ENST00000505804 TCP11X1B4DZS4 312 aa2.32□□□□□ -2.04
TOPBP1-204ENST00000505804 SPECC1L-ADORA2AF8WAN1 911 aa2.32□□□□□ -2.04
TOPBP1-204ENST00000505804 GABARAPO95166 117 aa2.32□□□□□ -2.04
TOPBP1-204ENST00000505804 CLIC3O95833 236 aa2.32□□□□□ -2.04
TOPBP1-204ENST00000505804 CST1P01037 141 aa2.32□□□□□ -2.04
TOPBP1-204ENST00000505804 SLC2A3P11169 496 aa2.32□□□□□ -2.04
TOPBP1-204ENST00000505804 YWHAGP61981 247 aaKnown RBP eCLIP2.32□□□□□ -2.04
TOPBP1-204ENST00000505804 RAP1AP62834 184 aa2.32□□□□□ -2.04
TOPBP1-204ENST00000505804 ACTG2P63267 376 aa2.32□□□□□ -2.04
TOPBP1-204ENST00000505804 DDX39BQ13838 428 aaKnown RBP2.32□□□□□ -2.04
TOPBP1-204ENST00000505804 MOBPQ13875 183 aa2.32□□□□□ -2.04
TOPBP1-204ENST00000505804 CLINT1Q14677 625 aa2.32□□□□□ -2.04
TOPBP1-204ENST00000505804 GINS1Q14691 196 aa2.32□□□□□ -2.04
TOPBP1-204ENST00000505804 SPECC1LQ69YQ0 1117 aa2.32□□□□□ -2.04
TOPBP1-204ENST00000505804 NANOGP8Q6NSW7 305 aa2.32□□□□□ -2.04
TOPBP1-204ENST00000505804 TEX43Q6ZNM6 134 aa2.32□□□□□ -2.04
TOPBP1-204ENST00000505804 NIPA1Q7RTP0 329 aa2.32□□□□□ -2.04
TOPBP1-204ENST00000505804 HDDC2Q7Z4H3 204 aa2.32□□□□□ -2.04
TOPBP1-204ENST00000505804 MS4A15Q8N5U1 240 aa2.32□□□□□ -2.04
TOPBP1-204ENST00000505804 EID2Q8N6I1 236 aa2.32□□□□□ -2.04
TOPBP1-204ENST00000505804 OR9K2Q8NGE7 335 aa2.32□□□□□ -2.04
TOPBP1-204ENST00000505804 OR4S2Q8NH73 311 aa2.32□□□□□ -2.04
TOPBP1-204ENST00000505804 RHEBL1Q8TAI7 183 aa2.32□□□□□ -2.04
TOPBP1-204ENST00000505804 LKAAEAR1Q8TD35 194 aa2.32□□□□□ -2.04
TOPBP1-204ENST00000505804 CXorf40AQ8TE69 158 aa2.32□□□□□ -2.04
TOPBP1-204ENST00000505804 ZNF606Q8WXB4 792 aa2.32□□□□□ -2.04
TOPBP1-204ENST00000505804 FAM3DQ96BQ1 224 aa2.32□□□□□ -2.04
TOPBP1-204ENST00000505804 PIK3IP1Q96FE7 263 aa2.32□□□□□ -2.04
TOPBP1-204ENST00000505804 METTL7AQ9H8H3 244 aa2.32□□□□□ -2.04
TOPBP1-204ENST00000505804 IGSF9BQ9UPX0 1349 aa2.32□□□□□ -2.04
TOPBP1-204ENST00000505804 CNTNAP1P78357 1384 aa2.32□□□□□ -2.04
TOPBP1-204ENST00000505804 IGKV6-21A0A0C4DH24 114 aa2.31□□□□□ -2.04
TOPBP1-204ENST00000505804 B4GALT5O43286 388 aa2.31□□□□□ -2.04
TOPBP1-204ENST00000505804 AIFM1O95831 613 aa2.31□□□□□ -2.04
TOPBP1-204ENST00000505804 CHMLP26374 656 aa2.31□□□□□ -2.04
TOPBP1-204ENST00000505804 CEACAM6P40199 344 aa2.31□□□□□ -2.04
TOPBP1-204ENST00000505804 CSNK1A1P48729 337 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms