RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 HLA-DPB1P04440 258 aa1.42□□□□□ -2.18
HMGB1P29-201ENST00000505659 MAS1LP35410 378 aa1.42□□□□□ -2.18
HMGB1P29-201ENST00000505659 ATP5C1P36542 298 aaKnown RBP1.42□□□□□ -2.18
HMGB1P29-201ENST00000505659 FDFT1P37268 417 aa1.42□□□□□ -2.18
HMGB1P29-201ENST00000505659 CD86P42081 329 aa1.42□□□□□ -2.18
HMGB1P29-201ENST00000505659 ZNF92Q03936 586 aa1.42□□□□□ -2.18
HMGB1P29-201ENST00000505659 SRSF5Q13243 272 aaKnown RBP1.42□□□□□ -2.18
HMGB1P29-201ENST00000505659 PRPSAP1Q14558 356 aa1.42□□□□□ -2.18
HMGB1P29-201ENST00000505659 RGNQ15493 299 aa1.42□□□□□ -2.18
HMGB1P29-201ENST00000505659 ZSCAN26Q16670 478 aa1.42□□□□□ -2.18
HMGB1P29-201ENST00000505659 RABL6Q3YEC7 729 aaPredicted RBP1.42□□□□□ -2.18
HMGB1P29-201ENST00000505659 GALNT17Q6IS24 598 aa1.42□□□□□ -2.18
HMGB1P29-201ENST00000505659 TMEM179Q6ZVK1 233 aa1.42□□□□□ -2.18
HMGB1P29-201ENST00000505659 ABHD13Q7L211 337 aa1.42□□□□□ -2.18
HMGB1P29-201ENST00000505659 BHLHA15Q7RTS1 189 aaPredicted RBP1.42□□□□□ -2.18
HMGB1P29-201ENST00000505659 CEP112Q8N8E3 955 aa1.42□□□□□ -2.18
HMGB1P29-201ENST00000505659 OR8U1Q8NH10 309 aa1.42□□□□□ -2.18
HMGB1P29-201ENST00000505659 CIRBP-AS1Q8TBR5 109 aa1.42□□□□□ -2.18
HMGB1P29-201ENST00000505659 C15orf40Q8WUR7 153 aa1.42□□□□□ -2.18
HMGB1P29-201ENST00000505659 ZNF681Q96N22 645 aa1.42□□□□□ -2.18
HMGB1P29-201ENST00000505659 RNF157Q96PX1 679 aa1.42□□□□□ -2.18
HMGB1P29-201ENST00000505659 SULT4A1Q9BR01 284 aa1.42□□□□□ -2.18
HMGB1P29-201ENST00000505659 ZSCAN5AQ9BUG6 496 aa1.42□□□□□ -2.18
HMGB1P29-201ENST00000505659 TEKT3Q9BXF9 490 aa1.42□□□□□ -2.18
HMGB1P29-201ENST00000505659 SLC25A2Q9BXI2 301 aa1.42□□□□□ -2.18
HMGB1P29-201ENST00000505659 ZNF717Q9BY31 904 aaPredicted RBP1.42□□□□□ -2.18
HMGB1P29-201ENST00000505659 PPA2Q9H2U2 334 aa1.42□□□□□ -2.18
HMGB1P29-201ENST00000505659 SDAD1Q9NVU7 687 aaKnown RBP eCLIP1.42□□□□□ -2.18
HMGB1P29-201ENST00000505659 UBIAD1Q9Y5Z9 338 aa1.42□□□□□ -2.18
HMGB1P29-201ENST00000505659 ADAMTS13Q76LX8 1427 aa1.41□□□□□ -2.18
HMGB1P29-201ENST00000505659 SPECC1L-ADORA2AF8WAN1 911 aa1.41□□□□□ -2.18
HMGB1P29-201ENST00000505659 K7EPI3 171 aa1.41□□□□□ -2.18
HMGB1P29-201ENST00000505659 SMPD2O60906 423 aa1.41□□□□□ -2.18
HMGB1P29-201ENST00000505659 RHOBTB1O94844 696 aa1.41□□□□□ -2.18
HMGB1P29-201ENST00000505659 FGF1P05230 155 aa1.41□□□□□ -2.18
HMGB1P29-201ENST00000505659 P0C880 135 aa1.41□□□□□ -2.18
HMGB1P29-201ENST00000505659 C1GALT1C1LP0DN25 315 aa1.41□□□□□ -2.18
HMGB1P29-201ENST00000505659 SERPINB5P36952 375 aa1.41□□□□□ -2.18
HMGB1P29-201ENST00000505659 ZNF138P52744 262 aa1.41□□□□□ -2.18
HMGB1P29-201ENST00000505659 ARG2P78540 354 aa1.41□□□□□ -2.18
HMGB1P29-201ENST00000505659 OGDHQ02218 1023 aa1.41□□□□□ -2.18
HMGB1P29-201ENST00000505659 PON2Q15165 354 aa1.41□□□□□ -2.18
HMGB1P29-201ENST00000505659 IRF4Q15306 451 aa1.41□□□□□ -2.18
HMGB1P29-201ENST00000505659 SPECC1LQ69YQ0 1117 aa1.41□□□□□ -2.18
HMGB1P29-201ENST00000505659 LHFPL3Q86UP9 236 aa1.41□□□□□ -2.18
HMGB1P29-201ENST00000505659 LRRC52Q8N7C0 313 aa1.41□□□□□ -2.18
HMGB1P29-201ENST00000505659 NOXO1Q8NFA2 376 aa1.41□□□□□ -2.18
HMGB1P29-201ENST00000505659 OR2G2Q8NGZ5 317 aa1.41□□□□□ -2.18
HMGB1P29-201ENST00000505659 ZCCHC13Q8WW36 166 aaKnown RBP1.41□□□□□ -2.18
HMGB1P29-201ENST00000505659 EMG1Q92979 244 aaKnown RBP1.41□□□□□ -2.18
HMGB1P29-201ENST00000505659 CREB3L1Q96BA8 519 aa1.41□□□□□ -2.18
HMGB1P29-201ENST00000505659 FAM3DQ96BQ1 224 aa1.41□□□□□ -2.18
HMGB1P29-201ENST00000505659 DTNBP1Q96EV8 351 aa1.41□□□□□ -2.18
HMGB1P29-201ENST00000505659 HSFY1Q96LI6 401 aa1.41□□□□□ -2.18
HMGB1P29-201ENST00000505659 RBM14Q96PK6 669 aaKnown RBP1.41□□□□□ -2.18
HMGB1P29-201ENST00000505659 PANX2Q96RD6 677 aa1.41□□□□□ -2.18
HMGB1P29-201ENST00000505659 CDX2Q99626 313 aaPredicted RBP1.41□□□□□ -2.18
HMGB1P29-201ENST00000505659 SAV1Q9H4B6 383 aaPredicted RBP1.41□□□□□ -2.18
HMGB1P29-201ENST00000505659 FN3KRPQ9HA64 309 aa1.41□□□□□ -2.18
HMGB1P29-201ENST00000505659 FBXO6Q9NRD1 293 aaPredicted RBP1.41□□□□□ -2.18
HMGB1P29-201ENST00000505659 TMOD2Q9NZR1 351 aa1.41□□□□□ -2.18
HMGB1P29-201ENST00000505659 CGNQ9P2M7 1197 aaKnown RBP1.41□□□□□ -2.18
HMGB1P29-201ENST00000505659 CRCT1Q9UGL9 99 aa1.41□□□□□ -2.18
HMGB1P29-201ENST00000505659 PNPLA6Q8IY17 1366 aa1.41□□□□□ -2.18
HMGB1P29-201ENST00000505659 CDHR2Q9BYE9 1310 aa1.4□□□□□ -2.18
HMGB1P29-201ENST00000505659 K7EQM0 130 aa1.4□□□□□ -2.19
HMGB1P29-201ENST00000505659 IDH1O75874 414 aaKnown RBP1.4□□□□□ -2.19
HMGB1P29-201ENST00000505659 C1orf105O95561 183 aa1.4□□□□□ -2.19
HMGB1P29-201ENST00000505659 APCSP02743 223 aa1.4□□□□□ -2.19
HMGB1P29-201ENST00000505659 KRT8P05787 483 aa1.4□□□□□ -2.19
HMGB1P29-201ENST00000505659 CT62P0C5K7 136 aa1.4□□□□□ -2.19
HMGB1P29-201ENST00000505659 UBTFL6P0CB48 400 aaPredicted RBP1.4□□□□□ -2.19
HMGB1P29-201ENST00000505659 CEACAM6P40199 344 aa1.4□□□□□ -2.19
HMGB1P29-201ENST00000505659 NUTF2P61970 127 aaKnown RBP1.4□□□□□ -2.19
HMGB1P29-201ENST00000505659 ELP6Q0PNE2 266 aa1.4□□□□□ -2.19
HMGB1P29-201ENST00000505659 PIGHQ14442 188 aaPredicted RBP1.4□□□□□ -2.19
HMGB1P29-201ENST00000505659 TAF9Q16594 264 aa1.4□□□□□ -2.19
HMGB1P29-201ENST00000505659 ZFP1Q6P2D0 407 aa1.4□□□□□ -2.19
HMGB1P29-201ENST00000505659 PLET1Q6UQ28 207 aa1.4□□□□□ -2.19
HMGB1P29-201ENST00000505659 HSD17B11Q8NBQ5 300 aa1.4□□□□□ -2.19
HMGB1P29-201ENST00000505659 OR4K5Q8NGD3 323 aa1.4□□□□□ -2.19
HMGB1P29-201ENST00000505659 COQ8AQ8NI60 647 aa1.4□□□□□ -2.19
HMGB1P29-201ENST00000505659 LINC01560Q8TB33 94 aa1.4□□□□□ -2.19
HMGB1P29-201ENST00000505659 RTN4IP1Q8WWV3 396 aaPredicted RBP1.4□□□□□ -2.19
HMGB1P29-201ENST00000505659 ZNF607Q96SK3 696 aa1.4□□□□□ -2.19
HMGB1P29-201ENST00000505659 TCHPQ9BT92 498 aa1.4□□□□□ -2.19
HMGB1P29-201ENST00000505659 TMEM59Q9BXS4 323 aa1.4□□□□□ -2.19
HMGB1P29-201ENST00000505659 PARD6BQ9BYG5 372 aa1.4□□□□□ -2.19
HMGB1P29-201ENST00000505659 LIN28AQ9H9Z2 209 aaKnown RBP1.4□□□□□ -2.19
HMGB1P29-201ENST00000505659 SLC35D1Q9NTN3 355 aa1.4□□□□□ -2.19
HMGB1P29-201ENST00000505659 ZNF391Q9UJN7 358 aa1.4□□□□□ -2.19
HMGB1P29-201ENST00000505659 PTBP2Q9UKA9 531 aaKnown RBP1.4□□□□□ -2.19
HMGB1P29-201ENST00000505659 SCN1AP35498 2009 aa1.4□□□□□ -2.19
HMGB1P29-201ENST00000505659 TRAV39A0A0B4J263 110 aa1.39□□□□□ -2.19
HMGB1P29-201ENST00000505659 A0A0B4J2A0 478 aa1.39□□□□□ -2.19
HMGB1P29-201ENST00000505659 A0A0U1RQV1 116 aa1.39□□□□□ -2.19
HMGB1P29-201ENST00000505659 C16orf90A8MZG2 172 aa1.39□□□□□ -2.19
HMGB1P29-201ENST00000505659 CCL21O00585 134 aa1.39□□□□□ -2.19
HMGB1P29-201ENST00000505659 CXCL12P48061 93 aa1.39□□□□□ -2.19
HMGB1P29-201ENST00000505659 IL15RAQ13261 267 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms