RNA–Protein interactions for RNA: ENST00000504948.5

ATP2C1-208, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 4,714 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-208ENST00000504948 TMEM182Q6ZP80 229 aaPredicted RBP7.16□□□□□ -1.26
ATP2C1-208ENST00000504948 SHISA6Q6ZSJ9 500 aa7.16□□□□□ -1.26
ATP2C1-208ENST00000504948 SYT13Q7L8C5 426 aa7.16□□□□□ -1.26
ATP2C1-208ENST00000504948 PPP1R3BQ86XI6 285 aa7.16□□□□□ -1.26
ATP2C1-208ENST00000504948 GVQW1Q8N7I0 195 aa7.16□□□□□ -1.26
ATP2C1-208ENST00000504948 SLC30A7Q8NEW0 376 aa7.16□□□□□ -1.26
ATP2C1-208ENST00000504948 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.16□□□□□ -1.26
ATP2C1-208ENST00000504948 MEX3AA1L020 520 aaKnown RBP7.16□□□□□ -1.26
ATP2C1-208ENST00000504948 CDC42EP2O14613 210 aa7.16□□□□□ -1.26
ATP2C1-208ENST00000504948 BRINP1O60477 761 aa7.16□□□□□ -1.26
ATP2C1-208ENST00000504948 RENP00797 406 aa7.16□□□□□ -1.26
ATP2C1-208ENST00000504948 S1PR1P21453 382 aa7.16□□□□□ -1.26
ATP2C1-208ENST00000504948 ITGB7P26010 798 aa7.16□□□□□ -1.26
ATP2C1-208ENST00000504948 GLP1RP43220 463 aa7.16□□□□□ -1.26
ATP2C1-208ENST00000504948 P2RX1P51575 399 aa7.16□□□□□ -1.26
ATP2C1-208ENST00000504948 RAB11AP62491 216 aa7.16□□□□□ -1.26
ATP2C1-208ENST00000504948 RPS4XP62701 263 aaKnown RBP7.16□□□□□ -1.26
ATP2C1-208ENST00000504948 MN1Q10571 1320 aaPredicted RBP7.16□□□□□ -1.26
ATP2C1-208ENST00000504948 ACKR1Q16570 336 aa7.16□□□□□ -1.26
ATP2C1-208ENST00000504948 C2orf68Q2NKX9 166 aa7.16□□□□□ -1.26
ATP2C1-208ENST00000504948 IAH1Q2TAA2 248 aaPredicted RBP7.16□□□□□ -1.26
ATP2C1-208ENST00000504948 SP6Q3SY56 376 aa7.16□□□□□ -1.26
ATP2C1-208ENST00000504948 C17orf99Q6UX52 265 aa7.16□□□□□ -1.26
ATP2C1-208ENST00000504948 GDF7Q7Z4P5 450 aa7.16□□□□□ -1.26
ATP2C1-208ENST00000504948 YAF2Q8IY57 180 aa7.16□□□□□ -1.26
ATP2C1-208ENST00000504948 DUSP18Q8NEJ0 188 aa7.16□□□□□ -1.26
ATP2C1-208ENST00000504948 TMEM37Q8WXS4 190 aa7.16□□□□□ -1.26
ATP2C1-208ENST00000504948 SNX22Q96L94 193 aa7.16□□□□□ -1.26
ATP2C1-208ENST00000504948 C1QTNF3Q9BXJ4 246 aa7.16□□□□□ -1.26
ATP2C1-208ENST00000504948 OR11A1Q9GZK7 315 aa7.16□□□□□ -1.26
ATP2C1-208ENST00000504948 SLC52A3Q9NQ40 469 aa7.16□□□□□ -1.26
ATP2C1-208ENST00000504948 MOKQ9UQ07 419 aa7.16□□□□□ -1.26
ATP2C1-208ENST00000504948 C14orf166Q9Y224 244 aaKnown RBP7.16□□□□□ -1.26
ATP2C1-208ENST00000504948 YIPF1Q9Y548 306 aa7.16□□□□□ -1.26
ATP2C1-208ENST00000504948 DENND4AQ7Z401 1863 aa7.15□□□□□ -1.26
ATP2C1-208ENST00000504948 TMEM218A2RU14 115 aa7.15□□□□□ -1.26
ATP2C1-208ENST00000504948 ZNF840PA6NDX5 716 aa7.15□□□□□ -1.26
ATP2C1-208ENST00000504948 PRAMEF25A6NGN4 478 aa7.15□□□□□ -1.26
ATP2C1-208ENST00000504948 ZNF726A6NNF4 738 aa7.15□□□□□ -1.26
ATP2C1-208ENST00000504948 PLPP1O14494 284 aa7.15□□□□□ -1.26
ATP2C1-208ENST00000504948 CXCL11O14625 94 aa7.15□□□□□ -1.26
ATP2C1-208ENST00000504948 GABRR1P24046 479 aa7.15□□□□□ -1.26
ATP2C1-208ENST00000504948 SRSF5Q13243 272 aaKnown RBP7.15□□□□□ -1.26
ATP2C1-208ENST00000504948 Q3ZCU0 254 aa7.15□□□□□ -1.26
ATP2C1-208ENST00000504948 ERASQ7Z444 233 aa7.15□□□□□ -1.26
ATP2C1-208ENST00000504948 GLYATL2Q8WU03 294 aa7.15□□□□□ -1.26
ATP2C1-208ENST00000504948 ASB13Q8WXK3 278 aa7.15□□□□□ -1.26
ATP2C1-208ENST00000504948 PGAP3Q96FM1 320 aaPredicted RBP7.15□□□□□ -1.26
ATP2C1-208ENST00000504948 SLC6A18Q96N87 628 aa7.15□□□□□ -1.26
ATP2C1-208ENST00000504948 CDC6Q99741 560 aa7.15□□□□□ -1.26
ATP2C1-208ENST00000504948 ELOVL3Q9HB03 270 aa7.15□□□□□ -1.26
ATP2C1-208ENST00000504948 MED9Q9NWA0 146 aa7.15□□□□□ -1.26
ATP2C1-208ENST00000504948 MEMO1Q9Y316 297 aa7.15□□□□□ -1.26
ATP2C1-208ENST00000504948 SCN10AQ9Y5Y9 1956 aa7.15□□□□□ -1.26
ATP2C1-208ENST00000504948 IGHV3-64DA0A0J9YX35 117 aa7.15□□□□□ -1.26
ATP2C1-208ENST00000504948 A0A0U1RQF3 1178 aa7.15□□□□□ -1.26
ATP2C1-208ENST00000504948 C2orf72A6NCS6 295 aa7.15□□□□□ -1.26
ATP2C1-208ENST00000504948 GEMIN2O14893 280 aaKnown RBP7.15□□□□□ -1.26
ATP2C1-208ENST00000504948 GPR37O15354 613 aa7.15□□□□□ -1.26
ATP2C1-208ENST00000504948 GNRH1P01148 92 aa7.15□□□□□ -1.26
ATP2C1-208ENST00000504948 TYRP14679 529 aa7.15□□□□□ -1.26
ATP2C1-208ENST00000504948 ABCD3P28288 659 aa7.15□□□□□ -1.26
ATP2C1-208ENST00000504948 EIF5AP63241 154 aaKnown RBP7.15□□□□□ -1.26
ATP2C1-208ENST00000504948 NTHL1P78549 312 aa7.15□□□□□ -1.26
ATP2C1-208ENST00000504948 BDH1Q02338 343 aa7.15□□□□□ -1.26
ATP2C1-208ENST00000504948 DHCR24Q15392 516 aa7.15□□□□□ -1.26
ATP2C1-208ENST00000504948 OR1Q1Q15612 314 aa7.15□□□□□ -1.26
ATP2C1-208ENST00000504948 GPR137Q96N19 417 aa7.15□□□□□ -1.26
ATP2C1-208ENST00000504948 ZNF251Q9BRH9 671 aa7.15□□□□□ -1.26
ATP2C1-208ENST00000504948 MAGT1Q9H0U3 335 aa7.15□□□□□ -1.26
ATP2C1-208ENST00000504948 C6orf106Q9H6K1 298 aaPredicted RBP7.15□□□□□ -1.26
ATP2C1-208ENST00000504948 TAF9BQ9HBM6 251 aa7.15□□□□□ -1.26
ATP2C1-208ENST00000504948 NRIP3Q9NQ35 241 aa7.15□□□□□ -1.26
ATP2C1-208ENST00000504948 ZNF275Q9NSD4 429 aaPredicted RBP7.15□□□□□ -1.26
ATP2C1-208ENST00000504948 KCNMB2Q9Y691 235 aa7.15□□□□□ -1.26
ATP2C1-208ENST00000504948 PDCD11Q14690 1871 aaKnown RBP7.15□□□□□ -1.27
ATP2C1-208ENST00000504948 TMEM129A0AVI4 362 aa7.15□□□□□ -1.27
ATP2C1-208ENST00000504948 TRAPPC13A5PLN9 417 aa7.15□□□□□ -1.27
ATP2C1-208ENST00000504948 WASH4PA8MWX3 477 aa7.15□□□□□ -1.27
ATP2C1-208ENST00000504948 H3BML4 177 aa7.15□□□□□ -1.27
ATP2C1-208ENST00000504948 CLDN4O14493 209 aa7.15□□□□□ -1.27
ATP2C1-208ENST00000504948 YKT6O15498 198 aa7.15□□□□□ -1.27
ATP2C1-208ENST00000504948 HIST1H1CP16403 213 aaKnown RBP7.15□□□□□ -1.27
ATP2C1-208ENST00000504948 RCC1P18754 421 aaPredicted RBP7.15□□□□□ -1.27
ATP2C1-208ENST00000504948 GDI1P31150 447 aa7.15□□□□□ -1.27
ATP2C1-208ENST00000504948 TRHRP34981 398 aaPredicted RBP7.15□□□□□ -1.27
ATP2C1-208ENST00000504948 FLT3LGP49771 235 aa7.15□□□□□ -1.27
ATP2C1-208ENST00000504948 ACTBP60709 375 aa7.15□□□□□ -1.27
ATP2C1-208ENST00000504948 SNRPGP62308 76 aaKnown RBP7.15□□□□□ -1.27
ATP2C1-208ENST00000504948 ACTG1P63261 375 aa7.15□□□□□ -1.27
ATP2C1-208ENST00000504948 GPNMBQ14956 572 aa7.15□□□□□ -1.27
ATP2C1-208ENST00000504948 RTL6Q6ICC9 239 aa7.15□□□□□ -1.27
ATP2C1-208ENST00000504948 THSD4Q6ZMP0 1018 aa7.15□□□□□ -1.27
ATP2C1-208ENST00000504948 BAP18Q8IXM2 172 aa7.15□□□□□ -1.27
ATP2C1-208ENST00000504948 ACOT4Q8N9L9 421 aa7.15□□□□□ -1.27
ATP2C1-208ENST00000504948 NUS1Q96E22 293 aa7.15□□□□□ -1.27
ATP2C1-208ENST00000504948 MRPS24Q96EL2 167 aaKnown RBP7.15□□□□□ -1.27
ATP2C1-208ENST00000504948 SLC41A2Q96JW4 573 aa7.15□□□□□ -1.27
ATP2C1-208ENST00000504948 SRMSQ9H3Y6 488 aa7.15□□□□□ -1.27
ATP2C1-208ENST00000504948 KIF25Q9UIL4 384 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms